Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20796
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0225 - 21063445-21063636,21063726-21063911,21064052-210641... 77 8e-15
07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228... 47 1e-05
12_01_0285 + 2120130-2121204,2122842-2123116 41 8e-04
11_01_0281 + 2086674-2087652,2089200-2089483 41 8e-04
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 31 0.90
03_06_0404 + 33692534-33693607 30 1.6
01_05_0597 - 23526705-23526749,23526794-23526905,23527068-235271... 29 2.7
12_01_0827 - 7662180-7662192,7662451-7662764 29 3.6
12_01_0325 + 2505988-2506560 29 3.6
11_06_0232 + 21559467-21559532,21559586-21560200 29 3.6
09_02_0211 - 5817564-5817578,5817711-5818040,5818095-5818196,581... 29 3.6
04_03_0704 + 18872899-18874191 29 3.6
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 28 4.8
05_03_0231 - 10696096-10696315,10696348-10696697 28 4.8
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32... 28 4.8
03_01_0495 - 3739489-3739848 28 4.8
02_04_0094 + 19664434-19665078 28 4.8
10_07_0072 + 12607920-12608229,12609205-12609420,12610216-126103... 28 6.3
07_03_1231 + 25047067-25047262,25047876-25048045,25048897-250490... 28 6.3
07_03_0406 + 17785046-17785408,17786411-17786479,17786764-177868... 28 6.3
06_03_0451 - 20925100-20926734 28 6.3
02_05_0359 - 28269236-28269541,28270857-28270919,28271439-282714... 28 6.3
01_06_1557 - 38231826-38233391 28 6.3
01_01_0418 - 3142659-3145622 28 6.3
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431... 27 8.4
09_02_0575 + 10845261-10847057 27 8.4
08_01_0821 + 7966587-7966832 27 8.4
07_01_0691 - 5224260-5224277,5224663-5224733,5224774-5224953,522... 27 8.4
04_04_0981 + 29912275-29912814 27 8.4
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164... 27 8.4
>02_04_0225 -
21063445-21063636,21063726-21063911,21064052-21064138,
21064589-21064648,21064984-21065052,21065684-21065837,
21066127-21066203,21066634-21066679,21067167-21067253,
21067653-21067799,21069042-21069304
Length = 455
Score = 77.4 bits (182), Expect = 8e-15
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +1
Query: 16 DAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGD 195
D V+A P P +YYFE+ + + G+ G IG + M R PGW+ +S GYHGD
Sbjct: 40 DVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQTSIGFTTENFKMRRQPGWESNSCGYHGD 99
Query: 196 DGHSFCSSGTGQPYGPTFTT 255
DG+ + G + +GP FT+
Sbjct: 100 DGYLYRGPGKSESFGPKFTS 119
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 GDVIGCGVNLVDNTCFYTKNGHHLGIAFRGLPPNLYPTVGLQTPGEVVDTNFGQQPFVFD 434
GD IG G+N F+TKNG +G + + LYPT+ + + E V NFG++PF FD
Sbjct: 120 GDTIGAGINYFSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKEPFCFD 179
Query: 435 IEDMLKELRARTRVAIDEFPL-PD 503
IE + E + + + D+ L PD
Sbjct: 180 IEGYIFEEKMKQQSVSDKLDLQPD 203
>07_03_1345 +
25919379-25920866,25921342-25921962,25922733-25922893,
25923284-25923422,25923509-25923592,25923944-25923982,
25924037-25924222,25924347-25924478,25924810-25925009,
25925294-25925498,25925618-25925944
Length = 1193
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 255 GDVIGCGVNLVDNTCFYTKNGHHLGIAFRGL-----PPNLYPTVGLQTPGEVVDTNFGQQ 419
GDVIGC +NL + +NG+ LG+AF G+ YP + L + GE NFG
Sbjct: 208 GDVIGCCINLDAGEISFYRNGNFLGVAFDGIRKVGPRKGYYPAISL-SEGERCHLNFGSH 266
Query: 420 PFVFDIE 440
PF + ++
Sbjct: 267 PFRYPVD 273
>12_01_0285 + 2120130-2121204,2122842-2123116
Length = 449
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 28 VRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDG 201
VRAT + A G +YFEV+++ G G+ +G + + +++ G+D +GY DG
Sbjct: 202 VRATRGV--AAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDG 257
>11_01_0281 + 2086674-2087652,2089200-2089483
Length = 420
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 28 VRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGVNMNRLPGWDKHSYGYHGDDG 201
VRAT + A G +YFEV+++ G G+ +G + + +++ G+D +GY DG
Sbjct: 205 VRATRGV--AAGAWYFEVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDG 260
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 30.7 bits (66), Expect = 0.90
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 537 IVCNTWCHCPARRAAGTHRWRPWSERAAPSACPRCRKRTAADRSSC 400
I+C+ CH P + + W R S C R + ++ SC
Sbjct: 350 IICHLGCHLPKNTFVQAAQCKCWKTRVGMSLCARMEQWNLLNQESC 395
>03_06_0404 + 33692534-33693607
Length = 357
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 460 ALGPGSPSMSSRCPTSRTVAPGVAHDGVDVPGAPRVLQHGAGL 588
A P P+ + P + TV VP AP VL+HGAG+
Sbjct: 8 AAAPAPPASLTLLPRTTTVIRDRERFDAAVPVAPLVLRHGAGV 50
>01_05_0597 -
23526705-23526749,23526794-23526905,23527068-23527134,
23527439-23527566,23527638-23527750,23527827-23527972,
23528419-23528525,23528667-23528873,23530878-23531129,
23531324-23531406
Length = 419
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 486 HRWRPWSERAAPSACPRCRKRTAADRSSCPRPRRASEAR 370
+RW S R P+A R +R AA SS P R+S +R
Sbjct: 64 NRWEKGSTRRVPAASERRVERCAAAVSSGPLSMRSSSSR 102
>12_01_0827 - 7662180-7662192,7662451-7662764
Length = 108
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 453 PSACPRCRKRTAADRSSCPRPRRASEA 373
P+A + R +DRS+CPRP+ A
Sbjct: 38 PTATDQVLPRQRSDRSACPRPKNGGSA 64
>12_01_0325 + 2505988-2506560
Length = 190
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 96 FRYDSNL-EVVEPTRGGYRMCCPDAGRVSVSL 4
FRYD++ +VVE TR GY + C A VS +L
Sbjct: 49 FRYDASAYDVVEVTRAGY-LSCSAASPVSAAL 79
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 584 PAPCCSTRGAPGTSTPSCATPGATVLLVGQR 492
P P TRGAP +S P TP T G+R
Sbjct: 142 PRPRARTRGAPASSFPGATTPQRTPDRRGRR 172
>09_02_0211 -
5817564-5817578,5817711-5818040,5818095-5818196,
5818616-5818915
Length = 248
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 519 CHCPARRAAGTHRWRPWSERAAPSACPR 436
C CP+R G RW W+ R P+ R
Sbjct: 28 CRCPSRLTVGAARW--WARRRQPAVVVR 53
>04_03_0704 + 18872899-18874191
Length = 430
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 587 RPAPCCSTRGAPGTSTPSCATPGATV 510
RP CS R AP +P C P A +
Sbjct: 145 RPGSSCSCRSAPMPGSPECFWPAAAI 170
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 498 AAGTHRWRPWSERAAPSACPRCRKRTAA-DRSSCPRPRRASEAR 370
A+ + R S R APSA P + R+SC P RAS AR
Sbjct: 13 ASSSSRAAAVSARRAPSASPAAAASLPSPSRASCAPPLRASAAR 56
>05_03_0231 - 10696096-10696315,10696348-10696697
Length = 189
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -1
Query: 480 WRPWSERAAPSAC-PRCRKRTA---ADRSSCPRPRRASEARL 367
W+ W S+C CR+R+A A S PR RRA+ R+
Sbjct: 88 WKDWEHGQMLSSCLMACRRRSAGAVATHRSQPRRRRATRLRV 129
>04_01_0022 +
324422-324445,324870-325265,325366-325546,325781-326072,
326389-326461,326610-326700,326815-326894,326992-327234
Length = 459
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 483 RWRPWSERAAPSACPRCRKRTAADRSSCPRPRR--ASEARLSDI 358
RWR AAP A R R+R R P P + AS A ++D+
Sbjct: 411 RWRAARAAAAPPAQTRHRRRRHGRRQQQPPPAQPAASSAAVADV 454
>03_01_0495 - 3739489-3739848
Length = 119
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 524 PGATVLLVGQRELIDGDPGPSAQLLQHVLDVENERLLTEV 405
P A+ +G R L DGD GPS + + V ER + V
Sbjct: 11 PSASPSRIGYRSLDDGDDGPSPAAVTTTVVVGKERRVFSV 50
>02_04_0094 + 19664434-19665078
Length = 214
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -1
Query: 513 CPARRAAGTHRW--RPWSERAAPSACPRC 433
CPA AAG RW PW +AC RC
Sbjct: 181 CPAAAAAGRRRWWCAPW---LVSAACRRC 206
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 587 RPAPCCSTRGAPGTSTPSCATPGATVLLV 501
+ A CS GAP P+CA G T V
Sbjct: 89 KSAAACSCAGAPAARMPTCAGGGGTAKAV 117
>10_07_0072 +
12607920-12608229,12609205-12609420,12610216-12610367,
12611554-12611833,12612037-12612239
Length = 386
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Frame = -2
Query: 581 APCCSTRGAP----GTSTPSCATPGATVLLVGQRELIDGD 474
A CC + G P T CATPG+TV G + D
Sbjct: 327 AACCGSGGEPYNFNANFTGFCATPGSTVCADGPSSSVSWD 366
>07_03_1231 +
25047067-25047262,25047876-25048045,25048897-25049030,
25049122-25049369,25049799-25049904,25049992-25050130,
25050258-25050385,25050472-25050733
Length = 460
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 563 RGAP-GTSTPSCATPGATVLLVGQRELIDGDPGPSAQLLQHVLDVENERLL 414
RG P G++T S A A +G GPS Q+L + D N+R++
Sbjct: 23 RGRPFGSTTGSGAAAAAAAAAIGDAAAPAALVGPSLQVLTALSDQNNKRIV 73
>07_03_0406 +
17785046-17785408,17786411-17786479,17786764-17786868,
17787297-17787346,17787363-17787489,17788084-17788221,
17788863-17788940,17789141-17789218,17789318-17789386,
17789720-17789803,17789895-17789981,17790364-17790459,
17790541-17790615,17790762-17790888,17791027-17791142
Length = 553
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -1
Query: 510 PARRAAGTHRWRPWSERAAPSACPRCRKRTAA 415
PAR AA T RWR + A SA P TAA
Sbjct: 35 PARLAATTSRWRRFCAAAQASAPPPPPAATAA 66
>06_03_0451 - 20925100-20926734
Length = 544
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 142 NMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTETSSDVESTWSTTRA 300
N RL WD S H CS G G G T + SD++ TW+ A
Sbjct: 43 NPRRLASWDPDSASDHCSWDGVTCSDGGGG--GGVVTELSLSDMKLTWTLPAA 93
>02_05_0359 -
28269236-28269541,28270857-28270919,28271439-28271459,
28271660-28271716,28271789-28271874,28271982-28272039,
28272176-28272311,28272799-28273073,28273564-28273602,
28274052-28274143,28274422-28274454,28275041-28275088,
28275191-28275323
Length = 448
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -1
Query: 534 VCNTWCHCPARRAAGTHRWRPWSERAAPSACPRCRKRTAAD 412
V T C R A G WR A CP C++ D
Sbjct: 396 VAATTCLSGCREAGGPWTWRESPASRAMQKCPACKRTHTGD 436
>01_06_1557 - 38231826-38233391
Length = 521
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/17 (64%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = -1
Query: 327 LNDVHSWCRS-TCCRPS 280
L++ +SWCRS T CRPS
Sbjct: 298 LDEFYSWCRSATICRPS 314
>01_01_0418 - 3142659-3145622
Length = 987
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +3
Query: 243 HVHDGDVIGCGVN--LVDNTCFYTKNGHHLGIAFRGLPPNLYPTVGLQTPGEVVDTNFGQ 416
HV D+ CG+ +D F + HL +A+ + PT+G + E+ N
Sbjct: 55 HVTSLDLGECGLESAALDPALFELTSLRHLNLAWNNFSGSHIPTIGFERLTELTYLNLSN 114
Query: 417 QPFVFDIEDMLKEL 458
F I + + L
Sbjct: 115 SKFAGQIPNTIGRL 128
>09_06_0132 -
21042653-21042873,21042950-21043027,21043106-21043167,
21043504-21043578,21043664-21043752,21043825-21043905,
21044939-21045076,21046299-21046429,21046521-21046592,
21047218-21047275,21047362-21047461,21047544-21047617,
21047701-21047836,21047913-21048137,21048211-21048446,
21048949-21049081,21049195-21049484
Length = 732
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +1
Query: 7 THRDAASVRATHPIPAACGLYYFEVRIVSKGRDGYMGIGLSAHGV-NMNRLPGWDKHSYG 183
T A S T PI CG + S +G +G+G+ + V ++ G +S+
Sbjct: 204 TSDSAQSKIVTAPIMFGCGQVQTGSFLGSAAPNGLLGLGMDSKSVPSLLASKGLAANSFS 263
Query: 184 Y-HGDDGHSFCSSG 222
GDDGH + G
Sbjct: 264 MCFGDDGHGRINFG 277
>09_02_0575 + 10845261-10847057
Length = 598
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +2
Query: 401 HELRSAAVRFRHRGHAEGAARSDQGRHR*VPAARRAGQWHQVLHTMVS 544
HELRS A R G+ EG R+ G A RR +LH S
Sbjct: 107 HELRSIAERMVRDGYIEGLIRAFGGAATAGAAGRRGPPDELLLHNWFS 154
>08_01_0821 + 7966587-7966832
Length = 81
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = -1
Query: 507 ARRA---AGTHRWRPWSERAAPSACPRC 433
ARRA G R + R AP ACPRC
Sbjct: 7 ARRAMGWCGAEEERETASRKAPGACPRC 34
>07_01_0691 -
5224260-5224277,5224663-5224733,5224774-5224953,
5226391-5227072
Length = 316
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 515 WHQVLHTMVSTYLVHH-GYCSTV 580
WHQ+ + YLVHH +CST+
Sbjct: 119 WHQLCLAELKGYLVHHQRFCSTM 141
>04_04_0981 + 29912275-29912814
Length = 179
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 587 RPAPCCSTRGAPGTSTPSCATPGATVL 507
RP PC ++ +P +S+ S A+ A V+
Sbjct: 39 RPCPCAASSSSPSSSSSSAASGSAAVV 65
>04_01_0142 +
1640472-1640611,1641618-1641744,1642233-1642425,
1642793-1643349
Length = 338
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 554 PGTSTPSCATPGATVLLVGQRELID 480
PG P A PG TVL Q+ +D
Sbjct: 85 PGVIKPDIAAPGVTVLAAAQKAFMD 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,063,555
Number of Sequences: 37544
Number of extensions: 429745
Number of successful extensions: 1661
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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