Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20787
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.64 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.9  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   5.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   5.9  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 251 AVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 135
           A ILT+TSP      + +S  S   +   TAA HL   P
Sbjct: 148 APILTKTSPTPVSINNNTSTSSSASSPSVTAAPHLRDSP 186


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 276 TRQYGRLRGRDLNAHFTGFWRVHFNLLD 193
           T  Y     R +NAH +G   V  NLLD
Sbjct: 46  TEIYSVYERRYMNAHLSGIQLVVRNLLD 73


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 664 TCRYTASQQTNFI*WSSLCNFT 599
           +CRYTA    N     S+ N+T
Sbjct: 50  SCRYTAGLAANVTPADSMVNYT 71


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 664 TCRYTASQQTNFI*WSSLCNFT 599
           +CRYTA    N     S+ N+T
Sbjct: 109 SCRYTAGLAANVTPADSMVNYT 130


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 664 TCRYTASQQTNFI*WSSLCNFT 599
           +CRYTA    N     S+ N+T
Sbjct: 50  SCRYTAGLAANVTPADSMVNYT 71


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 664 TCRYTASQQTNFI*WSSLCNFT 599
           +CRYTA    N     S+ N+T
Sbjct: 109 SCRYTAGLAANVTPADSMVNYT 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,037
Number of Sequences: 336
Number of extensions: 3896
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)