Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20778
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 25 0.97
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 24 1.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 24 1.3
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 24 1.3
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 5.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 5.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 5.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 5.2
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 5.2
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 6.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.0
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 21 9.0
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 24.6 bits (51), Expect = 0.97
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 187 GEKGFGYKGSIFHRVIPNFMLQGGTSPTITAL 282
G KG G G+ HR + +QG T P I L
Sbjct: 7 GGKGLGKGGAKRHRKVLGDNIQGITKPAIRRL 38
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 196 GFGYKGSIFHRVIPNFMLQGGTS 264
GFGY+ ++ ++V+P+ + TS
Sbjct: 389 GFGYESNVKYQVVPSALQMWSTS 411
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 196 GFGYKGSIFHRVIPNFMLQGGTS 264
GFGY+ ++ ++V+P+ + TS
Sbjct: 389 GFGYESNVKYQVVPSALQMWSTS 411
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 196 GFGYKGSIFHRVIPNFMLQGGTS 264
GFGY+ ++ ++V+P+ + TS
Sbjct: 15 GFGYESNVKYQVVPSALQMWSTS 37
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 54 ISNVSNLQNHHNDNASL 4
ISN+SN N++N N L
Sbjct: 90 ISNISNYNNNNNYNKKL 106
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 54 ISNVSNLQNHHNDNASL 4
ISN+SN N++N N L
Sbjct: 328 ISNISNYNNNNNYNKKL 344
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 186 WRERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDEN 323
W+ER R + S P+ ++ + T HN K Y N + N
Sbjct: 63 WKERSRDRTERERSREPKIISSLSNRTIHNNNNYKYNYNNNNYNNN 108
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 186 WRERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDEN 323
W+ER R + S P+ ++ + T HN K Y N + N
Sbjct: 63 WKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 186 WRERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDEN 323
W+ER R + S P+ ++ + T HN K Y N + N
Sbjct: 63 WKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 186 WRERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDEN 323
W+ER R + S P+ ++ + T HN K Y N + N
Sbjct: 63 WKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 5.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 544 TVFDNDSLRGLPDWLPKVSICLTTSMPSTTFPKTTCLPS-SQEVLTVVMKN 395
T+FD G +L S+ TT+ TT P TT + SQ+ + V + N
Sbjct: 359 TIFDVKPEFGSIYFLGNYSLVPTTTASPTTEPSTTTSTTISQKHIKVFVVN 409
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 54 ISNVSNLQNHHNDNASL 4
ISN+SN N +N N L
Sbjct: 90 ISNISNYNNDNNYNKKL 106
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.0
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 189 RERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDEN 323
+ER R + S P+ ++ + T HN K Y NK+ N
Sbjct: 64 KERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNKYNYNN 108
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 335 LKGEILVFKLIAVDGLSPSAVMVGE 261
L G + FK++ ++ L+ +V +GE
Sbjct: 55 LAGGLKSFKILPIEPLAVDSVKIGE 79
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,303
Number of Sequences: 438
Number of extensions: 4786
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -