Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20777
(711 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 164 2e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 153 5e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 146 5e-34
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 6e-30
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 129 6e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 128 1e-28
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 111 2e-23
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 107 3e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 106 5e-22
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 99 5e-20
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 97 4e-19
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 96 9e-19
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 93 6e-18
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 88 2e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 84 3e-15
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 84 4e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 84 4e-15
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 77 6e-13
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 76 8e-13
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 76 1e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 76 1e-12
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 75 1e-12
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 75 2e-12
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 75 2e-12
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 74 4e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 74 4e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 4e-12
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 71 2e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 3e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 70 5e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 70 7e-11
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 67 3e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 66 1e-09
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 64 3e-09
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 60 5e-08
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 59 9e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 5e-07
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 8e-06
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 53 8e-06
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 52 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 51 2e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 50 6e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 4e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 44 0.003
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.005
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 43 0.009
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.009
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 41 0.026
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.026
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.026
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 41 0.035
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.080
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.18
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 38 0.24
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.32
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.32
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.32
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.43
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.56
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 36 0.74
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.98
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.3
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 35 1.7
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 35 2.3
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.3
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.3
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 3.0
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 4.0
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 34 4.0
UniRef50_Q4QDA2 Cluster: Putative uncharacterized protein; n=2; ... 33 5.2
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 33 6.9
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.9
UniRef50_A2RRW8 Cluster: LOC100037118 protein; n=1; Xenopus laev... 33 9.2
UniRef50_A2SP15 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 164 bits (398), Expect = 2e-39
Identities = 82/106 (77%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK + HT
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 131 bits (317), Expect = 1e-29
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
GKPHTVPCKVTG+CGSV +RLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLG
Sbjct: 175 GKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLG 234
Query: 690 NFAKATY 710
NFAKAT+
Sbjct: 235 NFAKATF 241
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 153 bits (370), Expect = 5e-36
Identities = 82/121 (67%), Positives = 88/121 (72%), Gaps = 2/121 (1%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT-PSLARSPASVVL* 561
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNK + HT P S VL
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLV 133
Query: 562 H 564
H
Sbjct: 134 H 134
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAP 584
GKPHTVPCKVTG+C SV + LIPAP
Sbjct: 115 GKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 170 VPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
+PVTKLG L+ + KI LE IYLFSLPIK S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 146 bits (354), Expect = 5e-34
Identities = 67/106 (63%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 113 bits (271), Expect = 5e-24
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G PHTVP KV+GKCGSVT+RL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TLG
Sbjct: 148 GDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLG 207
Query: 690 NFAKATY 710
NF KA +
Sbjct: 208 NFVKAAF 214
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (320), Expect = 6e-30
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +1
Query: 226 EHLLVF-FTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 402
EH+ +F +E +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 403 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G+PHT+P KV GKCGSV +RLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLG
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
Query: 690 NFAKATY 710
N KATY
Sbjct: 225 NSVKATY 231
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +2
Query: 152 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 129 bits (312), Expect = 6e-29
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 478 PVRRGYWGNK 507
P+R+GYWGNK
Sbjct: 108 PLRQGYWGNK 117
Score = 118 bits (285), Expect = 1e-25
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
GKP+TVPCKVTG CGSV + LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LG
Sbjct: 119 GKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLG 178
Query: 690 NFAKATY 710
NFAKAT+
Sbjct: 179 NFAKATF 185
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 128 bits (310), Expect = 1e-28
Identities = 61/91 (67%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 433 TAIRGAIILAKLSVLPVRRGYWG-NKTESHT 522
AIR II+AKLSV+P+RRGYWG N + H+
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS 153
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G+PH++ K TGKCGSVT+RLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL
Sbjct: 149 GQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLE 208
Query: 690 NFAKATY 710
N KA +
Sbjct: 209 NTLKAAF 215
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 155 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++K WVPVTKLGRLV+ GKI +E I+L SLP+K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 111 bits (266), Expect = 2e-23
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3
Query: 534 KVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710
KVTG+CGSV +RLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT+
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATF 183
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 363
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 107 bits (257), Expect = 3e-22
Identities = 48/63 (76%), Positives = 52/63 (82%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
KPHTVP KVTG+CGSV +RLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 116 KPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGT 175
Query: 693 FAK 701
+
Sbjct: 176 LPR 178
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/59 (74%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Frame = +1
Query: 349 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-TESHT 522
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+ + HT
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHT 119
Score = 33.5 bits (73), Expect = 5.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 155 DQKEWVPVTKLGRLVREGKI 214
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 106 bits (255), Expect = 5e-22
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A
Sbjct: 50 REPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAA 109
Query: 433 TAIRGAIILAKLSVLPVRRGYW-GNKTESHTPS 528
+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 110 SAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 89.8 bits (213), Expect = 6e-17
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
GKPHTV CK +GKCG+ +++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTE 195
Query: 690 NFAKAT 707
NFAKA+
Sbjct: 196 NFAKAS 201
Score = 37.9 bits (84), Expect = 0.24
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
++++ EW+P T +GRLV+ KI LE I+ FS I+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIR 50
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 99 bits (238), Expect = 5e-20
Identities = 49/77 (63%), Positives = 57/77 (74%)
Frame = +3
Query: 480 SSKRLLG*QDGKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 659
S ++ LG + GK H V CKVTG CGSV + LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 660 SARGSTGTLGNFAKATY 710
SARG T +L FA+AT+
Sbjct: 61 SARGCTASLDYFAQATF 77
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 97.1 bits (231), Expect = 4e-19
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +3
Query: 534 KVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710
KVTG+CGSV +RL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNFAKAT+
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATF 182
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +1
Query: 262 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 363
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 95.9 bits (228), Expect = 9e-19
Identities = 48/66 (72%), Positives = 51/66 (77%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 388 NGHIGL 405
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 93.1 bits (221), Expect = 6e-18
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
+PH VPC+VTG+CGS+ + LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGN
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGN 209
Query: 693 FAKATY 710
F KA +
Sbjct: 210 FTKAIF 215
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +1
Query: 319 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 498
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 499 GNKTESH 519
G + E H
Sbjct: 148 GKRLEPH 154
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +2
Query: 158 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSARP 292
+ +W+P+TKLG LV+E KI LE IY FSL +N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 87.8 bits (208), Expect = 2e-16
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +3
Query: 576 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT+
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATF 45
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 84.2 bits (199), Expect = 3e-15
Identities = 43/65 (66%), Positives = 48/65 (73%)
Frame = +1
Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387
K + E L +E EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 388 NGHIG 402
NG+ G
Sbjct: 62 NGYAG 66
Score = 50.8 bits (116), Expect = 3e-05
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Frame = +2
Query: 209 KIDKLESIYLFSLPIKNSRSL---ISSSARP*MMRF*--RSCLYRNKHVPDSAHVS-RHL 370
KI LE IYLFSLPIK S + + +S + +++ R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 371 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVTRRKATHRPLQGHRQV 550
A +L R+ P +L C ++ + + G R+A HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 551 WFCNITADSCTSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGKFC*SHI 709
C +W+ + + + EA+ D W LLHLS + H G+ H+
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHL 168
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF K
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 702 ATY 710
AT+
Sbjct: 220 ATF 222
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +1
Query: 250 NQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 429
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 430 ATAI 441
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +3
Query: 498 G*QDGKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 671
G + KPHTV CKVTG GSV+L LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 77.8 bits (183), Expect = 2e-13
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA
Sbjct: 77 KETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVA 127
Query: 433 TAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522
I+ IIL KL ++PV RGY G+KT + HT
Sbjct: 128 NTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 173 PVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
P +KLG LV++ +I L IYLFSLPIK +
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = -1
Query: 528 GRCVAFR-LVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETC 352
G V F LVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 21 GHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEAR 80
Query: 351 ALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFLIGK 244
L+GT L L HDL + ++Q A+EEI+DLE G+
Sbjct: 81 TLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
KPHTV C+VT SV + I APRGT I+SAPVPKKLL+MA + D + ARG T L N
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN 135
Query: 693 FAKATY 710
KATY
Sbjct: 136 VIKATY 141
Score = 66.5 bits (155), Expect = 6e-10
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Frame = +1
Query: 271 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 451 IILAKLSVLPVRRGYWGNK-TESHTPS--LARSPASVVL*H 564
IIL + S+ G+ GNK + HT S + R SV++ H
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHH 95
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
+PH+VP V GK GSV +RLIP PRG G+V V KK+L++AGVQD ++ G T T N
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVN 196
Query: 693 FAKATY 710
FAKA +
Sbjct: 197 FAKAVF 202
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 420
+E EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 45 KEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHG 103
Query: 421 KEVATAIRGAIILAKLSVLPVRRG 492
KEV AIR AI AKL+++ ++RG
Sbjct: 104 KEVGIAIRKAINYAKLNIIEIKRG 127
Score = 32.7 bits (71), Expect = 9.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 164 EWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
EW P TKLG +V+EG+I + I+ IK
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G+PH++P KV GK GSV + L+PAP+GTG+V V K LL AG++D +++ +G T T
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTE 188
Query: 690 NFAKATY 710
NF +A Y
Sbjct: 189 NFVRAGY 195
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +1
Query: 256 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 435
E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 43 EPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRV 101
Query: 436 AIRGAIILAKLSVLPVRRG 492
AI+ AI AK++++PVRRG
Sbjct: 102 AIQKAIRDAKMNIIPVRRG 120
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 KEWVPVTKLGRLVREGKIDKLESIYLFSLPI 253
+EW P T +G LV+EGKI ++ ++ +LPI
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPI 41
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G PH++P G CGSV + L+PAPRG G+V+ V K +L +AGV+D +T G T T
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTY 191
Query: 690 NFAKATY 710
NFA+AT+
Sbjct: 192 NFAEATF 198
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +1
Query: 256 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 435
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 436 AIRGAIILAKLSVLPVRRG 492
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 433 TAIR 444
AI+
Sbjct: 152 GAIQ 155
Score = 56.8 bits (131), Expect = 5e-07
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Frame = +2
Query: 158 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKN----SRSLISSSARP*MMRF*RSCLY 325
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK L + P + +
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 326 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFE----EV 493
+ A+V ++ + + L W +A++ + L +L C QF+ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQ-TQFDSSQKRI 174
Query: 494 TGVTRRKATHRPLQGHRQVWFCNITADSCTSWYWNCVCASS*EASSDGWCTGLLH 658
G R TH P+Q R+ S T YW E ++GW LLH
Sbjct: 175 LGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G+PHTV + GK GSV + L PAPRG G+ +K+L++AG++D +T + G+T T
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTV 182
Query: 690 NFAKATY 710
NFAKAT+
Sbjct: 183 NFAKATF 189
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 36 KESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVG 94
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI+ AI +AKL+++ V RG
Sbjct: 95 GAIQKAIDIAKLNIIDVSRG 114
Score = 33.1 bits (72), Expect = 6.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 167 WVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 262
W P T+LG+ V EG+ID ++ LP+K S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3
Query: 519 HTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFA 698
H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+ + +
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTMNSTS 224
Query: 699 KA 704
KA
Sbjct: 225 KA 226
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
QE II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 75 QEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMR 133
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI A A L+V P++ G
Sbjct: 134 IAIEKATNAAYLNVNPIKMG 153
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = +3
Query: 525 VPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 704
V KVT GSV + LIPAPRGTGIVSAPV K L AG+ +CY SAR T TL NF+K
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNFSKP 118
Query: 705 T 707
T
Sbjct: 119 T 119
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 325 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = -1
Query: 501 TPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 322
TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 321 RHDL*NLIIQGRAEEEINDLEFL 253
R D+ N I+Q ++ +NDLEFL
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 433 TAIRGAIILAKLSVLPVRRG 492
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 510 GKPHT-VPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 686
G P T VP K+TG+ GS + L+PAP G G+V + +++L +AGV D ++ + G T T
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTT 166
Query: 687 GNFAKATY 710
N+A+AT+
Sbjct: 167 INYAQATF 174
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/62 (50%), Positives = 47/62 (75%)
Frame = +3
Query: 519 HTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFA 698
H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T + +
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPTTNSTS 205
Query: 699 KA 704
KA
Sbjct: 206 KA 207
Score = 59.7 bits (138), Expect = 7e-08
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
QE II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 56 QESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMR 114
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI A A L+V P++ G
Sbjct: 115 IAIEKANNQALLNVGPIKLG 134
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +1
Query: 238 VFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 417
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 418 SKEVATAIRGAIILAKLSVLPVRRGYW 498
S + I+ A+ AKL++ +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/69 (42%), Positives = 49/69 (71%)
Frame = +3
Query: 504 QDGKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 683
++GKP+T+ K +GK GSV + + PAP+GTGIV++ +L+++G++DC+T + G T +
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKS 238
Query: 684 LGNFAKATY 710
N KAT+
Sbjct: 239 SFNTIKATF 247
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
GKPHT+P V GK GSV++ L PAP+G G+ V K +L+MAG+ D + A G T T
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTV 180
Query: 690 NFAKATY 710
N+A AT+
Sbjct: 181 NYALATF 187
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI+ AI AKL+++ ++RG
Sbjct: 93 PAIKKAIDNAKLNIIEIKRG 112
Score = 32.7 bits (71), Expect = 9.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 161 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
+EW P T+LGRLV G+I + LP+K
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLK 34
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 433 TAIRGAIILAKLSV 474
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 67.3 bits (157), Expect = 3e-10
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 433 TAIRGAIILAKL-SVLPVRRGYWGNKTESHTPSLARSPASV 552
TA+ + + L S LP R Y GN T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 53.6 bits (123), Expect = 5e-06
Identities = 34/66 (51%), Positives = 40/66 (60%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
KP T PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLGN
Sbjct: 105 KP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGN 159
Query: 693 FAKATY 710
AKAT+
Sbjct: 160 IAKATF 165
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/69 (42%), Positives = 47/69 (68%)
Frame = +3
Query: 504 QDGKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 683
Q G +++ K GK GSVT+ + PAP+G G+ +A + +L++AGV+D +T++ G+T T
Sbjct: 172 QPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRT 231
Query: 684 LGNFAKATY 710
N AKAT+
Sbjct: 232 TVNLAKATF 240
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+E EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 87 KEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVG 145
Query: 433 TAIRGAIILAKLSVLPVRRG 492
AI+ AI +AKL+++ V RG
Sbjct: 146 GAIQKAIDVAKLNIIEVDRG 165
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = -3
Query: 706 VALAKFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRNVTEPHLPVTLQG 527
+ LAK PKV V+P A V QS P+ FLGT A+ +PVP GAG+ TEP P+TL G
Sbjct: 8 IVLAKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG 67
Query: 526 TVCG 515
+CG
Sbjct: 68 -LCG 70
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +3
Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689
G PH++P +V GK GSV + L PAP+G GIV+ KK+ ++AG++D + + G T T
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKM 195
Query: 690 NFAKATY 710
N A +
Sbjct: 196 NHVFAVF 202
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 325 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 492
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.43
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 161 KEWVPVTKLGRLVREGKIDKLESI 232
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 59.3 bits (137), Expect = 9e-08
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 432
+EFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 433 TAIRGAIIL 459
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 283 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 463 KLSVL--PVRRGY 495
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 36.7 bits (81), Expect = 0.56
Identities = 19/64 (29%), Positives = 37/64 (57%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K +++P ++ + G+ ++ + PA GTG+V+ + +L++AG Q+ G+ L N
Sbjct: 138 KDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNALNN 197
Query: 693 FAKA 704
AKA
Sbjct: 198 -AKA 200
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 472 VLPV 483
++ V
Sbjct: 72 LISV 75
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+P ++ G+ GS + + PA GTG++S + +L++AGV D T + GS + N +
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPI-NMIR 139
Query: 702 AT 707
AT
Sbjct: 140 AT 141
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K +T+P ++ GK G+ TL + PA GTG+++ +++L++ GV D T +GS N
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGSRNK-HN 133
Query: 693 FAKAT 707
A+AT
Sbjct: 134 VARAT 138
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 478 PV 483
+
Sbjct: 71 KI 72
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 52.4 bits (120), Expect = 1e-05
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +1
Query: 262 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 441
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 442 RGAIILAKLSVLPVRRGYWGNK 507
+ AI L + + GY GNK
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNK 125
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 474 FTSSKRLLG*QDGKPHTVPCKVTG-KCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGV 644
F++ G + G PHT+PC VT + V + L APRGTG VSA VPKKL +A +
Sbjct: 115 FSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 469 SVLPVRR 489
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 537 VTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 707
V G+ G+ + L+PAP GTGI++ + ++++AG D YT +RG+ + N +AT
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRAT 179
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 271 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 451 IILAKLSVLPV 483
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 37.5 bits (83), Expect = 0.32
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
T+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +3
Query: 588 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 253 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 405
+E++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 38.3 bits (85), Expect = 0.18
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 173 PVTKLGRLVREGKIDKLESIYLFSLPIK 256
PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 286 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 465
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 466 LSVLPV 483
++ +
Sbjct: 73 KQLVRI 78
Score = 35.9 bits (79), Expect = 0.98
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 674
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +3
Query: 480 SSKRLLG*QDGKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 659
S+K+ L + K HT+P +V GK S + L P+ GTGI++ + +++ AG+QD T
Sbjct: 85 SAKKHLVKINFKGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLT 144
Query: 660 SARGSTGTLGNFAKAT 707
+ GS+ + N KAT
Sbjct: 145 KSWGSSNPV-NIVKAT 159
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 295 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 474
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 475 LPV 483
+ +
Sbjct: 91 VKI 93
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 472 VLPVR 486
+ V+
Sbjct: 138 MYKVK 142
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K T+ +V GK G+ + + PAP+GTG+++ K +L++ G +D Y+ G +L N
Sbjct: 145 KNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL-N 203
Query: 693 FAKAT 707
+AT
Sbjct: 204 MVRAT 208
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 478 PV 483
V
Sbjct: 77 EV 78
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+P +V G+ + + L PA GTGI++ + ++++AG+Q+ T + GST L N A
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL-NLAL 142
Query: 702 AT 707
AT
Sbjct: 143 AT 144
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 277 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 456
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 457 LAKLSVLPV 483
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 40.3 bits (90), Expect = 0.046
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
TVP +V G G+ + + PA GTG+++ + ++++AG+ D Y + G + N +
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLGRNNPI-NMIR 170
Query: 702 AT 707
AT
Sbjct: 171 AT 172
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 478 --PVRRG 492
PV G
Sbjct: 79 TVPVENG 85
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+P ++ G+ + + L PA GTG+++ VP+ + ++AG+ + + GS + N A
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGSRNKV-NVAY 144
Query: 702 ATY 710
A +
Sbjct: 145 AVF 147
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 478 PV 483
V
Sbjct: 209 QV 210
Score = 41.1 bits (92), Expect = 0.026
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K T P + G G+ + L PA GTG+++ + +L+MAGV++ GS L N
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273
Query: 693 FAKAT 707
A+AT
Sbjct: 274 -ARAT 277
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 34.7 bits (76), Expect = 2.3
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K ++P V G G+ + + P+ G+G+++ + +L++AG+++ GS L N
Sbjct: 93 KSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLGSDNLLNN 152
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 478 PV 483
V
Sbjct: 246 TV 247
Score = 37.5 bits (83), Expect = 0.32
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T P + G G+ + L PA GTG+++ + +L+MAGV++ S L N A+
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN-AR 312
Query: 702 AT 707
AT
Sbjct: 313 AT 314
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 283 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 463 KLSVL--PVRRG 492
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 283 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 462
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 463 KLSVLPVRR 489
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 35.9 bits (79), Expect = 0.98
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+ V G + T+ L PA GTG+++ + +++ AG+ D T + GS T N +
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS-ATAVNVVR 172
Query: 702 AT 707
AT
Sbjct: 173 AT 174
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+P +V K G + L PA GTG+++ + +L++AGV+D + G++ N AK
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGASNA-ANVAK 142
Query: 702 ATY 710
AT+
Sbjct: 143 ATF 145
Score = 35.9 bits (79), Expect = 0.98
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 295 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 444
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 471
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 472 VLPVRRG 492
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST N +
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGSTNP-DNVVR 155
Query: 702 ATY 710
A +
Sbjct: 156 AVF 158
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 472 VLPV 483
V+ V
Sbjct: 88 VIRV 91
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 478 PV 483
V
Sbjct: 128 RV 129
Score = 40.7 bits (91), Expect = 0.035
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K +++P ++G G+ + L PA GTG+++ + +L++AG+++ + GS L N
Sbjct: 133 KINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGSKSPLNN 192
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 167 WVPVTKLGRLVREGKIDKLESIYLFSLPIK 256
W PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 478 PV 483
V
Sbjct: 104 RV 105
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+ V G+ + + L PA GTG+++ + +L+ AGV D + GS + N
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI-NVVH 169
Query: 702 AT 707
AT
Sbjct: 170 AT 171
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 41.1 bits (92), Expect = 0.026
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 585 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710
RG + + + KKLL +A +QDCY AR + LGN+AKAT+
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATF 46
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.026
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 298 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 477
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 478 PV 483
V
Sbjct: 79 EV 80
Score = 33.9 bits (74), Expect = 4.0
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 692
K +++ G G + + PA GTG+++ + +L++AGV++ GS L N
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.026
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 465
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 36.3 bits (80), Expect = 0.74
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
++P +V G G+ + L PA GTG+++ + +L+ AGV + T GS N K
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGSHNP-HNMVK 143
Query: 702 AT 707
AT
Sbjct: 144 AT 145
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 40.7 bits (91), Expect = 0.035
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 534 KVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 671
+V G+ G+ + L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.080
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
++P +V G+ G+ + LIPA GTGI++ + + + G+ D T + G+ + K
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGTNNPV-TLVK 148
Query: 702 AT 707
AT
Sbjct: 149 AT 150
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
TVP + K + + L PAP+G GI+++ + ++++AG D YT + GS + N K
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGSR-SKENVVK 217
Query: 702 ATY 710
A +
Sbjct: 218 AVF 220
Score = 37.9 bits (84), Expect = 0.24
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 157 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQEFEIIDFFLGPS--LNDEVLKIMPVQK 330
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 331 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 483
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 37.9 bits (84), Expect = 0.24
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 546 KCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 677
K G+ L + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.32
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 489
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.32
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 444
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 513 KPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 674
K T+P +V G + L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.32
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 472 VLPVRR 489
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 453 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 355
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 444
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
Score = 34.3 bits (75), Expect = 3.0
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 486 KRLLG*QDGKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 665
K L+ + + ++P +V L L PA GTGIV+ + +L+MAGV++ +
Sbjct: 71 KNLITIESLEGDSIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKS 130
Query: 666 RGSTGTLGNFAKATY 710
GS + N KA +
Sbjct: 131 LGSNNPM-NQVKAAF 144
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.56
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 292 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 471
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 472 VLPV 483
++ V
Sbjct: 81 MVRV 84
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+ V G+ G+ + + PA GTGI++ + + ++ GV + GST N +
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPY-NIVR 148
Query: 702 AT 707
AT
Sbjct: 149 AT 150
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 36.3 bits (80), Expect = 0.74
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -1
Query: 255 LIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 154
L GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 20 LTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.98
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 304 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 483
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 322 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 489
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 469 SVLPVRR 489
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+P + G ++ L PA GTG+ + + +L GV D ++GS+ N K
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSSNP-HNLVK 143
Query: 702 AT 707
AT
Sbjct: 144 AT 145
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 179 TKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSA 286
TK+GRL I+ ++ +YLF PI N+R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 280 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 459
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 460 AKLSVL 477
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 441
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 3.0
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 289 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 468
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 469 SVLPVRR 489
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 33.9 bits (74), Expect = 4.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 519 HTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 674
HT+ +V GK ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICVMLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 522 TVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 701
T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G T N +
Sbjct: 81 TIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMG-TSNPHNMIR 139
Query: 702 AT 707
AT
Sbjct: 140 AT 141
>UniRef50_Q4QDA2 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 5756
Score = 33.5 bits (73), Expect = 5.2
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Frame = -1
Query: 594 QYHEVQESAVMLQNHTCR*PCKGRCVAFRLVTPVTSSNW*NRQLSKDNSASNGSGDFLAA 415
Q +V+ S +L++ +C + CVA PV +S L + + + G F+
Sbjct: 2679 QQADVRRSGALLRSESCDGDVRPACVADASTDPVLASERNENALQRSPAMAQDRGSFVRL 2738
Query: 414 LHTQTNMTVVVANG--NKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFLIG 247
L T+ + N L AL C++L + ++ + + D E LIG
Sbjct: 2739 LLTRAAGPTIAPNDALRVLLRGFALPELCVYLSEVAAESAVLGVQQGTAMADAELLIG 2796
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.1 bits (72), Expect = 6.9
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 259 FEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATA 438
F I DF G SL D+++ + + + QRT+ GH GL CS EVATA
Sbjct: 66 FTITDF-PGESLKDDLMMASGLGSRLLSSQRTK-----------GHSGLSSMCSGEVATA 113
Query: 439 IRGAIILAKL-SVLPVRRGYWGNKTESHTPSL 531
I+ I + L S P+ R GN T PS+
Sbjct: 114 IQVLGITSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 304 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 450
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_A2RRW8 Cluster: LOC100037118 protein; n=1; Xenopus
laevis|Rep: LOC100037118 protein - Xenopus laevis
(African clawed frog)
Length = 358
Score = 32.7 bits (71), Expect = 9.2
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 654 SSPVH-QPSEEAS*ELAQTQFQYHEVQESAVMLQNHTCR*PCK 529
SSP+ +P EEA+ E +++ + EV E V+L ++T PC+
Sbjct: 285 SSPIESEPLEEATIEKKESEVEAPEVTEELVLLASYTVHCPCR 327
>UniRef50_A2SP15 Cluster: Putative uncharacterized protein; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
uncharacterized protein - Methylibium petroleiphilum
(strain PM1)
Length = 149
Score = 32.7 bits (71), Expect = 9.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 622 FLGTGADTIPVPRGAGISRNVTEPHLPVTL 533
++G G + +PV R G++ NVTEP +TL
Sbjct: 12 YIGQGYNVVPVGRHKGVALNVTEPKQMITL 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,142,407
Number of Sequences: 1657284
Number of extensions: 15375520
Number of successful extensions: 42662
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 40735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42630
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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