Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20779
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IR11 Cluster: CG32571-PA; n=2; Sophophora|Rep: CG3257...    40   0.068
UniRef50_Q9VKG4 Cluster: CG31705-PA, isoform A; n=2; Sophophora|...    37   0.48 
UniRef50_A4VYG7 Cluster: Predicted membrane protein; n=4; Bacter...    36   0.83 
UniRef50_Q6C3W5 Cluster: Similar to CA4625|IPF5742 Candida albic...    36   1.1  
UniRef50_Q2Q573 Cluster: Mating-induced protein M96-1; n=18; Phy...    34   3.4  
UniRef50_Q23M66 Cluster: Putative uncharacterized protein; n=3; ...    34   3.4  
UniRef50_Q569Z4 Cluster: Sh3tc1 protein; n=2; Tetrapoda|Rep: Sh3...    33   5.9  
UniRef50_UPI000049953C Cluster: hypothetical protein 5.t00048; n...    33   7.8  
UniRef50_Q2RK23 Cluster: Putative uncharacterized protein precur...    33   7.8  
UniRef50_Q5FC62 Cluster: Uncharacterized protein C35A5.10; n=1; ...    33   7.8  

>UniRef50_Q8IR11 Cluster: CG32571-PA; n=2; Sophophora|Rep:
           CG32571-PA - Drosophila melanogaster (Fruit fly)
          Length = 346

 Score = 39.9 bits (89), Expect = 0.068
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 575 PTYNYNQYKTSAASKYQEHYVQQQPTQVYKHFYVHXXXXXXXXXXXXXXXXXXXXQKHYK 754
           PT NYN+ ++     Y  H    QP Q+ KHFY+H                    QK+Y+
Sbjct: 125 PTINYNEQES-----YISHLANFQPAQINKHFYIHSAPEDHDEQQIVRYVNVGRPQKNYR 179

Query: 755 IIF 763
           ++F
Sbjct: 180 VVF 182


>UniRef50_Q9VKG4 Cluster: CG31705-PA, isoform A; n=2;
           Sophophora|Rep: CG31705-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 682

 Score = 37.1 bits (82), Expect = 0.48
 Identities = 26/70 (37%), Positives = 34/70 (48%)
 Frame = +3

Query: 372 ASGSGYYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYYPISTSSGSTRKSQLARYILQSE 551
           +SGS YY G  N+A  G  N      ST G G +G Y PI+ ++    +S   R  L + 
Sbjct: 183 SSGSHYYGGAHNTAYRGRNN------STGGFGSSGGYQPITATNAHNVQSSYPRQQLPAG 236

Query: 552 LTYRKA*FLP 581
            TY  A  LP
Sbjct: 237 ATYHPAGQLP 246


>UniRef50_A4VYG7 Cluster: Predicted membrane protein; n=4;
           Bacteria|Rep: Predicted membrane protein - Streptococcus
           suis (strain 05ZYH33)
          Length = 233

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -2

Query: 754 FIVFLGRREYNRRAWSWYFGFFRSSVYIEVLVDLSWLLLYVVFLIFA-GSTCFVLIIIIG 578
           F  +L RR + ++ WSW+FG   SSV + VL+ L+ +L  ++   F   S  FV  I + 
Sbjct: 81  FFTYLARRYFEKQTWSWHFG---SSVMMLVLILLTIILSPIMPASFTIASLAFVASIQVE 137

Query: 577 RNQALR 560
             + LR
Sbjct: 138 TFRRLR 143


>UniRef50_Q6C3W5 Cluster: Similar to CA4625|IPF5742 Candida albicans
           IPF5742 thioredoxin-like protein; n=1; Yarrowia
           lipolytica|Rep: Similar to CA4625|IPF5742 Candida
           albicans IPF5742 thioredoxin-like protein - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 324

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +2

Query: 476 IVLSDFYQQWLNSEVSVSPIYSTIGADLSQSLIPTYNYNQYKTSAASKYQEHYVQQQPTQ 655
           +V+ DF+ +W      +SP   T+ +D +Q L    + +Q K  AA KY    V   PT 
Sbjct: 39  LVIVDFFAEWCGPCKVISPFVETLQSDYNQVLFAKVDVDQGKDIAA-KYT---VSSMPTF 94

Query: 656 VYKH 667
           VY H
Sbjct: 95  VYFH 98


>UniRef50_Q2Q573 Cluster: Mating-induced protein M96-1; n=18;
           Phytophthora infestans|Rep: Mating-induced protein M96-1
           - Phytophthora infestans (Potato late blight fungus)
          Length = 311

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 360 YRNHASGSGYYFGDAN---SAGSGLTNNYYP-YYSTSGAGFNGLYYPISTSS 503
           Y+++      Y+G  N   ++G G   +YYP YYS+ G G    YYP   SS
Sbjct: 157 YKSYGGDCDDYYGHGNDYYNSGKGYGGDYYPDYYSSYGVGNGYGYYPDYYSS 208


>UniRef50_Q23M66 Cluster: Putative uncharacterized protein; n=3;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1876

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = +3

Query: 582  IIIINTKQVLPANIKNTTYNNNQLKSTSTSMYTLLL----KNPKYQDHALLLYSRLPKN 746
            +I +NT+Q+ P N++   Y  N+ +   T++Y ++L     NP  Q    L Y+   +N
Sbjct: 1311 LISLNTEQITPKNLQRYLYMQNEPQQNDTNIYNVVLTNYTSNPFIQTDGFLQYTNQIQN 1369


>UniRef50_Q569Z4 Cluster: Sh3tc1 protein; n=2; Tetrapoda|Rep: Sh3tc1
            protein - Xenopus laevis (African clawed frog)
          Length = 1210

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 20/77 (25%), Positives = 38/77 (49%)
 Frame = +2

Query: 446  LFYLWRWFQRIVLSDFYQQWLNSEVSVSPIYSTIGADLSQSLIPTYNYNQYKTSAASKYQ 625
            L+Y W +   + ++    Q L +  S+   YST+  + +Q +I    YN+Y+ S A K  
Sbjct: 992  LYYEWAFLVAMEINHLESQ-LQAVQSLCHFYSTVEINEAQCII----YNEYQLSLARKMS 1046

Query: 626  EHYVQQQPTQVYKHFYV 676
            +  ++ Q  +   H Y+
Sbjct: 1047 DKDLEGQVLETISHLYL 1063


>UniRef50_UPI000049953C Cluster: hypothetical protein 5.t00048; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 5.t00048 - Entamoeba histolytica HM-1:IMSS
          Length = 301

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +2

Query: 491 FYQQWLNSEVSVSPIYSTIGADLSQSLIPTYN-YNQYKTSAASKYQEHYVQQ 643
           +Y Q LNS   ++P+  T+G   +  L+P +  YNQY+T      Q++Y Q+
Sbjct: 230 YYIQGLNSFYQLTPVDLTVG---TTGLLPRHEPYNQYETFLMGYPQKNYTQE 278


>UniRef50_Q2RK23 Cluster: Putative uncharacterized protein
           precursor; n=1; Moorella thermoacetica ATCC 39073|Rep:
           Putative uncharacterized protein precursor - Moorella
           thermoacetica (strain ATCC 39073)
          Length = 269

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -2

Query: 715 AWSWYFGFFRSSVYIEVLVDLSWLLLYVVFLIFA-GSTCFVLIIIIGRNQAL 563
           A SWY     SS++  VL+ L +  L V+FL+ A G    VL++  GR++ L
Sbjct: 24  AGSWYLLINHSSLFNRVLLALGFFTLAVLFLLIALGIISLVLMLWQGRSRPL 75


>UniRef50_Q5FC62 Cluster: Uncharacterized protein C35A5.10; n=1;
           Caenorhabditis elegans|Rep: Uncharacterized protein
           C35A5.10 - Caenorhabditis elegans
          Length = 286

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +3

Query: 360 YRNHASGSGYYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYYPISTSSG 506
           Y  +  GS  Y   A+S  S   NNY PY + +   +NG Y P  TS+G
Sbjct: 99  YVAYNMGSNAYSPCASSCCSNNNNNYNPYINNN---YNGNYNPYGTSNG 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,402,421
Number of Sequences: 1657284
Number of extensions: 12303581
Number of successful extensions: 39271
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 37004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39205
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)