Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20772
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 100 1e-21
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 100 1e-21
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 100 1e-21
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 100 1e-21
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 98 2e-21
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 98 2e-21
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 98 2e-21
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 97 4e-21
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 0.96
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 27 5.1
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 27 6.8
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 27 6.8
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 27 6.8
Z46794-9|CAA86781.1| 99|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 99.5 bits (237), Expect = 1e-21
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFR 270
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 271 MDSLLL 288
D L++
Sbjct: 64 GDFLIV 69
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASA
Sbjct: 56 FKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLQGGAKKVIISAPSADAPM 135
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 99.5 bits (237), Expect = 1e-21
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFR 270
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 271 MDSLLL 288
D L++
Sbjct: 64 GDFLIV 69
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASA
Sbjct: 56 FKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLQGGAKKVIISAPSADAPM 135
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 99.5 bits (237), Expect = 1e-21
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFR 270
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 271 MDSLLL 288
D L++
Sbjct: 64 GDFLIV 69
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASA
Sbjct: 56 FKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLQGGAKKVIISAPSADAPM 135
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 99.5 bits (237), Expect = 1e-21
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFR 270
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 271 MDSLLL 288
D L++
Sbjct: 64 GDFLIV 69
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASA
Sbjct: 56 FKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLQGGAKKVIISAPSADAPM 135
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 99.5 bits (237), Expect = 1e-21
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFR 270
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 271 MDSLLL 288
D L++
Sbjct: 64 GDFLIV 69
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASA
Sbjct: 56 FKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLQGGAKKVIISAPSADAPM 135
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 98.3 bits (234), Expect = 2e-21
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +1
Query: 100 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFRMD 276
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG + D
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 277 SLLL 288
LL+
Sbjct: 66 YLLV 69
Score = 97.5 bits (232), Expect = 4e-21
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V + +L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+A
Sbjct: 56 FKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLKGGAKKVIISAPSADAPM 135
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 98.3 bits (234), Expect = 2e-21
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +1
Query: 100 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFRMD 276
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG + D
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 277 SLLL 288
LL+
Sbjct: 66 YLLV 69
Score = 97.5 bits (232), Expect = 4e-21
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V + +L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+A
Sbjct: 56 FKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLKGGAKKVIISAPSADAPM 135
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 98.3 bits (234), Expect = 2e-21
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +1
Query: 100 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFRMD 276
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG + D
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 277 SLLL 288
LL+
Sbjct: 66 YLLV 69
Score = 97.5 bits (232), Expect = 4e-21
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V + +L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+A
Sbjct: 56 FKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLKGGAKKVIISAPSADAPM 135
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 97.5 bits (232), Expect = 4e-21
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Frame = +3
Query: 246 F*GSVEVQDGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASA 410
F G+V + +L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+A
Sbjct: 56 FKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANA 115
Query: 411 HLEGGAKKVIISAPSADAPM 470
HL+GGAKKVIISAPSADAPM
Sbjct: 116 HLKGGAKKVIISAPSADAPM 135
Score = 95.5 bits (227), Expect = 2e-20
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +1
Query: 100 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGVLRFRMD 276
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG + D
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 277 SLLL 288
LL+
Sbjct: 66 YLLV 69
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 0.96
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 105 NQWIWPHWPFGAP 143
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 197 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMFSASYR 72
PM S T + S+E+ TKR R NP+ P FD+ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 197 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMFSASYR 72
PM S T + S+E+ TKR R NP+ P FD+ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -1
Query: 437 NFFSTSLQVSRCFICSGKDTSRLYNIFSPSFSPRNGLRVPF*ENSNFV 294
N L + RCF S D SRL I + S + +P +SN V
Sbjct: 38 NVIKNGLPLHRCFTLSSSDISRLKVIRGATQSTQKSQPLPVQNSSNSV 85
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +3
Query: 309 FSERDPKAIPWGKAGAEYVVESTGVFT----TTDKASAHLEGGAKKVIISAPSADAP 467
F E DP+ + W KA + V E F TT G A SAPSA AP
Sbjct: 945 FKETDPRHVEWTKAW-KAVFEEMQKFVRQVHTTGLVWNSAPGAAPDASASAPSAAAP 1000
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +3
Query: 309 FSERDPKAIPWGKAGAEYVVESTGVFT----TTDKASAHLEGGAKKVIISAPSADAP 467
F E DP+ + W KA + V E F TT G A SAPSA AP
Sbjct: 184 FKETDPRHVEWTKAW-KAVFEEMQKFVRQVHTTGLVWNSAPGAAPDASASAPSAAAP 239
>Z46794-9|CAA86781.1| 99|Caenorhabditis elegans Hypothetical
protein R06F6.11 protein.
Length = 99
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 400 LSVVVKTPVDSTTYSAPAFPHGMALGSLSEKTA 302
LSV V VD T + PA H +ALG +++A
Sbjct: 11 LSVSVSANVDMTGFGLPADNHKVALGGPIQESA 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,534,130
Number of Sequences: 27780
Number of extensions: 245784
Number of successful extensions: 635
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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