Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20779
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.88 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.88 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.88 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    25   0.88 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   4.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   6.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 581 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 667
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 106 SHLGYDYKVPQTSYGYPSYQLGESSSH 186
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 581 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 667
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 106 SHLGYDYKVPQTSYGYPSYQLGESSSH 186
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 581 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 667
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 106 SHLGYDYKVPQTSYGYPSYQLGESSSH 186
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 581 YNYNQYKTSAASKYQEHYVQQQPTQVYKH 667
           YN N Y       +  H++QQQ  Q   H
Sbjct: 37  YNQNSYIPPGGDFFGNHHIQQQQLQYGYH 65



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 106 SHLGYDYKVPQTSYGYPSYQLGESSSH 186
           +H  Y+  V    YGY +Y   +  SH
Sbjct: 66  NHQNYNSNVLSNGYGYGNYYHPQLHSH 92


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +3

Query: 372 ASGSGYYFGDANSAGSGLTNNYYPYYSTSGA-GFNGLYYPISTSSGSTRKS 521
           A G+        SAG   T  YYPY     A G+   Y   +    +TR+S
Sbjct: 45  AGGTAADMSAWTSAGLQPTTGYYPYDPALAAYGYGAGYDLAARRKNATRES 95


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/45 (17%), Positives = 25/45 (55%)
 Frame = -2

Query: 727 YNRRAWSWYFGFFRSSVYIEVLVDLSWLLLYVVFLIFAGSTCFVL 593
           + ++ WS +    +     ++  +L +LLL+V+ +++  + C+ +
Sbjct: 75  WKKKYWSEFLANLKLLKGRKIRKNLYYLLLFVINVLYVLTLCYAV 119


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 643 LLYVVFLIFAGSTCFVLIIIIGRNQALR 560
           + Y+V L FA    F+LI +    + +R
Sbjct: 285 IAYIVLLTFASDLLFILIQLFNSLRRMR 312


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 599 KTSAASKYQEHYVQQQPTQVYKHFY 673
           KT    KY+  Y   Q  ++ K FY
Sbjct: 152 KTRTKDKYRVVYTDHQRVELEKEFY 176


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 17  FXCLVRSADATSCSRFGFW 73
           F CLV + +   C R GF+
Sbjct: 66  FGCLVGTPETLRCQREGFF 84


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 437  LPILFYLWRWFQRIVLSDFYQQWLNSEVSVSPIY 538
            +P+L     W   ++  DF+ QW      V+P+Y
Sbjct: 1575 VPVLAQNLDWVA-VMTYDFHGQWDKQTGHVAPLY 1607


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 61  LWILGFTLAVALADV 105
           LWIL FTL V ++ V
Sbjct: 36  LWILLFTLGVTISGV 50


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 366 FGSQSNQKWIPS 331
           F SQ+N  W+P+
Sbjct: 802 FSSQNNTNWVPT 813


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,857
Number of Sequences: 336
Number of extensions: 3200
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)