BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20777 (711 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 171 8e-43 U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 171 8e-43 U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 171 8e-43 AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 171 8e-43 AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 171 8e-43 AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 31 1.2 BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 30 2.7 AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 30 2.7 AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p pro... 29 8.2 AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-P... 29 8.2 AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-P... 29 8.2 AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-P... 29 8.2 >X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein S2 protein. Length = 267 Score = 171 bits (416), Expect = 8e-43 Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%) Frame = +1 Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387 K + E L +EFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 138 bits (335), Expect = 5e-33 Identities = 61/67 (91%), Positives = 66/67 (98%) Frame = +3 Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689 GKPHTVPCKVTGKCGSV++RLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGSTGTLG Sbjct: 158 GKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLG 217 Query: 690 NFAKATY 710 NFAKATY Sbjct: 218 NFAKATY 224 Score = 68.5 bits (160), Expect = 8e-12 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein S2 protein. Length = 267 Score = 171 bits (416), Expect = 8e-43 Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%) Frame = +1 Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387 K + E L +EFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 140 bits (338), Expect = 2e-33 Identities = 62/67 (92%), Positives = 66/67 (98%) Frame = +3 Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689 GKPHTVPCKVTGKCGSV++RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLG Sbjct: 158 GKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLG 217 Query: 690 NFAKATY 710 NFAKATY Sbjct: 218 NFAKATY 224 Score = 68.5 bits (160), Expect = 8e-12 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein S2 protein. Length = 267 Score = 171 bits (416), Expect = 8e-43 Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%) Frame = +1 Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387 K + E L +EFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 140 bits (338), Expect = 2e-33 Identities = 62/67 (92%), Positives = 66/67 (98%) Frame = +3 Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689 GKPHTVPCKVTGKCGSV++RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLG Sbjct: 158 GKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLG 217 Query: 690 NFAKATY 710 NFAKATY Sbjct: 218 NFAKATY 224 Score = 68.5 bits (160), Expect = 8e-12 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p protein. Length = 267 Score = 171 bits (416), Expect = 8e-43 Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%) Frame = +1 Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387 K + E L +EFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 140 bits (338), Expect = 2e-33 Identities = 62/67 (92%), Positives = 66/67 (98%) Frame = +3 Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689 GKPHTVPCKVTGKCGSV++RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLG Sbjct: 158 GKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLG 217 Query: 690 NFAKATY 710 NFAKATY Sbjct: 218 NFAKATY 224 Score = 68.5 bits (160), Expect = 8e-12 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA protein. Length = 267 Score = 171 bits (416), Expect = 8e-43 Identities = 86/106 (81%), Positives = 90/106 (84%), Gaps = 1/106 (0%) Frame = +1 Query: 208 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 387 K + E L +EFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 388 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKT-ESHT 522 NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK + HT Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162 Score = 140 bits (338), Expect = 2e-33 Identities = 62/67 (92%), Positives = 66/67 (98%) Frame = +3 Query: 510 GKPHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 689 GKPHTVPCKVTGKCGSV++RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTLG Sbjct: 158 GKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLG 217 Query: 690 NFAKATY 710 NFAKATY Sbjct: 218 NFAKATY 224 Score = 68.5 bits (160), Expect = 8e-12 Identities = 31/36 (86%), Positives = 32/36 (88%) Frame = +2 Query: 149 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 256 KED KEWVPVTKLGRLVREGKI LE IYL+SLPIK Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA protein. Length = 954 Score = 31.5 bits (68), Expect = 1.2 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +3 Query: 516 PHTVPCKVTGKCGSVTLRLIPAPRGTGIVSAPVPKKLLQMA 638 PH+V K G G + L L+P G G+++ + K+L + A Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946 >BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p protein. Length = 823 Score = 30.3 bits (65), Expect = 2.7 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -2 Query: 155 LPCRAHDHGRDXDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 12 L C H D R+H ++GL + V+ + REN VH + ++ LLN Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407 >AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA protein. Length = 1958 Score = 30.3 bits (65), Expect = 2.7 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -2 Query: 155 LPCRAHDHGRDXDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 12 L C H D R+H ++GL + V+ + REN VH + ++ LLN Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373 >AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p protein. Length = 407 Score = 28.7 bits (61), Expect = 8.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 552 GSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710 G + P G G+V + + ++ G++D Y GST + N AKA + Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFF 303 >AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-PC, isoform C protein. Length = 407 Score = 28.7 bits (61), Expect = 8.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 552 GSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710 G + P G G+V + + ++ G++D Y GST + N AKA + Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFF 303 >AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-PA, isoform A protein. Length = 407 Score = 28.7 bits (61), Expect = 8.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 552 GSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710 G + P G G+V + + ++ G++D Y GST + N AKA + Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFF 303 >AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-PB, isoform B protein. Length = 916 Score = 28.7 bits (61), Expect = 8.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 552 GSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710 G + P G G+V + + ++ G++D Y GST + N AKA + Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFF 303 Score = 28.7 bits (61), Expect = 8.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 552 GSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710 G + P G G+V + + ++ G++D Y GST + N AKA + Sbjct: 529 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFF 580 Score = 28.7 bits (61), Expect = 8.2 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 552 GSVTLRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 710 G + P G G+V + + ++ G++D Y GST + N AKA + Sbjct: 806 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFF 857 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 33,236,751 Number of Sequences: 53049 Number of extensions: 758337 Number of successful extensions: 2173 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2045 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2173 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3149551053 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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