Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20795
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 29 4.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.8
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 6.3
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 6.3
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 6.3
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 28 6.3
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 6.3
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 6.3
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 232
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 232
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 282 IFIRHFNVF*SLFNDGLISSTITLTGMSTTSF-LFARRLLSMSLI 151
+FIRH NVF LF +IS + L +T++F LF R LL I
Sbjct: 40 LFIRHPNVFHPLF---VISFFLVLLAHTTSNFILFFRNLLEFFFI 81
>Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 282 IFIRHFNVF*SLFNDGLISSTITLTGMSTTSF-LFARRLLSMSLI 151
+FIRH NVF LF +IS + L +T++F LF R LL I
Sbjct: 40 LFIRHPNVFHPLF---VISFFLVLLAHTTSNFILFFRNLLEFFFI 81
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 59 IPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKP 238
+P+ PE +PL VV+ + L Q I + ++ + VV+ V+V+ P
Sbjct: 126 VPESTPEPISEPLPVVQEEPASDSLTVQDEQIAQAEPAVEPEEPVVVE-HVEVVTASEDP 184
Query: 239 SLKS 250
+L+S
Sbjct: 185 TLES 188
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 232
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKD-IDNSLRANKKEVVDIPVKVIVEEI 232
P+K ED+ +E+ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 322 GPPQHQEHETQNPEHHEDAEKIVSSVKN 405
GPP HQ+H Q +H+ A SS N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 292 KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 438
+RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 378 QRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 65 DKVPEAEDKPLNVVENLSS-EQELIDQANTIKDIDNSLRANKKE 193
+++ ED+ L + E L E+EL+D+ N K++D + +E
Sbjct: 1253 NRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 522 FQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIES--GLKSLETN-FNSGL 692
F+E ++K +T+ A+ V E +N+ ETIES S +T N+GL
Sbjct: 818 FKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIESLQSQHSQDTEVINAGL 877
Query: 693 NQLSEGIQIVATFKADGEAAAES 761
+ + V + + +A E+
Sbjct: 878 RTRGDRVGYVDKLRVEKKALEET 900
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 522 FQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIES--GLKSLETN-FNSGL 692
F+E ++K +T+ A+ V E +N+ ETIES S +T N+GL
Sbjct: 818 FKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIESLQSQHSQDTEVINAGL 877
Query: 693 NQLSEGIQIVATFKADGEAAAES 761
+ + V + + +A E+
Sbjct: 878 RTRGDRVGYVDKLRVEKKALEET 900
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 594 IAAPSVEETQNKASFETIESGLKSLETNFNSGLNQLSEG 710
+ PS + T+NK I+ + L +NFN+G+ +S G
Sbjct: 215 VVLPSRKSTRNKKDMNQIKED-EELVSNFNNGIGVISRG 252
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 292 KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 438
+RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 378 QRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 522 FQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIES--GLKSLETN-FNSGL 692
F+E ++K +T+ A+ V E +N+ ETIES S +T N+GL
Sbjct: 816 FKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIESLQSQHSQDTEVINAGL 875
Query: 693 NQLSEGIQIVATFKADGEAAAES 761
+ + V + + +A E+
Sbjct: 876 RTRGDRVGYVDKLRVEKKALEET 898
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 68 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 235
K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 107 ENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSD*KTLKCRMKMR 286
E SE +L+D T D+ R +KK D K+ E+++ K K + KM
Sbjct: 88 EKKKSEDDLLDVKKTASKEDDKKRMDKK---DPSKKLSKEKLREEKKEQSKKVNKEKKMN 144
Query: 287 KSRGL 301
KS +
Sbjct: 145 KSESV 149
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 68 KVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRAN---KKEVVDIPVKVIVEEIK 235
K+ E ED+ + V+N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKK 396
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 331 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQA 510
+HQ+HE Q + E+AEK + +K D+ EI + V + + K R E A
Sbjct: 567 EHQKHEDQT-DKSEEAEKKM-KIKADLAAKEIWDKNMEHNVDEILMKRVNRVEMCRIQMA 624
Query: 511 ACNISKKI 534
N+ +K+
Sbjct: 625 LQNLDQKL 632
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,350,071
Number of Sequences: 27780
Number of extensions: 278287
Number of successful extensions: 1288
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -