Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20790
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    26   0.96 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   5.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   6.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.0  

>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 530 IFRYAESEPYHHEQQTMLDLDAQTTKTDCTPQI 628
           + +YA + P H +Q++M DL  Q  ++  +P +
Sbjct: 186 LLKYAWALPMHKKQRSMYDLIGQLVQSSKSPML 218


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +1

Query: 82  TTSAPTRLDDF-QVFRRGNASHIYGNYYSNPSYDA 183
           T   P + D   Q FR+      + NYY NP Y A
Sbjct: 378 TDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVA 412


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 608 TDCTPQIINQTTRHYCKDLADSS 676
           T  T Q++NQTT   C   ADS+
Sbjct: 418 TMLTSQMLNQTTSLCCASPADSN 440


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 452 DRVHAWMGHPL 420
           +RVHAWM H L
Sbjct: 687 ERVHAWMRHHL 697


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,115
Number of Sequences: 2352
Number of extensions: 15512
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)