Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20778
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 160 8e-40
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 160 8e-40
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 156 1e-38
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 154 5e-38
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 154 5e-38
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 150 8e-37
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 145 2e-35
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 144 7e-35
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 141 4e-34
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 140 1e-33
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 130 1e-30
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 130 1e-30
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 118 5e-27
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 115 3e-26
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 105 2e-23
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 104 7e-23
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 102 2e-22
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 91 7e-19
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 85 5e-17
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 84 1e-16
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 82 4e-16
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 70 2e-12
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 63 2e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 49 4e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 40 0.001
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 36 0.028
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.59
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 30 1.4
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 29 3.2
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 28 5.5
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.3
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 9.6
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.6
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.6
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.6
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.6
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 160 bits (389), Expect = 8e-40
Identities = 74/109 (67%), Positives = 84/109 (77%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRPLR 524
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SG+P +
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 7/72 (9%)
Frame = +1
Query: 64 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 222
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 223 HRVIPNFMLQGG 258
HRVIPNFM QGG
Sbjct: 61 HRVIPNFMCQGG 72
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 160 bits (389), Expect = 8e-40
Identities = 74/109 (67%), Positives = 83/109 (76%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRPLR 524
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS SG+P +
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 98.3 bits (234), Expect = 5e-21
Identities = 48/71 (67%), Positives = 54/71 (76%), Gaps = 7/71 (9%)
Frame = +1
Query: 67 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 225
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 226 RVIPNFMLQGG 258
RVIPNFM QGG
Sbjct: 63 RVIPNFMCQGG 73
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 156 bits (379), Expect = 1e-38
Identities = 74/107 (69%), Positives = 81/107 (75%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G QSG P
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTP 187
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 234
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 235 PNFMLQGG 258
P+FM+QGG
Sbjct: 93 PSFMIQGG 100
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 154 bits (374), Expect = 5e-38
Identities = 73/107 (68%), Positives = 80/107 (74%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G+QSG P
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTP 190
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 234
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 235 PNFMLQGG 258
P+FMLQGG
Sbjct: 96 PSFMLQGG 103
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 154 bits (374), Expect = 5e-38
Identities = 72/106 (67%), Positives = 82/106 (77%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P+F GDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGR 515
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE GS SGR
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
Frame = +1
Query: 73 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 231
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 232 IPNFMLQGG 258
IP FM QGG
Sbjct: 65 IPKFMCQGG 73
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 509 GKTSKRIVIKDCGQIA 556
G+TSK +VI DCGQI+
Sbjct: 158 GRTSKPVVIADCGQIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 150 bits (364), Expect = 8e-37
Identities = 70/107 (65%), Positives = 79/107 (73%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E GS G P
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNP 159
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +1
Query: 64 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 222
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 223 HRVIPNFMLQGG 258
HR+IP FM QGG
Sbjct: 61 HRIIPGFMCQGG 72
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 145 bits (352), Expect = 2e-35
Identities = 69/107 (64%), Positives = 78/107 (72%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G SG P
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVP 214
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 7/68 (10%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 234
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 235 PNFMLQGG 258
P FM+QGG
Sbjct: 120 PGFMIQGG 127
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 144 bits (348), Expect = 7e-35
Identities = 68/106 (64%), Positives = 79/106 (74%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGR 515
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE GS SG+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158
Score = 94.3 bits (224), Expect = 7e-20
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Frame = +1
Query: 64 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 222
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 223 HRVIPNFMLQGG 258
HRVIP FM QGG
Sbjct: 61 HRVIPGFMCQGG 72
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 141 bits (342), Expect = 4e-34
Identities = 65/96 (67%), Positives = 75/96 (78%)
Frame = +3
Query: 207 QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 386
+G F F GDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TN
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTN 199
Query: 387 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 494
GSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+
Sbjct: 200 GSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLES 235
Score = 85.4 bits (202), Expect = 3e-17
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 255
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 256 G 258
G
Sbjct: 156 G 156
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 140 bits (338), Expect = 1e-33
Identities = 65/92 (70%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDG 434
GDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDG
Sbjct: 154 GDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDG 213
Query: 435 RHVVFGNVVEGMEVVKQIETFGSQSG-RPLRE 527
RHVVFG V+EGMEVVK IE + G RP ++
Sbjct: 214 RHVVFGQVIEGMEVVKLIEEQETDRGDRPRKK 245
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 4/65 (6%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 243
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 244 MLQGG 258
M+QGG
Sbjct: 150 MIQGG 154
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 130 bits (313), Expect = 1e-30
Identities = 62/107 (57%), Positives = 73/107 (68%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F F A GDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+ G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 81.0 bits (191), Expect = 7e-16
Identities = 42/74 (56%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Frame = +1
Query: 61 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 216
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 217 IFHRVIPNFMLQGG 258
FHRVI FM QGG
Sbjct: 63 SFHRVIKGFMAQGG 76
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 130 bits (313), Expect = 1e-30
Identities = 62/107 (57%), Positives = 73/107 (68%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F F A GDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+ G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 81.0 bits (191), Expect = 7e-16
Identities = 42/74 (56%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Frame = +1
Query: 61 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 216
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 217 IFHRVIPNFMLQGG 258
FHRVI FM QGG
Sbjct: 63 SFHRVIKGFMAQGG 76
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 118 bits (283), Expect = 5e-27
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F F GD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G
Sbjct: 54 LHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGP 113
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
+TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 114 NTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 8/73 (10%)
Frame = +1
Query: 64 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 219
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 220 FHRVIPNFMLQGG 258
FHRVI FM+QGG
Sbjct: 61 FHRVIKGFMIQGG 73
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 115 bits (277), Expect = 3e-26
Identities = 52/85 (61%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +3
Query: 240 FHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 419
F GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 420 SWLDGRHVVFGNVV-EGMEVVKQIE 491
WLD +HVVFG V+ +G+ V+++IE
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIE 177
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Frame = +1
Query: 73 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 237
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 238 NFMLQGG 258
+FM+Q G
Sbjct: 92 DFMVQSG 98
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 105 bits (253), Expect = 2e-23
Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F F GD + +G SIYG F DENF ++H+ G+++MAN G
Sbjct: 96 LHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGP 155
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGRPLRE 527
D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE G+ SG+P ++
Sbjct: 156 DSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 234
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 235 PNFMLQGG 258
F++QGG
Sbjct: 108 SGFVIQGG 115
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 104 bits (249), Expect = 7e-23
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 431
GD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LD
Sbjct: 63 GDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLD 121
Query: 432 GRHVVFGNVVEGMEVVKQIETFGS-QSGRPLRE 527
G+H +FG V GMEV+K++ + + + RP+ E
Sbjct: 122 GKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +1
Query: 88 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSP 267
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F++QGG P
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGG-DP 65
Query: 268 TITALG 285
T T G
Sbjct: 66 TGTGRG 71
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 102 bits (245), Expect = 2e-22
Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +3
Query: 273 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 449
+GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VF
Sbjct: 534 DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVF 593
Query: 450 GNVVEGMEVVKQIETFGS-QSGRPLRE 527
G VV+GM+VV+ IE + ++ RP ++
Sbjct: 594 GRVVKGMDVVQGIEKVKTDKNDRPYQD 620
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 112 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 258
LG I ++L + PKT ENF C G+ Y +FHRVI FM+Q G
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTG 529
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/107 (42%), Positives = 61/107 (57%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F A GDF N NGT G+SIY KF DE+ L+H G+LSM+ A
Sbjct: 57 LHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADR 116
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
D GS F IT LD +VVFG +++G E++K+IE G + G+P
Sbjct: 117 DKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGKP 163
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Frame = +1
Query: 61 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 216
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 217 IFHRVIPNFMLQGG 258
FHR++ Q G
Sbjct: 63 FFHRIMKGSSAQAG 76
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
Frame = +1
Query: 64 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 222
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 223 HRVIPNFMLQGG 258
++P+ M GG
Sbjct: 61 DHIVPDLMWCGG 72
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAG 374
+ +G F P GD N + I+ + +DE F L H GPG++SMA
Sbjct: 53 IHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA--- 105
Query: 375 ADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQIE 491
D+NGSQF I +DG HVV G VVEG+++++ IE
Sbjct: 106 -DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 83.8 bits (198), Expect = 1e-16
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +3
Query: 276 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 452
G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG
Sbjct: 60 GKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFG 119
Query: 453 NVVEGMEVVKQIETFGSQSG-RPLRE 527
V+ G EV+ +E + G RPL E
Sbjct: 120 KVIHGFEVLDIMEKTQTGPGDRPLAE 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 112 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 258
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGG
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGG 54
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 81.8 bits (193), Expect = 4e-16
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 192 ERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 368
ER G+ F F GD T G GG+SI+G F+DE N L H+G GV+SMAN
Sbjct: 376 ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMAN 434
Query: 369 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG-SQSGRPLRE 527
+G TNGSQFF+ + L+ +H VFG VV G+ + +E +S RPL E
Sbjct: 435 SGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM+QGG PT T G
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGG-DPTGTGKG 405
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +3
Query: 234 PQFHAARGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFIT 407
P F GD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 59 PGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFT 117
Query: 408 TVKTSWLDGRHVVFGNVVEG--MEVVKQIETFGSQSGRPL 521
K WLD +H +FG V +++ E S+ RPL
Sbjct: 118 LDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPL 157
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGG PT + G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGG-DPTGSGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 62.9 bits (146), Expect = 2e-10
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Frame = +3
Query: 174 CPVHWRERLRL------QGLHFPSCHPQFHAARGDFTNHNGTGGKSIY----GNK---FE 314
CP+ + L+L G F + F A GD T G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYK 79
Query: 315 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 488
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Query: 489 -ETFGSQSGRPLR 524
E + RP +
Sbjct: 140 NEAYVDPKNRPYK 152
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +1
Query: 112 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
LG IVI+L SD P TC+NF LC K Y G +FH V +F Q G PT T G
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTG-DPTGTGAG 62
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 76 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 255
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 256 G 258
G
Sbjct: 153 G 153
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 252 RGDFTNHNGTGGKSIY---GNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 422
RG+ N N G I +K + + G V+ NG++F IT V +
Sbjct: 183 RGEICNVNKAGSVGIVVRDPSKPPPKTKLVARNGKLVVEEEVIAVGPNGTEFVITAVDSP 242
Query: 423 WLDGRHVVFGNVVEGMEVVKQI 488
L+ +V G V+EGM VV+++
Sbjct: 243 ELEDSVLVIGKVLEGMGVVEKM 264
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 103 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITAL 282
D G + IEL D P + F C + G+ +KG +F RV+ +F++Q G S A+
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 327 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPT 270
G I +EL + +P+ + F LC + +KG F RVI N+++Q G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 393 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPT 270
G I +EL + +P+ + F LC + +KG F RVI N+++Q G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 393 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPT 270
G I +EL + +P+ + F LC + +KG F RVI N+++Q G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 393 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = +1
Query: 100 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITA 279
D PLG++V+ L P T F+ +CT YK + H++ P G
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAGRQ----G 135
Query: 280 LGESPSTAISLKTRISPLSTLDLASSPWLMP 372
G + + R P +T + S +L+P
Sbjct: 136 GGRRDTAEVGYSLRDLPRNTDVVNSKAFLLP 166
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 378 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 494
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1
Query: 490 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 311
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +3
Query: 183 HWRERLRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 362
H++E R+ G S + A ++ T S + + E+E KH+ L +
Sbjct: 497 HYKEAQRIPGFLVLSIESPVNFANSNYL----TERTSRWIEECEEEEAQEKHSSLQFLIL 552
Query: 363 ---ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRPLRESL 533
A +G DTNG FF KT+ +VF N + EVV++++ Q E L
Sbjct: 553 EMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--EVVEKLQRADEQKEFMRPEFL 610
Query: 534 SKTV 545
TV
Sbjct: 611 FLTV 614
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 154 KTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGTSPTITALGESPS-TAISLKTR 321
KT + L GEK G G +F R + T P IT G+SP I LKTR
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKPKKSRSITGPVITK-GDSPKRKVIDLKTR 161
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 28.3 bits (60), Expect = 5.5
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = -3
Query: 419 GLDSGDEELGTISISTGISHGEDARSSVLKGEILVFKLIAVDGLSPSAVMVGEVPPCSMK 240
GLD G ++ + + G+ G ++ G +F + GLS G++PP +
Sbjct: 523 GLDIGLDDGLDVGLDDGLDFGL-VDDGLVVG---LFDVFVGTGLSWEIPPPGKLPPDASP 578
Query: 239 LGMTRWKMEPL*PKPF--SPVHRARKFSHVLGVTSL-LSSITIFPSGAS 102
LG+ + + P PF SP +LG+ S +S ++I P G S
Sbjct: 579 LGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGIS 627
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 47 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 172
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 458 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 330
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 406 VMKNWEPLVSAPALAMERTPGPVCLR 329
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 406 VMKNWEPLVSAPALAMERTPGPVCLR 329
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 451 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 284
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 406 VMKNWEPLVSAPALAMERTPGPVCLR 329
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,119,141
Number of Sequences: 28952
Number of extensions: 389122
Number of successful extensions: 1115
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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