Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20776
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 64 9e-11
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.036
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 34 0.11
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 31 0.77
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 31 0.77
SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0) 31 0.77
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 31 1.0
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 30 1.8
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 1.8
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 2.4
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 3.1
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 29 3.1
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 29 5.5
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 29 5.5
SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 5.5
SB_29805| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 29 5.5
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 5.5
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 29 5.5
SB_15006| Best HMM Match : Stig1 (HMM E-Value=2) 29 5.5
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 7.2
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 28 7.2
SB_45193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 28 7.2
SB_29138| Best HMM Match : Albicidin_res (HMM E-Value=0.26) 28 7.2
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_15442| Best HMM Match : rve (HMM E-Value=0.00084) 28 7.2
SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28) 28 7.2
SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3) 28 9.5
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 64.5 bits (150), Expect = 9e-11
Identities = 43/110 (39%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +2
Query: 209 PEVFIRRYREV*FEPVK--HTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTT 382
P+ F R FE K H ET+EKN LP KD +A EK GVE F K ++KH
Sbjct: 445 PDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVE 503
Query: 383 TEEKNPLXXXXXXXXXXXXNKF--LNGIENFDPTKLKHTETCEKTRSPQR 526
T EKNPL + + FD +KLKH ET EK P +
Sbjct: 504 TLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTK 553
Score = 61.3 bits (142), Expect = 8e-10
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = +2
Query: 209 PEVFIRRYREV*FEP--VKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTT 382
PEV R F+ +KH ET+EK +P KDV+ AE V+ FD +++KH
Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVV 579
Query: 383 TEEKNPL-XXXXXXXXXXXXNK-FLNGIENFDPTKLKHTETCEKTRSPQRTSLSK 541
T+EKNPL NK + + +FD TKLKH T EK+ P + + +
Sbjct: 580 TQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKE 634
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 254 VKHTETQEKNPLPDKDVVAAEKAHQNLLDGVE--HFDKTQMKHTTTEEKNPLXXXXXXXX 427
+KH TQEKNPLP + E +N D E FD T++KH TT+EK+ +
Sbjct: 575 LKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKE 634
Query: 428 XXXXNKFLNGIENFDPTKLKHTETCEKTRSPQRTSLSKRNQLEPL 562
++ +++FD +KLKH ET EK P L + + E L
Sbjct: 635 EAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVL 677
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 254 VKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPLXXXXXXXX 427
+KH ET EKNPLP V+ E + L D V FD +++KH +EKNPL
Sbjct: 651 LKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITT 710
Query: 428 XXXXNKFLNGIENFDPTKLKHTETCEKTRSPQRTSLSK 541
+ ++ FD +KLKH +T EK P ++++
Sbjct: 711 ESTETR--AEVKTFDHSKLKHVQTEEKNPLPDAKTIAQ 746
Score = 58.0 bits (134), Expect = 8e-09
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +2
Query: 254 VKHTETQEKNPLPDKDVVAAEKAHQNLLDGVE--HFDKTQMKHTTTEEKNPLXXXXXXXX 427
+KH +T+EKN LP + + E D E F+K++++H T+EKN L
Sbjct: 422 LKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIAD 481
Query: 428 XXXXNKFLNGIENFDPTKLKHTETCEKTRSPQRTSL 535
F +G+E F KLKH ET EK P ++
Sbjct: 482 EKRTAPF-SGVEVFQKNKLKHVETLEKNPLPDAQNI 516
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +2
Query: 290 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLN--GIE 463
P +V + + + V FD +KH T+EKN L ++F + ++
Sbjct: 396 PGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVK 455
Query: 464 NFDPTKLKHTETCEKTRSPQRTSLSKRNQLEP 559
+F+ +KL+H ET EK P + +++ + P
Sbjct: 456 SFEKSKLQHVETKEKNTLPTKDTIADEKRTAP 487
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 254 VKHTETQEKNPLPDKDVVAAEKA 322
+KH +T+EKNPLPD +A EKA
Sbjct: 727 LKHVQTEEKNPLPDAKTIAQEKA 749
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +3
Query: 84 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 203
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 84 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 203
+PK D +S++ F+ + L+ V T EK ++PS ED+ E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 72 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 227
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/93 (30%), Positives = 37/93 (39%)
Frame = +1
Query: 187 KTSPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDS 366
++S RRPRS + R R S RDS E S + + SPP S S
Sbjct: 32 RSSVDRRPRSSRESPERK--RPSSLGRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPS 89
Query: 367 DEAHDDGRKESTAPDRSYRSGEGKEQIPERHRE 465
+ DD R R R +E+ P R R+
Sbjct: 90 RRSSDD-RSTDARDRRDRRRSSSRERRPPRDRD 121
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 142 SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVS-RSLIRAS----EAHRDSGEEPASGQRRC 306
SVT T +RL R S L PRS+ T S R+L R S A R GEE G+ +C
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGEYKC 497
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 31.9 bits (69), Expect = 0.59
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Frame = +1
Query: 220 YSTVSRSLIRASEAHRDSGEEPASGQRRCRSGESPPE----PLGRS*TLRQDSDEAHDDG 387
YST R + A+ P+ Q RSG S P T+ E +G
Sbjct: 415 YSTRRRKTLVRPRANSLFDRAPSDSQLSIRSGSSGSSTHSIPSIIGDTISLADQEPSGEG 474
Query: 388 RKE------STAPDRSYRSGEGKEQIPERHR 462
R + STA D SY SG G E P HR
Sbjct: 475 RVQRSASIDSTASDSSYDSGSGPELSPNEHR 505
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 2 ESSIPFLIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 136
E S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/95 (20%), Positives = 44/95 (46%)
Frame = +1
Query: 265 RDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 444
++ G+ + +++ R E P + L + ++ D+ + +E PD+ + +++
Sbjct: 829 QEQGKPDKNKEKQDREQEKPDKDLEKQYQKQEKPDKGQEKQDREQEKPDKDQEKQDREQE 888
Query: 445 IPERHRELRSH*AEAHGNVREDSLPTKDVIEQEKS 549
P++ +E + H E + D K EQEK+
Sbjct: 889 KPDKDQEKQDHEQE-----KPDKDQEKQDREQEKT 918
>SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0)
Length = 470
Score = 31.5 bits (68), Expect = 0.77
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +1
Query: 196 PLRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQ-RRCRSGESPPEPLGRS*TLRQDSDE 372
P + P S V+R+ +A A + + A+ Q G+ + + D
Sbjct: 312 PTKTPDSSTGEVNRNQPKADAAKINQQWKDATEQPMNSTQGKVAKDDEDHAKVTAGKRDR 371
Query: 373 AHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AEAHGNVREDSLPTKDVIEQE 543
+ D E T P R +G+ + RHR+ + A+ E+ P+ DVI Q+
Sbjct: 372 SQSDSEPEDTTPLRQKGAGKDNSR-KRRHRKKTGNEAQHSAGSDEEDEPSYDVISQD 427
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 31.1 bits (67), Expect = 1.0
Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Frame = +1
Query: 73 P*KTSPRS-PQ-T*RVSSKASTPAVSVTSTPMK-RLCFRLLKTSPLRRPRSLYSTVSRSL 243
P TSPR+ P+ + R S +AS S S+P R R K+SP PRS T SR L
Sbjct: 321 PEVTSPRATPRASPRASPRASPRDQSSHSSPRNSRNSSR--KSSPKPSPRSSRPTSSRKL 378
Query: 244 IRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEA----HDDGRKESTAPD 411
R S P SGQ +SP G S T DSD + +G+ + +APD
Sbjct: 379 SRKSSR---KSSRPTSGQ------QSPVNVSG-SDTDSSDSDSSVSSKASEGKPDKSAPD 428
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 266 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
+T E++P DK A +LLDG+ FD+ + +H
Sbjct: 261 KTIEQDPTSDKSYKALRDTTHDLLDGLRDFDQAKEEH 297
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 266 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
+T E++P +K A +LLDG++HF + + +H
Sbjct: 163 KTIEQDPSSEKSYQALRDTTHDLLDGLQHFGQAKEEH 199
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -3
Query: 209 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 66
GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 54 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 200
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 209 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 114
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 266 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
+T E++P +K A +LLDG+ +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 266 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 567 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 266 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 492 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 616 LM*VRSICVVHYKFYFCFCTMATLPG 693
L+ V IC VH FY+C C +++ G
Sbjct: 55 LVAVLRICSVHLDFYYCTCVWSSMAG 80
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/76 (32%), Positives = 33/76 (43%)
Frame = +1
Query: 205 RPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDD 384
R R S+ S+SL R+ + R S +RR RS E RS +
Sbjct: 302 RSRDRSSSKSKSLRRSKKYSRSRSR---SSERRRRSRSRSTEHRYRS----RSRSPRRKH 354
Query: 385 GRKESTAPDRSYRSGE 432
R ST+P R YRSG+
Sbjct: 355 RRSTSTSPSRRYRSGK 370
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Frame = +2
Query: 275 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXX 421
E++P +K A +LLDG+ +FD+ + +H E++P
Sbjct: 173 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQ 232
Query: 422 XXXXXXNKFLNGIENFDPTKLKHTETCEK 508
+ L+G+ FD K +H + K
Sbjct: 233 ALRDTTHDLLDGLRYFDQAKEEHAKLIPK 261
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 275 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 75 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 108
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 275 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 376
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 320 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 353
>SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 248 EPVKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKN 397
EP+ ++T + + D+ VVAA H ++ G+ H + +KH E++
Sbjct: 1257 EPIPASKTSPR-AITDEQVVAAHHTHLAMVTGLCHEEMVLLKHIDKGEQD 1305
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 204 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 88
S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_29805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +2
Query: 248 EPVKHTETQEKNPLPDK----DVVAAEKAHQNLLDGVEHF--DKTQMKHTTTEEKNP 400
EP K ET KN LP+K D ++ K +Q+ D E +KT + + +E P
Sbjct: 278 EPTKTAETDNKNSLPNKINSDDTRSSFKPYQHSTDKTEETPPEKTGFRSPSLKENPP 334
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -1
Query: 448 EFVLFLLRFDSFDRGQWILFFRRRVLHLSLVEVFNSVQEVL 326
+FVL++LRF +D I ++ + HL+LVE + +Q+ L
Sbjct: 295 DFVLYMLRFSDYD----IYTGKKSIAHLTLVEFESWLQDEL 331
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 28.7 bits (61), Expect = 5.5
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Frame = +1
Query: 82 TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASEA 261
T P P + ST S+T+ K R +S + + S T S S S+
Sbjct: 92 TLPVLPPLITKYAAVSTAGHSLTTGDSKVFTSRSHASSTVAQSSSTVMTASSSSGIGSKH 151
Query: 262 HRDSGEEPASGQRRCRSGESPPEPLGRS*-TLRQDSDEAHDDGRKESTAPDRSYRSGEGK 438
+ E S ++ S +S T SD + GR++S+ ++S K
Sbjct: 152 KQHRPHEEGSSKKHKSHHSSRQHGHSKSGRTSSYSSDSSPGSGREKSSHSRSVHKSHSSK 211
Query: 439 EQIPERHRELRSH 477
P H RSH
Sbjct: 212 HSHPSSHSTNRSH 224
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 573 VTRKCISLVSPYFNIDVSQIDL 638
+ KC L+SPY ++D+ DL
Sbjct: 13 IAAKCTQLISPYLDLDIKYFDL 34
>SB_15006| Best HMM Match : Stig1 (HMM E-Value=2)
Length = 991
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -2
Query: 723 KSGVC--CTPPLPRQCCHCTK 667
K GVC C+ P R+C HC+K
Sbjct: 704 KDGVCFLCSKPPSRECLHCSK 724
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 75 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 203
L DL +V +LKS+ EG CL D++ + DV E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 19 PHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 159
P + + E P P + L P T+ P+ V +ASTP S +P
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563
>SB_45193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 191 RRH*EDPEVFIRRYRE--V*FEPV---KHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHF 355
+ H DP FIR Y E +EP + +E + D + VA K+ QN DG H
Sbjct: 220 KTHKSDPVAFIRGYHEYMTEWEPALEDVYKLMREPTNIKDPNAVAIRKSRQNGDDGDGHP 279
Query: 356 D 358
D
Sbjct: 280 D 280
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 28.3 bits (60), Expect = 7.2
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 184 LKTSPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQD 363
+ SPL R Y+T RS + A+ D+ Q R + +S P P ++ Q+
Sbjct: 199 ISASPLMRSSEQYTTPQRSYM---SANNDT-------QMRSVNRQS-PSPFSQN-YFPQE 246
Query: 364 SDEAHDDGRKEST-APDRSYRSGEGKEQIPERHR 462
S H R ST A DR S E +P R++
Sbjct: 247 SHNTHSTNRTSSTSADDRGLSSSEHFPWLPNRYQ 280
>SB_29138| Best HMM Match : Albicidin_res (HMM E-Value=0.26)
Length = 172
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = +2
Query: 191 RRH*EDPEVFIRRYRE--V*FEP-VKHTETQEKNPLPDKD----VVAAEKAHQNLLDGVE 349
+ H DP FIRRY E +EP ++ + P KD + EKA + ++DG
Sbjct: 20 KTHKSDPVAFIRRYHEYMTEWEPAIEDVYKLMREPTNIKDPNAVAIVREKADKTVMDGDG 79
Query: 350 H 352
H
Sbjct: 80 H 80
>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2484
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 220 YSTVSRSLIRA--SEAHRDSGEEPASGQRRCRSG 315
Y R +++A SE + +EP +G RR RSG
Sbjct: 891 YQRFRRMIVKAETSEEETEEADEPPTGHRRARSG 924
>SB_15442| Best HMM Match : rve (HMM E-Value=0.00084)
Length = 822
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +2
Query: 191 RRH*EDPEVFIRRYRE--V*FEP-VKHTETQEKNPLPDKD----VVAAEKAHQNLLDGVE 349
+ H DP FIR Y E +EP ++ + P KD +A EKA + ++DG
Sbjct: 690 KTHKSDPVAFIRGYHEYMTEWEPALEDVYKLMRQPTNIKDPNAVAIAREKADKTVMDGDV 749
Query: 350 HFDKTQMKHTTTEEK 394
+ +Q + T EK
Sbjct: 750 GYQISQEQRPTNCEK 764
>SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)
Length = 859
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 SEAHR-DSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAP-DRSYRS 426
SE R D+G +S R S ES E + + T +D D D R+ +++P D S R
Sbjct: 2 SECERLDNGVALSSMSSRQTSTESLEENIRKILTSCEDDDNEFLDRRRSTSSPEDVSNRK 61
Query: 427 GEGKEQIPERHRE 465
G+G + E ++
Sbjct: 62 GKGSPKEVENGKK 74
>SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3)
Length = 334
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +1
Query: 274 GEEPASGQRR----CRSGESPPEPLGRS*T-LRQDSDEAHDDGRK---ESTAPDRSYRSG 429
GEEP+S S + P P+ + + +D D+ +G + ES A DRS+ SG
Sbjct: 181 GEEPSSRTETPDLYILSNDIPTSPVDEAPLPVDEDDDDEQVNGLRMLPESVALDRSHESG 240
Query: 430 EGKEQIP 450
G +P
Sbjct: 241 RGTPHLP 247
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,871,091
Number of Sequences: 59808
Number of extensions: 511680
Number of successful extensions: 1765
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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