Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20789
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.56
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 25 0.75
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 5.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.0
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 7.0
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.56
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 495 DVDKPQKIILKIQHLEIKWNSLLKAWN 575
DVD+ ++++ L+++WN + WN
Sbjct: 62 DVDEKNQLLITNLWLKLEWNDVNMRWN 88
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 25.0 bits (52), Expect = 0.75
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 62 LEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKIS 169
LEE + +L+ E E+ + + SP+T N+I+
Sbjct: 23 LEETQQALELINLENFFPEENVVEELLSPLTLNRIT 58
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 524 ENSASRDKMEQLVKSLEQLSNSIERLHCDTNPC 622
E + S DK E + S+ +S +++RLH +T+PC
Sbjct: 691 EQTESDDK-EGYLHSV--VSGALDRLHYETDPC 720
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +3
Query: 117 NKRYHKVRLRLSRVIRYQANRKFNIKKS*KSTHQYW*QSKRIHEGVYVNERRLQRDFMRS 296
++RY K+ +++ + NRK N + + + Y +++R + + RD
Sbjct: 15 DRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSY--KNEREYRKYRETSKERSRDRTER 72
Query: 297 NYTNRPKNI 323
+ PK I
Sbjct: 73 ERSREPKII 81
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +3
Query: 117 NKRYHKVRLRLSRVIRYQANRKFNIKKS*KSTHQYW*QSKRIHEGVYVNERRLQRDFMRS 296
++RY K+ +++ + NRK N + + + Y +++R + + RD
Sbjct: 15 DRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSY--KNEREYRKYRETSKERSRDRAER 72
Query: 297 NYTNRPKNI 323
+ PK I
Sbjct: 73 ERSREPKII 81
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3
Query: 294 SNYTNRPKNIPKETPDVKNMEKALLELLDDFH 389
S Y+ P +PK P K + L D H
Sbjct: 370 STYSGSPTELPKHLPTSLTKSKMEVMELSDLH 401
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 43 IFNLKNSKLPKHAK 2
+F+LKNSKL K K
Sbjct: 156 VFDLKNSKLLKQVK 169
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 151 DRRSRTLWYLLFVIFTFI 98
DRRSR ++ + F+IF +
Sbjct: 445 DRRSRIVFPVAFIIFNIL 462
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 542 DKMEQLVKSLEQLSNSIERLHCDTNPCSSTE 634
D+ QL+ +LE + ++RL +TN + E
Sbjct: 363 DQHSQLIDTLENVLAIVDRLMDETNQLTLQE 393
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 542 DKMEQLVKSLEQLSNSIERLHCD 610
DKM+ LV+ L+ + L CD
Sbjct: 42 DKMKTLVEELKSKPGKLVPLQCD 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,676
Number of Sequences: 438
Number of extensions: 4274
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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