Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20773
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.7  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   8.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 158 LFYCCYTSVLKCLYFEILYTRFLFCLN*FYVPTLSQFLFTLDLL 27
           + +  +   L C+Y+ ++   FL C+  FY   +   +FT+ LL
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFI---IFTVHLL 161


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/46 (21%), Positives = 23/46 (50%)
 Frame = +2

Query: 113 RSTNILKHLCNNNRTISSFIKRNANVTSNITFCRHAHNIKSKDTID 250
           + TN+ K   N+N  +  ++ +N + T N  + ++ +N +     D
Sbjct: 316 KETNLEKSNLNHNEQLRKYLCKNEDETKN-HYSKNTYNEQGNKLAD 360


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/46 (21%), Positives = 23/46 (50%)
 Frame = +2

Query: 113 RSTNILKHLCNNNRTISSFIKRNANVTSNITFCRHAHNIKSKDTID 250
           + TN+ K   N+N  +  ++ +N + T N  + ++ +N +     D
Sbjct: 208 KETNLEKSNLNHNEQLRKYLCKNEDETKN-HYSKNTYNEQGNKLAD 252


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 666 CITGNLKSMYLC 631
           CIT +L S+Y C
Sbjct: 235 CITSSLSSLYTC 246


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 116 STNILKHLCNNNRTISSFIKRNAN 187
           ST++  HLCN     S+ I  N N
Sbjct: 204 STSMRSHLCNWGSANSTNIVSNGN 227


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 116 STNILKHLCNNNRTISSFIKRNAN 187
           ST++  HLCN     S+ I  N N
Sbjct: 364 STSMRSHLCNWGSANSTNIVSNGN 387


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 116 STNILKHLCNNNRTISSFIKRNAN 187
           ST++  HLCN     S+ I  N N
Sbjct: 364 STSMRSHLCNWGSANSTNIVSNGN 387


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 62  LGHKINSNKIKNVCTVFRSTNILKHLCN 145
           LG +IN  +   VC VF  T      CN
Sbjct: 407 LGLEINHKEDFRVCLVFTLTGPFFTFCN 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,661
Number of Sequences: 336
Number of extensions: 4343
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)