Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20776
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.64 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.5  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   1.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.9  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   2.6  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   4.5  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 22/100 (22%), Positives = 41/100 (41%)
 Frame = +1

Query: 79  KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASE 258
           K+   SP + R  S +  P++ V S+P       L   +P ++P    +  S+ L ++ +
Sbjct: 347 KSCSISPVSDRSESVSPVPSLPVRSSPEPSPVL-LRSPTPAKKPLISVAPASKLLSKSLQ 405

Query: 259 AHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAH 378
                        R+ R+G  PP  +  S +  + S   H
Sbjct: 406 PSTLPTRPSPKSSRKRRTGHRPPAGMNASMSSGKRSTATH 445


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +1

Query: 184 LKTSPLRRPRSLYSTVSRSLIRASEAH-RDSGEEPASGQRRCRSGESPPEP 333
           L  S   R RSL  +VSRS  R S +  R S     S  R  RS    P P
Sbjct: 413 LSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLP 463


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 576 TRKCISLVSPYFNIDVSQIDLRRPLQVLFLFLYNGNTAWAMAAYSKPRIL 725
           TR C+  +     +D S   + R +Q L ++LYN  T   +A + +  I+
Sbjct: 133 TRLCLPQIFNNILMDFSVEQINRSIQELMIYLYN-CTDQQLAEFKRANII 181


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = -1

Query: 706 YAAIAQAVLPLYKNKNKTCNGRRKSI*LTSILKYGD 599
           Y  + QAVLPL KN N  CN  R+SI L  I++  D
Sbjct: 536 YIVLVQAVLPLDKNLN-DCN--RQSI-LGRIIRVTD 567


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -1

Query: 517 GASLLARFRVLQLSGIEVLDAVQEFVLFLLRFDSFDRGQWILF 389
           GAS++ +  + ++  + V+D     V+F + F +F+ G WI +
Sbjct: 416 GASVI-KASIPKIKDVNVIDKYSR-VIFPVSFAAFNAGYWIFY 456


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 367 LSLVEVFNSVQEVLVGFLRCDNVFV 293
           LS  ++ +S+  +L+G  RCD V +
Sbjct: 108 LSRPQMRSSINYLLIGLARCDTVLI 132


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 183 QTEAQSFHWCRRHGD 139
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 708 CTPPLPRQCCH 676
           C  P PR+CCH
Sbjct: 193 CFGPKPRECCH 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,131
Number of Sequences: 2352
Number of extensions: 15386
Number of successful extensions: 42
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)