BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20786 (675 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 59 2e-09 At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 45 4e-05 At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 42 4e-04 At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 33 0.13 At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 33 0.13 >At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical to acyl-CoA-binding protein (ACBP) [Arabidopsis thaliana] SWISS-PROT:P57752 Length = 92 Score = 59.3 bits (137), Expect = 2e-09 Identities = 30/71 (42%), Positives = 42/71 (59%) Frame = +3 Query: 9 VKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQ 188 V L LP++ LL LY +KQA G D +RPG+ +K +AK+DAW + G S E+A Sbjct: 14 VNTLTELPSNEDLLILYGLYKQAKFGPVD-TSRPGMFSMKERAKWDAWKAVEGKSSEEAM 72 Query: 189 KAYIEIVEGLI 221 YI V+ L+ Sbjct: 73 NDYITKVKQLL 83 >At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) identical to acyl-CoA binding protein 2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057 Length = 354 Score = 45.2 bits (102), Expect = 4e-05 Identities = 26/64 (40%), Positives = 35/64 (54%) Frame = +3 Query: 27 LPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEI 206 +P+D Q LY +K AT G A +P L + +AK+ AW KL E+A + YIEI Sbjct: 127 VPSDVQQ-QLYGLYKIATEGPCT-APQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEI 184 Query: 207 VEGL 218 V L Sbjct: 185 VTQL 188 >At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP, putative similar to acyl-CoA binding protein 2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057 Length = 338 Score = 41.9 bits (94), Expect = 4e-04 Identities = 22/57 (38%), Positives = 31/57 (54%) Frame = +3 Query: 48 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 218 L LY +K AT G A +P L + +AK+ AW KL E+A + YI++V L Sbjct: 123 LQLYGLYKIATEGPCT-APQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQL 178 >At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium discoideum); contains Pfam profiles PF00887: Acyl CoA binding protein, PF01344: Kelch motif Length = 669 Score = 33.5 bits (73), Expect = 0.13 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +3 Query: 3 ANVKN-LKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKE 179 ++ KN + P D LL LYA ++QATVG + +P ++K+ +W L Sbjct: 30 SSAKNVISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTMPSI 87 Query: 180 DAQKAYIEIVE 212 +A + +++I+E Sbjct: 88 EAMRLFVKILE 98 >At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium discoideum); contains Pfam profiles PF00887: Acyl CoA binding protein, PF01344: Kelch motif Length = 668 Score = 33.5 bits (73), Expect = 0.13 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +3 Query: 3 ANVKN-LKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKE 179 ++ KN + P D LL LYA ++QATVG + +P ++K+ +W L Sbjct: 30 SSAKNVISKFPDDTALL-LYALYQQATVGPCN-TPKPSAWRPVEQSKWKSWQGLGTMPSI 87 Query: 180 DAQKAYIEIVE 212 +A + +++I+E Sbjct: 88 EAMRLFVKILE 98 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,476,079 Number of Sequences: 28952 Number of extensions: 255852 Number of successful extensions: 597 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 587 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 595 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1432596384 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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