Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20770
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007129-1|AAP35793.1| 410|Homo sapiens COX15 homolog, cytochro... 122 1e-27
BC078161-1|AAH78161.1| 410|Homo sapiens COX15 homolog, cytochro... 122 1e-27
BC013403-1|AAH13403.1| 410|Homo sapiens COX15 homolog, cytochro... 122 1e-27
BC002382-1|AAH02382.3| 410|Homo sapiens COX15 homolog, cytochro... 122 1e-27
AL133353-4|CAB88198.1| 410|Homo sapiens COX15 homolog, cytochro... 122 1e-27
AL133353-3|CAB88197.1| 388|Homo sapiens COX15 homolog, cytochro... 122 1e-27
AF044323-1|AAD08646.1| 388|Homo sapiens cytochrome c oxidase as... 122 1e-27
AF026850-1|AAD08639.1| 410|Homo sapiens cytochrome oxidase asse... 122 1e-27
BX537557-1|CAD97781.1| 410|Homo sapiens hypothetical protein pr... 120 5e-27
AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein. 30 7.0
>BT007129-1|AAP35793.1| 410|Homo sapiens COX15 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 410
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>BC078161-1|AAH78161.1| 410|Homo sapiens COX15 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 410
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>BC013403-1|AAH13403.1| 410|Homo sapiens COX15 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 410
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>BC002382-1|AAH02382.3| 410|Homo sapiens COX15 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 410
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>AL133353-4|CAB88198.1| 410|Homo sapiens COX15 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 410
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>AL133353-3|CAB88197.1| 388|Homo sapiens COX15 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 388
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>AF044323-1|AAD08646.1| 388|Homo sapiens cytochrome c oxidase
assembly protein COX15 protein.
Length = 388
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>AF026850-1|AAD08639.1| 410|Homo sapiens cytochrome oxidase
assembly factor protein.
Length = 410
Score = 122 bits (293), Expect = 1e-27
Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRLTESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLTESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>BX537557-1|CAD97781.1| 410|Homo sapiens hypothetical protein
protein.
Length = 410
Score = 120 bits (288), Expect = 5e-27
Identities = 52/85 (61%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
+ VG WLL CSG V AV+LGGVTRL ESGLSMV W L+ E K PT++EEW+ EF++YQQ
Sbjct: 67 RVVGRWLLVCSGTVAGAVILGGVTRLAESGLSMVDWHLIKEMKPPTSQEEWEAEFQRYQQ 126
Query: 435 YPEFKYKNQNITFSDFKWIWYMEFA 509
+PEFK N ++T ++FK+IWYME++
Sbjct: 127 FPEFKILNHDMTLTEFKFIWYMEYS 151
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGML 583
HR WGR +G LPAAYFW +G L
Sbjct: 152 HRMWGRLVGLVYILPAAYFWRKGWL 176
>AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein.
Length = 2849
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2
Query: 361 VTIDKPDSVSRVTPPSTTAVKTIPLHPSSQYPTAFESS 248
VT++ P V+R P+ T+ + +PL P S +PT+ SS
Sbjct: 213 VTMETPTKVAR---PTQTSSQRVPLWPISHFPTSPRSS 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,927,278
Number of Sequences: 237096
Number of extensions: 1644696
Number of successful extensions: 4627
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4618
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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