Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20782
         (590 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26446-1|AAA67690.1|  477|Homo sapiens protoporphyrinogen oxidas...    95   2e-19
D38537-1|BAA07538.1|  477|Homo sapiens protoporphyrinogen oxidas...    95   2e-19
BC002357-1|AAH02357.1|  477|Homo sapiens protoporphyrinogen oxid...    95   2e-19
AY032687-1|AAK50376.1|  205|Homo sapiens protoporphyrinogen oxid...    95   2e-19
AL590714-4|CAH72144.1|  477|Homo sapiens protoporphyrinogen oxid...    95   2e-19

>U26446-1|AAA67690.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 253 LGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRM 429
           LGGWI+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR 
Sbjct: 39  LGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRF 98

Query: 430 IYVNNNLYLLPSSLKGVFQKNEPFSK 507
           +YV   L+ LP+ L+G+ + + PFSK
Sbjct: 99  LYVGGALHALPTGLRGLLRPSPPFSK 124


>D38537-1|BAA07538.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 253 LGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRM 429
           LGGWI+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR 
Sbjct: 39  LGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRF 98

Query: 430 IYVNNNLYLLPSSLKGVFQKNEPFSK 507
           +YV   L+ LP+ L+G+ + + PFSK
Sbjct: 99  LYVGGALHALPTGLRGLLRPSPPFSK 124


>BC002357-1|AAH02357.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 253 LGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRM 429
           LGGWI+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR 
Sbjct: 39  LGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRF 98

Query: 430 IYVNNNLYLLPSSLKGVFQKNEPFSK 507
           +YV   L+ LP+ L+G+ + + PFSK
Sbjct: 99  LYVGGALHALPTGLRGLLRPSPPFSK 124


>AY032687-1|AAK50376.1|  205|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 205

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 253 LGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRM 429
           LGGWI+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR 
Sbjct: 39  LGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRF 98

Query: 430 IYVNNNLYLLPSSLKGVFQKNEPFSK 507
           +YV   L+ LP+ L+G+ + + PFSK
Sbjct: 99  LYVGGALHALPTGLRGLLRPSPPFSK 124


>AL590714-4|CAH72144.1|  477|Homo sapiens protoporphyrinogen oxidase
           protein.
          Length = 477

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 253 LGGWIKSIRTKD-YVFEQGPRTIRPKGVTGLNTLNMIQDLGLSEHISPIKPDHPAARNRM 429
           LGGWI+S+R  +  +FE GPR IRP G  G  TL ++ +LGL   + P++ DHPAA+NR 
Sbjct: 39  LGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRF 98

Query: 430 IYVNNNLYLLPSSLKGVFQKNEPFSK 507
           +YV   L+ LP+ L+G+ + + PFSK
Sbjct: 99  LYVGGALHALPTGLRGLLRPSPPFSK 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,919,835
Number of Sequences: 237096
Number of extensions: 1505899
Number of successful extensions: 2251
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2246
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)