Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20795
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.1  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    26   1.5  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   7.8  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 292  KRPLVDLRNPGPPQHQEHET--QNPEHHEDAEKIVSSVKNDI 411
            KR  + L++   P   ++ T    P+HH++   ++  +KN +
Sbjct: 1603 KRDRIILQDESEPNTSQYSTFIHEPKHHQEDPPVLKYIKNQV 1644



 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +3

Query: 630 ASFETIESGLKSLETNFNSGLNQLSEGIQIVATFK 734
           A F  I  G     TNF SGL   +E   I A FK
Sbjct: 767 ADFGGISGGQGGYATNFGSGLTGGTESQLIGAIFK 801


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 417 CVNVIFDGRNDFFSIFVVFRILCFVLLMLRGP 322
           C   +F+G++    IF+V  ++C   L+L  P
Sbjct: 619 CKEFMFEGQDTLQVIFIVLGLICIPWLLLAKP 650


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 417 CVNVIFDGRNDFFSIFVVFRILCFVLLMLRGP 322
           C   +F+G+N+    FV   +LC   ++L  P
Sbjct: 630 CDEFMFEGQNELQRTFVFIALLCIPWMLLGKP 661


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 20  VANYIRARRTRSSIPDKVPEAEDKPLNVVENLSSEQELIDQANTIK 157
           +A+ +   R   + P +VP+    P  V E     QEL  Q  +++
Sbjct: 476 IAHPVTVPRPAITAPTRVPQTRTSPGKVFERCELAQELHRQGLSLE 521


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +1

Query: 292 KRPLVDLRNPGPP--QHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 426
           +RP+ D + PGP   Q  + + Q P       + V ++ +  N   I
Sbjct: 47  RRPVADDQQPGPSGLQRLQQQQQQPSRLTPVREAVENIPSPRNGPNI 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,955
Number of Sequences: 2352
Number of extensions: 12399
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)