Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20779
         (764 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g61900.3 68418.m07767 copine BONZAI1 (BON1) nearly identical ...    30   1.9  
At5g61900.1 68418.m07766 copine BONZAI1 (BON1) nearly identical ...    30   1.9  
At5g42870.1 68418.m05225 lipin family protein contains Pfam prof...    29   2.6  

>At5g61900.3 68418.m07767 copine BONZAI1 (BON1) nearly identical to
           BONZAI1 [Arabidopsis thaliana] GI:15487382; contains
           Pfam profile PF00168: C2 domain
          Length = 578

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 396 GDANSAGSGLTNNYYPYYSTSGAGFNGLYYPISTS 500
           G  +SA  G TN+   YY  S  GFNGL+  I  S
Sbjct: 20  GSGSSAALGATNDALDYYLKS-KGFNGLFSQIELS 53


>At5g61900.1 68418.m07766 copine BONZAI1 (BON1) nearly identical to
           BONZAI1 [Arabidopsis thaliana] GI:15487382; contains
           Pfam profile PF00168: C2 domain
          Length = 578

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 396 GDANSAGSGLTNNYYPYYSTSGAGFNGLYYPISTS 500
           G  +SA  G TN+   YY  S  GFNGL+  I  S
Sbjct: 20  GSGSSAALGATNDALDYYLKS-KGFNGLFSQIELS 53


>At5g42870.1 68418.m05225 lipin family protein contains Pfam
           profile: PF04571 lipin, N-terminal conserved region
          Length = 930

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 452 YLWRWFQRIVLSDFYQQWLNSEVSVSPIYSTIGADLSQS 568
           YLW+W  RIV+SD       S+V +      +G D SQ+
Sbjct: 722 YLWKWNSRIVVSDVDGTITRSDV-LGQFMPLVGIDWSQT 759


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,125,384
Number of Sequences: 28952
Number of extensions: 264803
Number of successful extensions: 763
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)