Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20796
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    26   1.0  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   1.4  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   3.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   4.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   4.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.2  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   4.2  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   4.2  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   9.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   9.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   9.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   9.7  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 181 GYHGDDGHSFCSSGTGQPYGPTFTT 255
           G  G  GH  C++ +G P+GP + T
Sbjct: 121 GLDGSTGHG-CNAKSGNPFGPFWDT 144


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 336 FRGLPPNLYPTVGLQTPGEVVDTNFGQQ 419
           F   PP L P VGLQ+   + +TN   Q
Sbjct: 404 FPPTPPQLSPGVGLQSQNNLSNTNRSPQ 431


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 203 IRFVLPVPGSPTDPXXXXXXXXMWSQLGRQHVL 301
           +RF    PG P           +W++LGRQH+L
Sbjct: 356 VRFECFQPG-PRKVSGSIMPHVLWNKLGRQHML 387


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 15/54 (27%), Positives = 20/54 (37%)
 Frame = -1

Query: 483  RWRPWSERAAPSACPRCRKRTAADRSSCPRPRRASEARLSDINLAVVL*KRFLN 322
            RWR   E    S  P    R A    + P P + S+   S   +  +L    LN
Sbjct: 1438 RWRDMEEGGRQSTPPASPARLARSSPASPTPSKKSKRHQSASPIRHILNSPLLN 1491


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 196 DGHSFCSSGTGQPYGPTFTTETSSDVE 276
           D H+  +SG+G   G   T  T++ V+
Sbjct: 340 DNHNLSNSGSGNTAGTIITPATTNSVD 366


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 457 CALGPGSPSMSSRCP 501
           C  GPGS   + RCP
Sbjct: 467 CGHGPGSDETNERCP 481


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 457 CALGPGSPSMSSRCP 501
           C  GPGS   + RCP
Sbjct: 467 CGHGPGSDETNERCP 481


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 466  GPGSPSMSSRCPTSRTVAPGVAHDGVDVPGAPRVLQH 576
            GP +PS+ S  P+  + +  +     D PGA   L H
Sbjct: 1351 GP-TPSIISHTPSLSSASGSIGPKSADQPGAAAGLHH 1386


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 581 APCCSTRGAPGTSTPSCATPGAT 513
           AP  +T  APG +T +   PG T
Sbjct: 52  APTTTTTVAPGQTTTTTVAPGQT 74


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 345 LPPNLYPTVGLQTPGEVVDTNFGQQP 422
           +PP++ PT     PG    T  G  P
Sbjct: 409 MPPSVAPTTSTVAPGTTTTTPTGANP 434


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 HVLLHQEWTSFRNRFQR 343
           +++L  EWTSF N + R
Sbjct: 15  YIVLSTEWTSFVNPWSR 31


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 HVLLHQEWTSFRNRFQR 343
           +++L  EWTSF N + R
Sbjct: 15  YIVLSTEWTSFVNPWSR 31


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 HVLLHQEWTSFRNRFQR 343
           +++L  EWTSF N + R
Sbjct: 15  YIVLSTEWTSFVNPWSR 31


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 293 HVLLHQEWTSFRNRFQR 343
           +++L  EWTSF N + R
Sbjct: 15  YIVLSTEWTSFVNPWSR 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,137
Number of Sequences: 2352
Number of extensions: 13784
Number of successful extensions: 37
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)