Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20773
(815 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.5
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.9
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 5.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 5.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 7.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 7.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 7.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 7.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 7.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 7.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 7.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 7.8
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 1.5
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +2
Query: 539 HHNKLKSFKSAEKVAFNLKNYQKPKEQLRMQHRYIDLRFPVMQNNLRTRSQMLHKMRRFL 718
H KL +FK E+ Q ++Q + QH I+ + P Q + + Q + ++
Sbjct: 402 HSEKLLAFKMTEQQQQMQAQQQHQQQQQQTQH-VINAQQPQQQQQQQQQQQQQQQQQQQQ 460
Query: 719 VENYGFIEVETPTLFAGHQVVL-ENLLSPL 805
+++ E + + V L E + SPL
Sbjct: 461 QQHWPMEEEPAASWGSASDVTLDEAVKSPL 490
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 509 VTVSPGLMETMPSICTTDSSCKLDK 435
V++ P + PS+ + S+CK DK
Sbjct: 560 VSLLPLPLARTPSVMSASSTCKKDK 584
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 539 HHNKLKSFKSAEKVAFNLKN 598
HH L+ + V FN+KN
Sbjct: 238 HHEALQEAVPGDNVGFNVKN 257
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 539 HHNKLKSFKSAEKVAFNLKN 598
HH L+ + V FN+KN
Sbjct: 295 HHEALQEAVPGDNVGFNVKN 314
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 587 NLKNYQKPKE---QLRMQHRYIDLRFPVMQNNLRTRSQM 694
N+ NY E QLR + IDLR + L+ R ++
Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREV 42
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 310 PKNVGERVVICGWVQYSRLSKFLLLRD 390
P + GE+V +C + S FLLL +
Sbjct: 274 PSDSGEKVSLCSSILLSLTVFFLLLAE 300
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,294
Number of Sequences: 438
Number of extensions: 4566
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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