Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20778
(730 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 150 2e-37
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 128 6e-31
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 126 3e-30
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 111 7e-26
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 103 3e-23
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 87 2e-18
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 75 8e-15
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 52 6e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.073
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.7
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.6
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 27 3.6
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 4.8
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.8
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.3
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.3
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 150 bits (364), Expect = 2e-37
Identities = 70/101 (69%), Positives = 77/101 (76%)
Frame = +3
Query: 210 GLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 389
G F PQF GDFT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 390 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 512
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148
Score = 95.1 bits (226), Expect = 9e-21
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = +1
Query: 82 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 258
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGG
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGG 63
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 128 bits (310), Expect = 6e-31
Identities = 59/94 (62%), Positives = 69/94 (73%)
Frame = +3
Query: 207 QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 386
+G F P F GD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 387 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 488
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 91.1 bits (216), Expect = 1e-19
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = +1
Query: 52 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 231
N G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 232 IPNFMLQGG 258
IPNFM+QGG
Sbjct: 80 IPNFMIQGG 88
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 126 bits (304), Expect = 3e-30
Identities = 61/108 (56%), Positives = 73/108 (67%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F F GDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG
Sbjct: 49 LTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGP 108
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRPL 521
+TNGSQFFITTV T LDG+HVVFG V++G V+ IE +++ P+
Sbjct: 109 NTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPV 156
Score = 59.7 bits (138), Expect = 4e-10
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Frame = +1
Query: 82 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 249
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 250 QGG 258
QGG
Sbjct: 66 QGG 68
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 111 bits (268), Expect = 7e-26
Identities = 50/81 (61%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 431
GDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LD
Sbjct: 72 GDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLD 131
Query: 432 GRHVVFGNVVEGMEVVKQIET 494
G+HVVFG V+EG ++VK+IE+
Sbjct: 132 GKHVVFGEVIEGYDIVKEIES 152
Score = 74.1 bits (174), Expect = 2e-14
Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Frame = +1
Query: 73 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 234
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 235 PNFMLQGG 258
FM+QGG
Sbjct: 65 QGFMIQGG 72
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 103 bits (247), Expect = 3e-23
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 GLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 386
G+ F P F GD T G GG SIYG+KF+DE + L HTG G+LSMANAG +TN
Sbjct: 40 GVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTN 98
Query: 387 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG-RPL 521
SQFFIT T WLDG+H +FG VV G+ V K++ + S RP+
Sbjct: 99 SSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPI 144
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +1
Query: 112 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGG PT T G
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGG-DPTGTGRG 63
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 87.4 bits (207), Expect = 2e-18
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +3
Query: 273 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 449
+GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F
Sbjct: 513 DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIF 572
Query: 450 GNVVEGMEVVKQIE 491
G++VV +IE
Sbjct: 573 ARAYAGLDVVHRIE 586
Score = 43.2 bits (97), Expect = 4e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 258
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGG
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGG 508
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 75.4 bits (177), Expect = 8e-15
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 RGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWL 428
+G + G GG+SI+G F+DE LKH G++SMAN G +TNGSQFFI L
Sbjct: 327 QGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHL 386
Query: 429 DGRHVVFGNVVEGMEVVKQIETFGSQS 509
D +H +FG VV G+ V+ +E + S
Sbjct: 387 DNKHTIFGRVVGGLNVLDALEKVPTNS 413
Score = 41.9 bits (94), Expect = 9e-05
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGG P+ T G
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGG-DPSGTGRG 337
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 52.4 bits (120), Expect = 6e-08
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGG PT T +G
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGG-DPTGTGMG 74
Score = 49.2 bits (112), Expect = 6e-07
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 234 PQFHAARGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITT 410
P+F GD T G GG+SIYG F E L+ G++ MA + N SQFFIT
Sbjct: 59 PEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITL 117
Query: 411 VKTSWLDGRHVVFGNVV 461
T +G+ +FG VV
Sbjct: 118 GPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 32.3 bits (70), Expect = 0.073
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 103 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 258
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTG 54
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 91 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 186
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 386 WFPVLHHHC 412
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.6
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Frame = -3
Query: 470 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 309
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 308 LIAVDGLSPS----AVMVGEVPPCSMKLG 234
LSPS + ++ C KLG
Sbjct: 287 KFLHHSLSPSIHSTLSSISKMESCLSKLG 315
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 505 WLPKVSICLTTSMPSTTFPKTTCLPS 428
WL K S CL +P T+ P T + S
Sbjct: 304 WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 481 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 332
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 404
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -1
Query: 499 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 320
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 319 SSSNL 305
SSS++
Sbjct: 222 SSSSI 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,221,051
Number of Sequences: 5004
Number of extensions: 70536
Number of successful extensions: 248
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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