Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20783
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 4e-42
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 117 9e-27
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 86 2e-17
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 84 1e-16
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 81 1e-15
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 71 1e-12
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 66 2e-11
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 58 8e-09
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 49 3e-06
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 49 3e-06
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 49 5e-06
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 48 1e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 46 4e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 45 7e-05
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 45 7e-05
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 45 7e-05
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 44 1e-04
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 4e-04
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 42 4e-04
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 41 0.001
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 41 0.001
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 38 0.009
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 36 0.026
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 36 0.026
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 36 0.035
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.035
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 36 0.046
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 36 0.046
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 36 0.046
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 35 0.061
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 34 0.11
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 34 0.14
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.24
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 33 0.24
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 33 0.32
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 33 0.32
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 32 0.43
SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5) 32 0.56
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 32 0.56
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 0.99
SB_6486| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 31 1.3
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 30 1.7
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 1.7
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 30 1.7
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 30 2.3
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 29 4.0
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 28 7.0
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 7.0
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 7.0
SB_55623| Best HMM Match : ResIII (HMM E-Value=0.17) 28 9.2
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 28 9.2
SB_33077| Best HMM Match : R3H (HMM E-Value=0.38) 28 9.2
SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 28 9.2
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 168 bits (409), Expect = 4e-42
Identities = 76/89 (85%), Positives = 82/89 (92%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
EDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR
Sbjct: 5988 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRM 6047
Query: 435 DPATINELRKMKQEPVKPQEGRAMAKRLT 521
D T EL+KMKQEPVK +EGRAMA +++
Sbjct: 6048 DENTKRELQKMKQEPVKIEEGRAMADKIS 6076
Score = 135 bits (327), Expect = 3e-32
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +1
Query: 67 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 246
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 5984
Query: 247 AGQK 258
AGQ+
Sbjct: 5985 AGQE 5988
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +2
Query: 509 EKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 640
+KI+A+AYLECSAK+K+GVREVFETATRAALQ KKKKK +C LL
Sbjct: 6073 DKISAYAYLECSAKTKDGVREVFETATRAALQTKKKKKGKCVLL 6116
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 117 bits (282), Expect = 9e-27
Identities = 50/88 (56%), Positives = 62/88 (70%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
EDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H CP P +LVG + DLR+
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLRD 121
Query: 435 DPATINELRKMKQEPVKPQEGRAMAKRL 518
D TI +L K KQ+P+ + +A+ L
Sbjct: 122 DQGTIEKLSKNKQKPIAVEAAEKLAREL 149
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 258
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 458 SQNEARACETAGRPGYGEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCS 634
S+N+ + ++ A Y+ECSA +++G++ VF+ A AAL+ + +KK +C
Sbjct: 130 SKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDEAILAALEPPEPQKKKKCR 189
Query: 635 LL 640
LL
Sbjct: 190 LL 191
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 105 bits (252), Expect = 4e-23
Identities = 48/96 (50%), Positives = 63/96 (65%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
EDYDRLRPLSYP TDV L+CF + S S ENI KW PE+ H P P ILVGNK+DLR+
Sbjct: 64 EDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDLRS 123
Query: 435 DPATINELRKMKQEPVKPQEGRAMAKRLTRLHIWNA 542
+ ++P+ +EG+A+AKRL ++ N+
Sbjct: 124 AQQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENS 159
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 258
KLV+VGDG GK+ LI + + FP Y+PTVF+NY ++I +DGK + LWDTAGQ+
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQE 64
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 86.2 bits (204), Expect = 2e-17
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 431
ED+DRLRPL YP+TD+ L+CF + S EN+ +W PE+ HF P VP +LVGNKKDLR
Sbjct: 66 EDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLR 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAG 252
KL IVGDGA GKT L I + + FP Y+PT ++ D VDG + + L+D+AG
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAG 64
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
ED+D LRPL Y DV ++CFSV SP S N+ KW PE++ F P PIILVG DL++
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKD 136
Query: 435 DPATINELRKMKQEPVKPQEGRAMAKR 515
+ EL + +P+ ++ + K+
Sbjct: 137 CYKILTELSQQDSQPISVKKAEGLVKK 163
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 258
K VIVGDG GKT LL+ + D FP YVPT F+ Y +EV+ K + DTAGQ+
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQE 77
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
EDYD +RPLSY + D++L+CF + P + ++I EKW EV CPN P++LVG K+DLR+
Sbjct: 291 EDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRS 350
Query: 435 DPATINEL-RKMKQEPVKPQEGRAMAK 512
+ +++L K+ Q+PV E A K
Sbjct: 351 EVNIVSKLASKVCQQPVTSLEVPAELK 377
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +1
Query: 64 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 243
P IR +++VGD CGKT LL + ++QF E Y TVF + +EVDG+++EL LWD
Sbjct: 227 PNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWD 286
Query: 244 TAGQK 258
T+G +
Sbjct: 287 TSGHE 291
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +2
Query: 509 EKINAFAYLECSAKSKE-GVREVFETATRAAL-QVKKKKKTR 628
++I A Y+ECS+K+ + + +VFE T AA+ ++ +K+R
Sbjct: 444 DRICALDYIECSSKTMDFQLEKVFEMTTLAAINKLNNHRKSR 485
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 80.6 bits (190), Expect = 1e-15
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +3
Query: 258 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 437
D +LRPL Y DTDV ++CF + +P S +N+ W PE+KH+ P P+++VGNKKD+R +
Sbjct: 81 DLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPVLVVGNKKDMRTN 140
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +1
Query: 79 RKKLVIVGDGACGKTCLLI-VFSKDQFP-EVY------VPTVFENYVADIEVDGKQVELA 234
R KL +VGD GKTC+L F + Q P +VY +P V E++ + D +
Sbjct: 8 RLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVT 67
Query: 235 LWDT 246
WDT
Sbjct: 68 YWDT 71
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 PGYGEKINA---FAYLECSAKSKEGVREVFETATRAALQVKKKKKT 625
P GE++ A Y E S + EG+REV TA R A+Q + + +T
Sbjct: 210 PSKGEELAARLGTVYRESSGYTGEGIREVVGTAVRLAVQHRLQTQT 255
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +3
Query: 261 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG---NKKDLR 431
YD+LR YPDTDV L+CFSV SL+++ +W PE++ FCP P +L+G N + L
Sbjct: 128 YDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRWVPELRRFCPVTPFLLIGTHINWRLLS 187
Query: 432 ND-PATINELRKMKQEPVKPQEGRAMAKR 515
D ATI+ R+ P+ P+ G A++
Sbjct: 188 EDRAATIDPARR----PIFPETGAMYAEK 212
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 66.9 bits (156), Expect = 2e-11
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +3
Query: 198 RHRSGWKTSGTGSVGYR-WPE--DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTP 368
R R+ + G SV R W D+ R +Y + VI++CF++++P S +++ W P
Sbjct: 71 RDRANFTIDGV-SVSLRLWDTFGDHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYP 129
Query: 369 EVKHFCPNVPIILVGNKKDLRND-----PATINELRKMKQE--PVKPQEGRAMAKRLTRL 527
E+K +CP VPIILVG K D R+ L K +E V P GR +AK + +
Sbjct: 130 EIKKYCPRVPIILVGTKSDWRSQLNVSVVCQNTSLSKRMRECFLVSPDMGRQVAKEIDAV 189
Query: 528 H 530
+
Sbjct: 190 Y 190
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 258 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 431
+YDRLRPL+Y +D+IL+CF + + + E I KW PE P +L+GNK D+R
Sbjct: 64 EYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDIR 121
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 243
MA+ RK K+V+ GD GKT LI ++++ PT F NY +EV ++ L LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELGLEVGSQKFLLDLWD 58
Query: 244 TAG 252
T G
Sbjct: 59 TEG 61
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 360 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAKRL 518
W PEV H CPN PI+LVG K DLR+D TI++L++ K P+ +G MAK +
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPIGYTQGLQMAKEI 628
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 258
K+++VGD GKTCL+ F+K FP PT+ ++ + ++VDG++V+L +WDTAGQ+
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQE 67
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3
Query: 285 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 437
+ DTDV +CFSV DS ++ KW EVK+ PN PII+VG K DLR +
Sbjct: 86 FSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDLREN 136
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLI--VFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 243
++VI+GD GKTCLL+ + + ++ ++ NYVA+I VDGK +L L D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCD 74
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 258
KL+++GD GK+ LL+ F+ D F Y+ T+ ++ + + VDGK ++L +WDTAGQ+
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 428
E + L Y I++ + V+ ++ ++ + W EV + C V ILVGNK DL
Sbjct: 68 ERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTILVGNKCDL 125
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +3
Query: 264 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 419
D +RPL+Y D+ ++CF V + S EN+ KW PE++ + VP++LVG K
Sbjct: 87 DYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQK 258
K++I+GD GKTCL +FPE T+ + + +E++G+ V+L LWDTAGQ+
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 285 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKH--FCPNVPIILVGNKKDL 428
Y + + ++ + + S E + W E +H + +VP IL+GNK DL
Sbjct: 117 YRNVNAVVFMYDITRKCSFEALTT-WIVEYRHHAYSGDVPKILIGNKCDL 165
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 252
K+V++G G GK+ L + F QF E Y PT+ + Y +IEVD L + DTAG
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAG 60
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 258
KL+I+G+ A GKT L ++ D F +V TV ++ V + + K+V+L +WDTAGQ+
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQE 81
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 258
K++IVG+ GK+ LL+ F+ D F P++ + V + V+G + +LA+WDTAGQ+
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQK 258
K++++GD GK+ L+ F D+F T+ + ++ D ++DGK+V+L LWDTAG++
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 258
KLV+VG G GK+ L I F + F Y PT+ ++Y +D + L + DTAGQ+
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQE 70
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 252
K+V VGD GKT L + FP ++ ++F+ Y +E+DGK+ + L DT G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPG 66
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 300 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 431
V L+CF + + +S NI W P V +VP +LVGNK +LR
Sbjct: 83 VFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELR 126
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQK 258
K+V++GD GK+ LL F++++F T+ + I+V+GK ++ +WDTAGQ+
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 354 EKWTPEVK-HFCPNVPIILVGNKKDLRN 434
E+W EV+ H P + ++LVGNK DL++
Sbjct: 104 ERWLLEVREHADPTIVVMLVGNKCDLKH 131
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 252
K+ I+G G GKT LL F +F E +VPTV + ++ + +DG + DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAG 69
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +1
Query: 49 PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGK-Q 222
P P + +++++GD GK+ LL F++ QF E PTV + +V +E+ G +
Sbjct: 3 PARMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVR 62
Query: 223 VELALWDTAGQK 258
++L +WDTAGQ+
Sbjct: 63 IKLQIWDTAGQE 74
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
E+Y+ L Y ++ V+L+ +S+D PDSL + E T + P I+LV NK DL N
Sbjct: 10 EEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE-CTQSAQVNAPAAKIVLVANKMDLPN 68
Query: 435 DPATINELRKMKQEP 479
+LR + P
Sbjct: 69 YRRLETDLRVKEMFP 83
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQK 258
KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQ+
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDL 428
E Y L P+ Y ++ + + + D+ + W E+ + PN+ I L GNK DL
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDITNQDTFARA-KTWVKELQRQASPNIVIALSGNKADL 138
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
E+Y+ L Y ++ V+L+ +S+D PDSL + E T + P I+LV NK DL N
Sbjct: 69 EEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE-CTQSAQVNAPAAKIVLVANKMDLPN 127
Query: 435 DPATINELRKMKQEP 479
+LR + P
Sbjct: 128 YRRLETDLRVKEMFP 142
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFP--EVYVPTVFENYVADIEVDGKQVELALWDTAGQK 258
K+ + G GKT + S D+FP E + + + ++ + + K++++ LWDT G +
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQK 258
K+V +GD GK+ L F D F E Y PT+ +++ + +D +V L +WDTAGQ+
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQE 223
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +1
Query: 82 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 255
+K+ ++G + GK+ L I F + QF + Y PT+ + +I+ G++ L L DTAGQ
Sbjct: 7 RKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQ 64
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 258
K+V +GD GK+ L F DQ+ + T+ ++ + + V+G+ + + LWDTAGQ+
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQE 956
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 22/80 (27%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFS---------------------KDQFPEVYVPTVFENY-VA 198
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 199 DIEVDGKQVELALWDTAGQK 258
IE+DGK ++L +WDTAGQ+
Sbjct: 70 TIELDGKTIKLQIWDTAGQE 89
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 303 ILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 428
I++ + V +S N+ ++W E+ + C NV +LVGNK DL
Sbjct: 105 IIVVYDVTDQESFNNV-KQWLQEIDRYACENVNKLLVGNKCDL 146
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 258
K+V+ GD A GK+ ++ +++F T+ ++ + + VDGK L LWDTAGQ+
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 297 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPATINELRKMKQ 473
D +L+ + V S ++ + W ++ C VPI+L GNK D+R A N +
Sbjct: 516 DGVLLLYDVTCETSFLDVRD-WVEAIEESCSKPVPIMLCGNKIDIRQSAAAEN------K 568
Query: 474 EPVKPQEGRAMAKRLTRLHIWNALPKARKVYVRCLK 581
+ + G +AK L I + + + + C++
Sbjct: 569 TVITAESGSRLAKEHGALFIETSSKENKNIAEACIE 604
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 255
K+VI+G+ GK+ L + F +F Y T+ Y D EV G+ V + L DTAG+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGE 919
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 360 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 479
W PE+K CP VP +L+G K DLR D A + EP
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEP 40
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 509 EKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKT 625
+ I A Y+EC AK + ++EVF+ A A L + T
Sbjct: 56 QSIGARQYVECCAKMRWNIKEVFQQAAEAILSKEDSNNT 94
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 49 PESSGPMAAI-RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 225
PE S A R KL +VGD GKT LL K EV +FE V D+ +
Sbjct: 50 PEQSDTHATSERYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDVTSGDSNL 108
Query: 226 ELALWDTA 249
E LWD++
Sbjct: 109 EFMLWDSS 116
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 434
E + LR Y ++ F V S + +N+P W +++ C N+PI+L GNK D+++
Sbjct: 92 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLERVCENIPIVLCGNKVDIKD 150
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 97 VGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQK 258
VGDG GKT + +F + Y+ T+ E + ++ +WDTAGQ+
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQE 92
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 255
++ ++GD GKT LL+ F +F Y PT+ + Y I +D V L + DTA +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASR 63
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDT 246
K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQK 258
K+++VGD GKT L+ F+K F + TV + + ++ G +V+L WDTAGQ+
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 285 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDPATIN 452
Y + D +++ F + + + +IP+ W V+ + N+ +LVGNK DL+ +N
Sbjct: 81 YRNADAVILVFDITNRGTFASIPQ-WLMNVQKYTNKNILKVLVGNKTDLKGASRKVN 136
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTA 249
K+V++GD GK+ LL ++K++F T+ E ++E++GK V +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEK 359
E+Y+ +R Y DTDV L+CF + +P SL+++ +K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 180
KL+++GD GKTC+L FS D F ++ T+
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/84 (25%), Positives = 45/84 (53%)
Frame = +1
Query: 1 RRLKKVSIKPIFRRN*PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 180
++++K+S + + + P+ S + R +V G + GKT L++ F F + Y PT+
Sbjct: 3 KKIQKISQQRELQSSSPKDS-ETSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTI 61
Query: 181 FENYVADIEVDGKQVELALWDTAG 252
+ ++ + + + EL + DT+G
Sbjct: 62 EDFFIKHVFFNNETYELQIIDTSG 85
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK-QVELALWDTAG 252
++V++G G GKT L+ F F E Y PTV + Y + + L + DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAG 165
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 261 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 428
+ ++ L+ + D ++ +SVD SL+ E V VP++LVGNK DL
Sbjct: 169 FPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 DGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQK 258
DG GK+ L+ F +F T+ ++ D+++DG+ L +WDTAGQ+
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQE 271
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-----NVPIILVGNK 419
E + LR Y +D+ L+ ++VD S N+ W E ++ N P IL+GNK
Sbjct: 271 ERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNL-SMWKKEFLYYADVRDQDNFPFILLGNK 329
Query: 420 KDL 428
D+
Sbjct: 330 VDV 332
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FE---------NYVADIEVDGKQVE 228
K + +GD GKT LL ++ F +VPT+ F N + G+++
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 229 LALWDTAGQK 258
L LWDTAGQ+
Sbjct: 168 LQLWDTAGQE 177
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.035
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 246
K+ I+G A GKT L+ K F ++PT+ + + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 252
K+V++G+ GKT L ++ F T+ ++ +++ KQV L++WDTAG
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAG 69
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 35.5 bits (78), Expect = 0.046
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 285 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 425
Y T +++ + V S D+ N+ ++W E+ C +V ILVGNK D
Sbjct: 47 YRGTHGVIVVYDVTSADTFVNV-KRWLHEIDQNCDDVIRILVGNKDD 92
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 FPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 258
F Y+ T+ ++ + I +DG++V+L +WDTAGQ+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQE 37
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 425
PL Y ++ F V S E +P W +V+ C + +P++LVGNK D
Sbjct: 40 PLIYRALSGAVIVFDVTDRKSFERVPT-WLDKVQEHCGHEIPVVLVGNKTD 89
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 192
K+V++G G GK+ L + F QF E Y PT+ + Y
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 88 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 249
LV++G GK+ LL+ F +F Y PT+ Y +D L + DTA
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA 183
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 306 LMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND-PATINELRKMKQE 476
L+ + + S ++ ++ W + + PN+ IILVGNKKDL D T E + QE
Sbjct: 172 LLVYDISSRETFNSLTN-WLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQE 229
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 202 IEVDGKQVELALWDTAGQK 258
+ V GK V+L +WDTAGQ+
Sbjct: 137 VNVGGKSVKLQIWDTAGQE 155
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 306 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 434
L+ + + + EN+ E+W E++ H N+ I+LVGNK DLR+
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 52
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 67 MAAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTV 180
M +R K+++ GD GK+ L+ VF D +P+ Y TV
Sbjct: 1 MVVLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 285 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRND 437
Y + +++ + + D+ +N+ +W +V+ + P I +LVGNKKDL +
Sbjct: 116 YRSCNGVIIAYDITKCDTFKNVI-RWGEDVQKYAPENAIKLLVGNKKDLERE 166
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 204 RSGWKTSGTGSVGYRWPEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF 383
+ G S T + E+Y +R + L F+V++ S E+I ++ ++K
Sbjct: 271 KGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI-NQYREQIKRV 329
Query: 384 --CPNVPIILVGNKKDLRNDPATINELRKM-KQEPVKPQEGRAMAKR 515
VP++LVGNK DL + ++ +++ K + QE A ++
Sbjct: 330 KDAEEVPMVLVGNKCDLPQRTVSTSDAQELAKSYNIPFQETSAKTRQ 376
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 249 WPEDYDRLRPLS---YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGN 416
W +R R ++ Y +++ + + +S N+ KW EV+ + V +ILVGN
Sbjct: 374 WEAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL-HKWLMEVETYASEGVHMILVGN 432
Query: 417 KKDLRND 437
K DL D
Sbjct: 433 KIDLDTD 439
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 70 AAIRKKLVI--VGDGACGKTCLLIVFSKDQFPEVYVPTVFE 186
+A KKL I +G+G GK+ L+ F + F E YVPT+ E
Sbjct: 22 SAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEE 62
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVP-TVFENYV--ADIEVDGKQVELALWDTAGQ 255
K +I+G+ GK+CL+ F +V TV N + D K+++L + DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 256 K 258
+
Sbjct: 412 E 412
>SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5)
Length = 144
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 67 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ---VELAL 237
MAA + + +VG G G T L + +D P V V + +++ D DG + L
Sbjct: 1 MAASARSVAVVGCGCIGITAALSILERD--PCVRVTIISDSFSPDNTTDGAAGILLPFVL 58
Query: 238 WDT 246
WDT
Sbjct: 59 WDT 61
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 88 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 255
+ ++G GK+ + +F Y P + NY +E+DG+ + L + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGK 239
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 255
+L +VG GKT + V + QF E +PTV N +V V + +WD GQ
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVSKGNVTIKVWDIGGQ 75
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 26.6 bits (56), Expect(2) = 0.99
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 211 DGKQVELALWDTAGQK 258
+G+ + L LWDTAGQ+
Sbjct: 30 NGEDIRLMLWDTAGQE 45
Score = 23.4 bits (48), Expect(2) = 0.99
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLL 132
K+V+VG+GA GK+ ++
Sbjct: 11 KVVVVGNGAVGKSSMI 26
>SB_6486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 432 NDPATINELRKMKQEPVKPQEGRAMAKRLTRLHIWNALPKARKVYVRCLKQQPEPHY 602
N PA I + P+ Q G M K L ++H + KAR V C+ PE Y
Sbjct: 105 NAPAFIPQSPSCSASPL--QSGAQMLKSLVKVHDQSCTGKARDVTSCCVMMDPEEGY 159
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +3
Query: 390 NVPIILVGNKKDLRN-----DPATINELRKMKQEPVKPQEGRAM-AKRLTRLHIWNALPK 551
+VP+++V NK+DL N D A L K+K+ P+ QE A L H W LP
Sbjct: 71 DVPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKW--LPN 128
Query: 552 AR 557
+R
Sbjct: 129 SR 130
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 431
E Y + Y ++ + + S N+ KW E++ H ++ IIL+GNK DL+
Sbjct: 3 ERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 432 N 434
+
Sbjct: 62 H 62
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-----HFCPNVPIILVGNK 419
E + + + Y D ++ F ++ +L+ KW ++ H VP ILVGNK
Sbjct: 79 ERFSSMTRVYYKGADACVVLFDLERQTTLDGAI-KWKKDLDSKYKLHSRKPVPCILVGNK 137
Query: 420 KDLRNDPATINELRKMKQE 476
DL + P + K+ +E
Sbjct: 138 SDLPDRPVDKEIIDKLCKE 156
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 177
K+VI GD GKTC+ F E Y+PT
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 431
E Y + Y ++ + + S N+ KW E++ H ++ IIL+GNK DL+
Sbjct: 3 ERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 432 N 434
+
Sbjct: 62 H 62
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 252
++ + G GKT ++ F +F E Y PTV + Y + +G + L D++G
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSG 65
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 303 ILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 437
IL+ + + + DS ++I + W ++ + PNV +L+GNK D ++
Sbjct: 5 ILLVYDITTEDSFKHISQ-WLQNIEDNASPNVCKVLLGNKLDAEDE 49
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 255 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNK 419
E + L Y D ++ F V P+S + + + W E + P N P +++GNK
Sbjct: 8 ERFQSLGVAFYRGADCCVLVFDVTQPNSFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 66
Query: 420 KDLRN 434
DL N
Sbjct: 67 IDLEN 71
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 228 FHLFSIHFDVGNVILKHCRHVYFRELIL--AEHYQQTCFTACTVTDDY*LFAYR 73
FHL +H +V + RH++ R ++ A + C TA +T D LF+ R
Sbjct: 286 FHLVGMHSNVFTRTARLPRHLFHRRKVIEFALWIRDCCITAALLTRDGCLFSAR 339
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 660 SRQQHTYSREHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANA 520
SR+ TYSR +FF L A+V + + P + HS+ A +
Sbjct: 20 SRRSSTYSRS--LFFVLLLVAVAIVVFFSQTSLPDFMKTSHSKIARS 64
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 85 KLVIVGDGACGKTCLLIVFSKDQFPEV-YVPTVFENYVAD 201
+L +VG G GK+ + I + K++F E+ Y +++ V D
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTEIDYCGKLYDIEVVD 2639
>SB_55623| Best HMM Match : ResIII (HMM E-Value=0.17)
Length = 755
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 49 PESSGPMAAIRKKLVIVGDGACGKT 123
P+ SG +AA K+ + G G GKT
Sbjct: 319 PKKSGSLAATSAKMYLAGQGGSGKT 343
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 27.9 bits (59), Expect = 9.2
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +1
Query: 214 GKQVELALWDTAGQK 258
GK+++L +WDTAGQ+
Sbjct: 2 GKKIKLQIWDTAGQE 16
>SB_33077| Best HMM Match : R3H (HMM E-Value=0.38)
Length = 332
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 414 NKKDLRNDPATINELRKMKQ-EPVKPQEGR 500
NK+DLR+ T+N++RK K+ P + EG+
Sbjct: 296 NKRDLRSIEETLNDIRKRKRHRPNEDGEGQ 325
>SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = -2
Query: 586 CCFKHLTYTFLAFGRAFQICKRVNLFAIARPSCGFTGS 473
C +KH+TYT G+++++ +R+ ++++ G TG+
Sbjct: 143 CDWKHITYTSKVQGQSYEVIRRL-VYSMRTLGKGHTGA 179
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 79 RKKLVIVGDGACGKTCLLIVFSK 147
+K LV+ GD CGKT L+ + +K
Sbjct: 383 QKPLVLYGDSGCGKTSLVAMTAK 405
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +3
Query: 393 VPIILVGNKKDLR 431
+PI+LVGNK+DLR
Sbjct: 71 IPIVLVGNKRDLR 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,936,888
Number of Sequences: 59808
Number of extensions: 513860
Number of successful extensions: 1663
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -