Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20786
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    90   2e-18
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    71   1e-12
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    45   4e-05
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    38   0.009
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    37   0.011
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.081
AF047657-13|AAY86196.1|  143|Caenorhabditis elegans Hypothetical...    31   0.75 
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    30   1.3  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 3   ANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKED 182
           A VK LK  P++ +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G +K+D
Sbjct: 10  ATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGLAKDD 68

Query: 183 AQKAYIEIVEGLIASIG 233
           AQKAY+ +VE LIA  G
Sbjct: 69  AQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +3

Query: 6   NVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDA 185
           N+K LK  P +   L LY  FKQAT GD     RPG++D  G+AK+DAW+ L G ++++A
Sbjct: 35  NLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQTQDEA 93

Query: 186 QKAYIEIVEGLIA 224
           +  Y ++V GLI+
Sbjct: 94  RANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 41/63 (65%)
 Frame = +3

Query: 42  QLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 221
           Q L  Y+ FKQA++GD +  +RPG+  +  + K+D+W +L G S+++A++ YI+ +  + 
Sbjct: 29  QKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMF 87

Query: 222 ASI 230
             I
Sbjct: 88  DKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +3

Query: 48  LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 227
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 228 IGLKE*KT 251
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +3

Query: 9   VKNLKALPTDAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKLAGTSKED 182
           ++ LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW    G + E 
Sbjct: 22  MRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQKGANSEK 81

Query: 183 AQKAYIEIVEGLIASIG 233
            +  Y+ I E +I   G
Sbjct: 82  CRADYVAIAEEMIKKYG 98


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +3

Query: 48  LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIE 203
           L +Y+ +KQAT G  D   +P    ++ + K++AW++L    + +A+  Y+E
Sbjct: 33  LQMYSLYKQATSGKCDTI-QPYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 45  LLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 224
           +L  Y  +KQA  G AD    P   +   + KF++W   +  S+  A +AY E++  L  
Sbjct: 51  ILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDT 110

Query: 225 S 227
           S
Sbjct: 111 S 111


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.081
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 123 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 218
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>AF047657-13|AAY86196.1|  143|Caenorhabditis elegans Hypothetical
           protein F37B4.14 protein.
          Length = 143

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 341 LMRDDDAKNRAYLYSTLDNENYHVLASLKLSLLFFEADGSYETF 210
           L+  +++    +L  + +N  +++LA LKL + FF +DG Y  F
Sbjct: 36  LLFSNNSYEHHHLSRSSNNVGWNILAILKLHITFFFSDGDYHYF 79


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 48  LNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVE 212
           + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+++A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,487,874
Number of Sequences: 27780
Number of extensions: 283107
Number of successful extensions: 687
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)