Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20780
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    26   0.17 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   3.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.4  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 342 IYSGFIYLFHSNHKRLNNLNTLCVIYIF 259
           IY  F  +F+ +HK + ++   CV Y+F
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYVF 204


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 375 IFKFSTK*KYIIYSGFI----YLFHSNHKRLNNLNTLCVIYIF 259
           +F+ +T    +++ G++    YLF     R  + +TL VIY F
Sbjct: 277 LFEITTITAMVMWFGYVIDTMYLFIHIRSRQEDTDTLVVIYTF 319


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -3

Query: 375 IFKFSTK*KYIIYSGFI----YLFHSNHKRLNNLNTLCVIYIF 259
           +F+ +T    +++ G++    YLF     R  + +TL VIY F
Sbjct: 233 LFEITTITAMVMWFGYVIDTMYLFIHIRSRQEDTDTLVVIYTF 275


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 99  ISLNLFHLLWHIYF 140
           I LNL H  WH+ +
Sbjct: 201 IGLNLHHWHWHLVY 214


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 282 CLDCLASYGC 311
           CLD + SY C
Sbjct: 199 CLDLIGSYSC 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,890
Number of Sequences: 336
Number of extensions: 2444
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)