Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20789
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.28 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    26   0.28 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.64 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.0  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.6  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   2.6  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 640 FFFSTATWICVTM*SFYRIRQLFQAFNKLFHFISRC 533
           F +   TWIC  +    +  +L + F +L HF ++C
Sbjct: 86  FAYLETTWICTLL----KKDKLLELFKRLIHFDTKC 117


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 640 FFFSTATWICVTM*SFYRIRQLFQAFNKLFHFISRC 533
           F +   TWIC  +    +  +L + F +L HF ++C
Sbjct: 104 FAYLETTWICTLL----KKDKLLELFKRLIHFDTKC 135


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +3

Query: 228 QSKRIHEGVYVNER--RLQRDFMRSNYTNRPK 317
           Q+ R +   +  E+  RL+++F + NY +RP+
Sbjct: 69  QNIRRYRTAFTREQLARLEKEFFKENYVSRPR 100


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 495 DVDKPQKIILKIQHLEIKWNSLLKAWN 575
           DVD+  +I+     L ++WN     WN
Sbjct: 42  DVDEKNQILTTNAWLNLEWNDYNLKWN 68


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 495 DVDKPQKIILKIQHLEIKWNSLLKAWN 575
           DVD+  +I+     L ++WN     WN
Sbjct: 42  DVDEKNQILTTNAWLNLEWNDYNLKWN 68


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 495 DVDKPQKIILKIQHLEIKWNSLLKAWN 575
           DVD+  +I+     L ++WN     WN
Sbjct: 42  DVDEKNQILTTNAWLNLEWNDYNLKWN 68


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 495 DVDKPQKIILKIQHLEIKWNSLLKAWN 575
           DVD+  ++++    L ++WN     WN
Sbjct: 42  DVDEKNQLLITNIWLSLEWNDYNLKWN 68


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 495 DVDKPQKIILKIQHLEIKWNSLLKAWN 575
           DVD+  ++++    L ++WN     WN
Sbjct: 42  DVDEKNQLLITNIWLSLEWNDYNLKWN 68


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 273 LQRDFMRSNYTNRPKNI 323
           L+R+F RS Y  RP+ I
Sbjct: 100 LEREFHRSKYLCRPRRI 116


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 273 LQRDFMRSNYTNRPKNI 323
           L+R+F RS Y  RP+ I
Sbjct: 120 LEREFHRSKYLCRPRRI 136


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 228 QSKRIHEGVYVNERRLQRDFMRSNYTNRPKN 320
           +S R++  V+   R+L  DF+  N    PK+
Sbjct: 71  ESLRLYPSVHFISRKLGEDFVTCNGLKLPKS 101


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 65  EEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEPQ 181
           ++ ++  QL+++  E D+Q+  Q     + S  I  EP+
Sbjct: 356 QKYHDPSQLLRHVEESDKQRTHQPFLLNIPSEGIKVEPR 394


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 131 QSATSPVTSNKISSEPQV*HQK 196
           QS T P+T  +I    Q+ H+K
Sbjct: 183 QSRTRPITPKEIERMVQIIHKK 204


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 269 SFIYVDTFVDSFRL 228
           SF ++ +FVD FRL
Sbjct: 218 SFFFMPSFVDIFRL 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,070
Number of Sequences: 336
Number of extensions: 3976
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)