Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20776
(769 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)... 36 0.030
At1g80080.1 68414.m09374 leucine-rich repeat family protein cont... 31 0.85
At2g30530.1 68415.m03718 expressed protein 31 1.1
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 30 2.0
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 29 4.5
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 29 4.5
At3g53640.1 68416.m05925 protein kinase family protein contains ... 29 4.5
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi... 29 4.5
At5g16120.1 68418.m01883 hydrolase, alpha/beta fold family prote... 28 6.0
At3g10720.2 68416.m01291 pectinesterase, putative contains simil... 28 6.0
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 28 6.0
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 28 6.0
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 6.0
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 28 6.0
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 28 7.9
At5g06710.2 68418.m00759 homeobox-leucine zipper protein 14 (HAT... 28 7.9
At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 28 7.9
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 28 7.9
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 28 7.9
At1g63600.1 68414.m07189 protein kinase-related low similarity t... 28 7.9
>At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)
nearly identical to SF2/ASF-like splicing modulator
Srp30 [Arabidopsis thaliana] GI:4775270
Length = 268
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 85 SPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL--KTSPLRRPRSLYSTVSRSLIRASE 258
SP ++ R S++ P+ S +S R + ++ PL R RSLYS+VSRS R+
Sbjct: 193 SPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPLSRSRSLYSSVSRSQSRSKS 252
Query: 259 AHRDSGEEPAS 291
R P S
Sbjct: 253 RSRSRSNSPVS 263
>At1g80080.1 68414.m09374 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 496
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +1
Query: 199 LRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAH 378
+RR LY+ + R S+ G + S R C + S P P G L ++ D A
Sbjct: 401 MRRKLRLYNNAGLCVNRDSDLDDAFGSKSGSTVRLCDAETSRPAPSGTVQHLSREEDGAL 460
Query: 379 DDGRKESTAPDRS 417
DG + ++ +S
Sbjct: 461 PDGATDVSSTSKS 473
>At2g30530.1 68415.m03718 expressed protein
Length = 371
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 154 TPMKRLCFRLLKT-SPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRCRSGESPPE 330
TP R+ + + SP S S+++ IRAS AHRDS A +PP+
Sbjct: 28 TPTTRMSYSSSSSPSPSSASSSAASSLAAKAIRASSAHRDSSLSSAYSSPSSAPVPTPPK 87
Query: 331 PLGRS 345
+ ++
Sbjct: 88 EVNKA 92
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 897
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +1
Query: 232 SRSLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPD 411
S+ R S +S ++ R R SP R SDE+ DD +++S++
Sbjct: 782 SKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKR 841
Query: 412 RSYRSGEGKEQIPERHRELRS 474
++ GK + RH RS
Sbjct: 842 KNRSPSPGKSR--RRHVSSRS 860
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 254 LARIKLLDTVE*RLLGLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLG 87
L R+ + + + ++ G+ +KHNL IG+D AG + + LQ C ++G
Sbjct: 25 LFRVLCVGPIPTNISFIMDGNRRFAKKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 28.7 bits (61), Expect = 4.5
Identities = 38/126 (30%), Positives = 50/126 (39%)
Frame = +1
Query: 142 SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRCRSGES 321
S++ +P RL R L SP+R PR +VSRS +R+S + P RR R S
Sbjct: 546 SLSRSPT-RLSRRSLSRSPIRSPR---KSVSRSPVRSS--RKSVSRSPVRSSRR-RISRS 598
Query: 322 PPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AEAHGNV 501
P RS R S +P R R + + R R RS +V
Sbjct: 599 PV----RSSRKSVSRSPIRLSRRSISRSPIRLSRRSISRSPVRGRRRISRSPVPARRRSV 654
Query: 502 REDSLP 519
R S P
Sbjct: 655 RPRSPP 660
>At3g53640.1 68416.m05925 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 642
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Frame = +1
Query: 238 SLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRS 417
+L + R+S + G+ S GR + D+ D GR+E +
Sbjct: 73 NLKKKGSIDRESNRDNYRGRSSRDKARSSSRETGRENERERRKDQDRDRGRREDQSDQEI 132
Query: 418 YRS-----GEGKEQIPERHRELRSH--*AEAHGNVREDSLPTKD 528
Y+S GE + + L+SH E GNV + D
Sbjct: 133 YKSGGDGYGEVRHDAEDDLDSLKSHKPNGETQGNVERSEVDNDD 176
>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 786
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 54 SVSDTPSLKDLPKVATDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVATEKTQKS 218
S+ + + DLPK+ + SQ E + S +DT E ++ P+AED E S
Sbjct: 78 SLEEVTNADDLPKIDDEKNSQFETSPHPSPSPSVALDTEEGLINPTAEDTVEENIVSS 135
>At5g16120.1 68418.m01883 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 351
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 248 EPVKHTETQEKNPLPDKDVVAAEKAHQNLLDG 343
+P E EK PDK +V E A+ +LL+G
Sbjct: 288 DPSVSRELYEKAKSPDKKIVLYENAYHSLLEG 319
>At3g10720.2 68416.m01291 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 619
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 16 LPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL--- 186
LP + ++S + P + PP P P + S++ +P+++ STP +LC +L
Sbjct: 43 LPFEPPVESPFFPP--SQPPIFVPPSQPPS-LPPSQSQSPSLACKSTPYPKLCRTILNAV 99
Query: 187 KTSPLRRPRSLYSTVSRSLIRAS 255
K+SP R T+ + L +AS
Sbjct: 100 KSSPSDPYRYGKFTIKQCLKQAS 122
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +1
Query: 232 SRSLIRASEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPD 411
S+ R S +S ++ R R SP R SDE+ DD +++S++
Sbjct: 812 SKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKR 871
Query: 412 RSYRSGEGKEQ 444
++ GK +
Sbjct: 872 KNRSPSPGKSR 882
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 317 KAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTE 496
++++N+ +HFDK + TT+E + L+ ++ + ++ + E
Sbjct: 446 ESNENVYKAFQHFDKDGSGYITTDELEAALKEYGMGDDATIKEILSDVDADNDGRINYDE 505
Query: 497 TCEKTRS--PQRTSL 535
C RS PQ+ L
Sbjct: 506 FCAMMRSGNPQQPRL 520
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +1
Query: 91 RSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASEAHRD 270
RSP SS++S+ + S S+P + + ++ R S S+ SRS+ S +
Sbjct: 9 RSPSVSGSSSRSSSRSRS-GSSPSRSIS----RSRSRSRSLSSSSSPSRSVSSGSRSPPR 63
Query: 271 SGEEPASGQRRCRSGESPP 327
G+ PA RR RS PP
Sbjct: 64 RGKSPAGPARRGRSPPPPP 82
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +1
Query: 91 RSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASEAHRD 270
RSP SS++S+ + S S+P + + ++ R S S+ SRS+ S +
Sbjct: 9 RSPSVSGSSSRSSSRSRS-GSSPSRSIS----RSRSRSRSLSSSSSPSRSVSSGSRSPPR 63
Query: 271 SGEEPASGQRRCRSGESPP 327
G+ PA RR RS PP
Sbjct: 64 RGKSPAGPARRGRSPPPPP 82
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 54 SVSDTPS--LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 206
S SD+PS L+D+ ++ +LK L+G + VDTN AED A E+
Sbjct: 532 SDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTN-----LDAEDRAAER 579
>At5g06710.2 68418.m00759 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 237
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 115 SSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASG 294
+SK + P+VS TST K L F + RSL S+ S S+ E + + S
Sbjct: 21 NSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSSPSV--EDEKKKPAPRAKKSD 78
Query: 295 QRRCRSGESPP 327
+ R S PP
Sbjct: 79 EFRVSSSVDPP 89
>At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 336
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 115 SSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASG 294
+SK + P+VS TST K L F + RSL S+ S S+ E + + S
Sbjct: 21 NSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSSPSV--EDEKKKPAPRAKKSD 78
Query: 295 QRRCRSGESPP 327
+ R S PP
Sbjct: 79 EFRVSSSVDPP 89
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 27.9 bits (59), Expect = 7.9
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +1
Query: 190 TSPLRRPRSLYSTVSRSLIRASEAHRDSGEEPASGQRRC-RSGESPPEPLGRS*TLRQDS 366
+S RR RS+ +S SE R + + G+++ R+G P + +D
Sbjct: 587 SSSSRRSRSVSPKKRKSGQEDSELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDD 646
Query: 367 DEAHDDGRKESTAPDRSYRSGEGKEQIPERHR--ELRSH*AEAHGNVREDSLPTKDVIEQ 540
+E R S + RS E I ++ R EL+ H + RED T+D
Sbjct: 647 EENKVKRRTRSRS-----RSVEDSADIKDKSRDEELKHHKKRSRSRSREDRSKTRDTSRN 701
Query: 541 EKSA 552
A
Sbjct: 702 SDEA 705
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/67 (19%), Positives = 29/67 (43%)
Frame = +2
Query: 317 KAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTE 496
++++NL +HFDK + T +E + L+ +++ + ++ + E
Sbjct: 464 ESNENLYKAFQHFDKDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDNDGRINYEE 523
Query: 497 TCEKTRS 517
C RS
Sbjct: 524 FCAMMRS 530
>At1g63600.1 68414.m07189 protein kinase-related low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 302
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 726 IKSGVCCTPPL-PRQCCHCTKTKIKLVMDDANRSDLHQY*NTAILARY 586
I S C+P L PR C C K ++ +++ N+S Q L RY
Sbjct: 201 IDSMAQCSPDLDPRNCTTCLKLAVQEMLECCNQSRWAQIFTPKCLLRY 248
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,591,858
Number of Sequences: 28952
Number of extensions: 347196
Number of successful extensions: 1199
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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