Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20782
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    30   0.017
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    24   1.1  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   4.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 0.017
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 530 VIKCVNQRFEKGSFFWNTPFKLEGNKYKLLFTY 432
           ++K V+ R +KG  FW +PF +    +  + TY
Sbjct: 381 ILKTVSNRNDKGDIFWFSPFLVANLAFVTIVTY 413


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 300 LKNVILCPYGFNPSAE*LVASRR 232
           ++  +LCP   NP  E LV+++R
Sbjct: 7   IRKFVLCPECENPETELLVSTKR 29


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 45  NNIKESRRVLLIKLIHKYNP 104
           NNI +     ++  +HKY P
Sbjct: 81  NNISDKHGFTILNSMHKYQP 100


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 384 MLAKAQILYHIQCIKPGNSFGPYS 313
           +L+  + L+H +C KP   + P S
Sbjct: 25  VLSSDEELFHQKCPKPAPIYSPVS 48


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 72  LLIKLIHKYNPTV 110
           +++  +HKY PTV
Sbjct: 144 IMLNSLHKYKPTV 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,109
Number of Sequences: 336
Number of extensions: 2512
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)