Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20781
(491 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 120 1e-26
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 98 8e-20
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 92 5e-18
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 92 7e-18
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 83 2e-15
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 81 1e-14
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 78 1e-13
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 73 3e-12
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 71 1e-11
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 71 1e-11
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 70 3e-11
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 66 4e-10
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 65 7e-10
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 64 1e-09
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 64 2e-09
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 60 2e-08
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 60 2e-08
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 54 2e-06
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 42 0.007
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 42 0.010
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 41 0.013
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 40 0.023
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 40 0.023
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 40 0.040
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 39 0.070
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 38 0.12
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 38 0.16
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 38 0.16
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 37 0.21
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 37 0.21
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 37 0.21
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 37 0.21
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 37 0.21
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.28
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 36 0.37
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 36 0.65
UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole ge... 34 1.5
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 33 2.6
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 33 2.6
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 33 3.5
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 33 4.6
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 33 4.6
UniRef50_Q0BVI8 Cluster: Cytochrome c-type biogenesis protein cc... 32 8.0
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 32 8.0
UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces cere... 32 8.0
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 32 8.0
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 32 8.0
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 120 bits (290), Expect = 1e-26
Identities = 58/84 (69%), Positives = 67/84 (79%)
Frame = +2
Query: 2 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 181
KKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+K+LR+AKKEA
Sbjct: 8 KKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEA 67
Query: 182 PPNEKPEIVKTHLRNMIIVPEMVG 253
PP EKPE+VKTHLR+MII+PEMVG
Sbjct: 68 PPMEKPEVVKTHLRDMIILPEMVG 91
Score = 116 bits (279), Expect = 3e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 93 MVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 98.3 bits (234), Expect = 8e-20
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 181
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 182 PPNE--KPEIVKTHLRNMIIVPEMVG 253
KPE+VKTHLRNMIIVPEM+G
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVPEMIG 102
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA----THSSRFIPLK 414
+VG++NGK FN++ IKPEMIGHYL EFS+T K V H RP I S+RFIPL+
Sbjct: 104 VVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 92.3 bits (219), Expect = 5e-18
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +2
Query: 2 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 181
KKR+F+ +YRGVDL++LL+M E ++L G+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 182 PPNEKPEIVKTHLRNMIIVPEMVG 253
P NEKP V+TH+RNMIIVPEM+G
Sbjct: 68 PENEKPAPVRTHMRNMIIVPEMIG 91
Score = 88.6 bits (210), Expect = 7e-17
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+HGR GAT +SRFIPLK
Sbjct: 93 VVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGR--AGAT-TSRFIPLK 142
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 91.9 bits (218), Expect = 7e-18
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKPMALVKKLR 163
KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK +L+K+LR
Sbjct: 21 KKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQRSLLKRLR 80
Query: 164 RAKKEAPPNEKPEIVKTHLRNMIIVPEMVG 253
+AKK APP EKPE+VKTH R+++++P MVG
Sbjct: 81 KAKKGAPPTEKPEVVKTHPRDVLLLPAMVG 110
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 83.4 bits (197), Expect = 2e-15
Identities = 33/50 (66%), Positives = 44/50 (88%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGATHSSRFIPL+
Sbjct: 102 VYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGATHSSRFIPLR 151
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 81.0 bits (191), Expect = 1e-14
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH PG+GAT SS+F+PLK
Sbjct: 99 IVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
Score = 37.9 bits (84), Expect = 0.12
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +2
Query: 17 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 196
++FTY+G L+ L M E+L++++ L R+P KKL K E+ +
Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKILPARARRT----LLREPNYEQKKLME-KLESDEED- 81
Query: 197 PEIVKTHLRNMIIVPEMVG 253
VKTH+R++II+P VG
Sbjct: 82 ---VKTHVRDVIILPNYVG 97
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 77.8 bits (183), Expect = 1e-13
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
L +Y G+ F +VE++PEMIGHYLGEF +T V+HG+ GIGAT SS+F+PLK
Sbjct: 87 LTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
Score = 49.6 bits (113), Expect = 4e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 20 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 199
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 200 EIVKTHLRNMIIVPEMVG 253
++THLR+M ++PE VG
Sbjct: 71 --IRTHLRDMPVLPEFVG 86
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 72.9 bits (171), Expect = 3e-12
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS F+ +K
Sbjct: 90 VYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/80 (37%), Positives = 50/80 (62%)
Frame = +2
Query: 14 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNE 193
++KF YRG LD+LL+MP ++ ++L+ G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GK 65
Query: 194 KPEIVKTHLRNMIIVPEMVG 253
+ +KTH+R+MII+PEMVG
Sbjct: 66 YSKTIKTHVRDMIILPEMVG 85
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/52 (63%), Positives = 37/52 (71%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
V +YNGK + V+IKPEMIGHYLGEFS T K KH PGIGAT SS + K
Sbjct: 89 VHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
Score = 39.1 bits (87), Expect = 0.053
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +2
Query: 17 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEK 196
++F Y+G L +L M E+L ++M LK KKL + A +
Sbjct: 8 KEFRYKGYTLQELEQMSLEELAKIMPARQRRTLLRRLKFGWSDQQKKLFKKILLAKEGKY 67
Query: 197 PEIVKTHLRNMIIVPEMVG 253
+ +KTH RN II+P MVG
Sbjct: 68 KKPIKTHARNTIILPFMVG 86
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 70.9 bits (166), Expect = 1e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+ V +YNG+ F VEIKP M+G L E+S++YK V HG+ GIGAT SS+F+PL+
Sbjct: 92 MTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFVPLR 145
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 KKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE 178
++R + +RGV++++L M + L +L GL K + V KLR ++
Sbjct: 8 RRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR-LRRA 66
Query: 179 APPNEKPEIVKTHLRNMIIVPEMVG 253
A P++KP+IV+THLR+MII PEM+G
Sbjct: 67 AQPSQKPKIVRTHLRDMIIFPEMIG 91
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+ + ++NGK F VE++PEMIGH GEF+ T V HG G+GAT SS+F+PLK
Sbjct: 83 IAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKFVPLK 136
Score = 35.9 bits (79), Expect = 0.49
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +2
Query: 20 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 199
++TYRG + +L ++ E+ EL+ G ++ + + KK
Sbjct: 15 EYTYRGKTVSELQELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEFKEGKK-------- 66
Query: 200 EIVKTHLRNMIIVPEMVG 253
++TH R+MII+PEM+G
Sbjct: 67 --IRTHHRDMIILPEMIG 82
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 66.1 bits (154), Expect = 4e-10
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+VG++ G + VEIKPEM+G L +F+ T KHGRPGIGA+ SS+F+PLK
Sbjct: 97 LVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVPLK 149
Score = 61.3 bits (142), Expect = 1e-08
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKE- 178
KKR FR++TYRGV +++L MP ++ +L GL + + L+K AK
Sbjct: 11 KKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIAAKAAC 70
Query: 179 APPNEKPEIVKTHLRNMIIVPEMVG 253
+ KPE+V+TH R+ II P M+G
Sbjct: 71 VSSSSKPEMVRTHARSAIIWPAMIG 95
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 65.3 bits (152), Expect = 7e-10
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
+G+++G+ F VEI PEMIGH LGE++ T + V H PG+GAT SS+ + LK
Sbjct: 122 IGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSKHVALK 173
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 64.5 bits (150), Expect = 1e-09
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
++GIY+G F +V+IKPEMIGH L +F+ + K VKH + G+GAT SS LK
Sbjct: 92 VIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSSSATSLK 144
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +2
Query: 17 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPN 190
R +TYRG LD L M + +EL+ K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 191 EKPEIVKTHLRNMIIVPEMV 250
+P +VKTHLR+M+I+PE V
Sbjct: 70 VRPPVVKTHLRHMVILPEFV 89
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 63.7 bits (148), Expect = 2e-09
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
L GIYNGK F ++++ E +G +LGE + T V+HG PG+GAT S F+P+K
Sbjct: 108 LTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPIK 161
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 20 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 199
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 200 EIVKTHLRNMIIVPEMVG 253
+++TH R+ +I PEM+G
Sbjct: 90 RVIRTHCRDFVITPEMIG 107
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 60.5 bits (140), Expect = 2e-08
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 375
IVG+YNGK F VE+K +MIG YL EF++TYKP HG+ G
Sbjct: 98 IVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
Score = 59.7 bits (138), Expect = 3e-08
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Frame = +2
Query: 5 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVKK 157
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 158 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVG 253
+RR+K++ P EKP VKTH R+MI++PE+VG
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIPELVG 96
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +2
Query: 23 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 202
F YRG L++LL+M ++ ++L+ GLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 203 IVKTHLRNMIIVPEMVG 253
+++TH R+MII+PEMVG
Sbjct: 88 VIRTHCRDMIILPEMVG 104
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 414
L + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS I K
Sbjct: 105 LTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/53 (60%), Positives = 32/53 (60%)
Frame = -1
Query: 416 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPT 258
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPT 60
Score = 34.7 bits (76), Expect = 1.1
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -3
Query: 252 PTISGTMIMFLK*VFTISGFSFGGASFLARRSFL 151
PTISG M M + V T+SGFS + LA RSFL
Sbjct: 63 PTISGMMGMLRRCVRTVSGFSIPTTAALALRSFL 96
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 41.9 bits (94), Expect = 0.007
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 351
I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 55 IHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 41.5 bits (93), Expect = 0.010
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
+ ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 108 IAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 41.1 bits (92), Expect = 0.013
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVK 360
IV +YNGK F ++I EM+GH GEF+ T K K
Sbjct: 66 IVSVYNGKNFVNLKITDEMVGHKYGEFASTRKIAK 100
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 351
IYNGK +IKPEM+GH LGEF T K
Sbjct: 46 IYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 40.3 bits (90), Expect = 0.023
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
L + +YNGKTF + I +++GH LGEFS T
Sbjct: 47 LTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 39.5 bits (88), Expect = 0.040
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 369
L + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 40 LNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 38.7 bits (86), Expect = 0.070
Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 256 IVGIYNGKTFNQVEI-KPEMIGHYLGEFS 339
IVG+YNGKT NQV I KP+ I HYL S
Sbjct: 44 IVGVYNGKTLNQVGILKPKKICHYLTSLS 72
Score = 31.9 bits (69), Expect = 8.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 158 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVG 253
L+ + + P+E P+ + HL NMIIV EM+G
Sbjct: 11 LKTKTRGSIPSENPKQTRIHLYNMIIVLEMIG 42
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 37.9 bits (84), Expect = 0.12
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 363
V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 44 VEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 37.5 bits (83), Expect = 0.16
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFS 339
++NGKT+N+V I EM+G LGEFS
Sbjct: 30 VHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 37.5 bits (83), Expect = 0.16
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
+ ++NGKTF V I +M+GH LGEF+ T
Sbjct: 174 IAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 37.1 bits (82), Expect = 0.21
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 363
++NGK F V I EMIGH GEF+ T K H
Sbjct: 91 VHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 37.1 bits (82), Expect = 0.21
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 351
I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 53 IHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 37.1 bits (82), Expect = 0.21
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 351
++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 70 VHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 37.1 bits (82), Expect = 0.21
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 369
IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 43 IYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 37.1 bits (82), Expect = 0.21
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 369
V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 174 VRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 36.7 bits (81), Expect = 0.28
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFS 339
++NGK ++ V I EM+GH LGEFS
Sbjct: 98 VHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 36.3 bits (80), Expect = 0.37
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
V IYNG F ++I MIGH GEFS+T
Sbjct: 42 VKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 35.5 bits (78), Expect = 0.65
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 366
+ + ++NGK V + M+GH LGEF+VT HG
Sbjct: 45 ITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 86
Score = 34.3 bits (75), Expect = 1.5
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -2
Query: 196 LLIRRSLFLGATQLLDQCHWFTFKTTSEPPARTGMH*FHELLIGHIKELIEINSPVSELP 17
LL R L +L DQ + +++ EP + G+ +L+ GH ++ I+I++ ELP
Sbjct: 18 LLTRWGLTFRLAKLFDQGRGLSLQSSLEPSSSIGVTELDKLINGHAEKCIQIDTLEVELP 77
Query: 16 E 14
E
Sbjct: 78 E 78
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 33.5 bits (73), Expect = 2.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 363
++NGK + V + +M+G LGE++ T KP ++
Sbjct: 52 VHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
+ +YNG+ V I M+GH LGEFS T
Sbjct: 49 IAVYNGREHIPVYITENMVGHKLGEFSPT 77
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 33.1 bits (72), Expect = 3.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPE-MIGHYLGEFSVTYKPVKH 363
+YNGK + V + + MIGH GEFS T K H
Sbjct: 52 VYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGH 85
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 351
I+NGK F + + E IGH GEF+ T K
Sbjct: 43 IFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 32.7 bits (71), Expect = 4.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 253 LIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
L + ++NG+ V + EM+GH LGEF+ T
Sbjct: 47 LTIAVHNGRQHVPVFVTDEMVGHKLGEFAPT 77
>UniRef50_Q0BVI8 Cluster: Cytochrome c-type biogenesis protein ccmI;
n=1; Granulibacter bethesdensis CGDNIH1|Rep: Cytochrome
c-type biogenesis protein ccmI - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 238
Score = 31.9 bits (69), Expect = 8.0
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 160 ASRQERGSSE*EA--RDREDSLEKHDHRSRDGRLIVGIYNGKTFNQVEIKPEMIGHYLGE 333
A RQ R ++ A R+R DSL+ H +R G L++G G+ + P+ + +
Sbjct: 125 AQRQARNINDLVAKLRERIDSLDPHSEEARQGFLLLGTVEGRMGHM----PQAVAAWRKA 180
Query: 334 FSVTYKP 354
+V Y+P
Sbjct: 181 LAVRYEP 187
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 31.9 bits (69), Expect = 8.0
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 369
VG+++G TF ++ M+G+ LGEF T + ++G+
Sbjct: 47 VGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYGK 83
>UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces
cerevisiae YBR289w SNF5; n=1; Candida glabrata|Rep:
Similar to sp|P18480 Saccharomyces cerevisiae YBR289w
SNF5 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1030
Score = 31.9 bits (69), Expect = 8.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 235 DDHVSQVSLHDLWLLIRRSLFLGATQLLDQCHW 137
++H+S++ D+ + I+ + +G TQL+DQ W
Sbjct: 493 EEHLSRIGGDDMRITIKLDIVVGQTQLIDQFEW 525
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 31.9 bits (69), Expect = 8.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 265 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 351
++NGKT+ V I +M+G LGE+ T K
Sbjct: 51 VHNGKTYQDVLITEDMVGRKLGEYVPTRK 79
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 31.9 bits (69), Expect = 8.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 259 VGIYNGKTFNQVEIKPEMIGHYLGEFSVT 345
+ +Y+G+ V I+ +M+GH LGEF+ T
Sbjct: 49 IAVYDGRKHVPVYIQEDMVGHKLGEFAPT 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,509,836
Number of Sequences: 1657284
Number of extensions: 7791197
Number of successful extensions: 19704
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 19084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19687
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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