Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20770
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical pr... 111 3e-25
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 33 0.15
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 31 0.61
U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 29 2.5
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 29 2.5
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 29 3.3
U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical... 29 3.3
Z68334-2|CAA92728.2| 797|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z54216-10|CAA90949.2| 797|Caenorhabditis elegans Hypothetical p... 28 4.3
AF173174-1|AAF13167.1| 796|Caenorhabditis elegans CLC chloride ... 28 4.3
AB035090-1|BAA86959.1| 797|Caenorhabditis elegans clc chloride ... 28 4.3
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 27 7.5
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 27 7.5
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 27 7.5
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 27 10.0
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 27 10.0
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 27 10.0
>Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical
protein T06D8.5 protein.
Length = 395
Score = 111 bits (268), Expect = 3e-25
Identities = 48/86 (55%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
Frame = +3
Query: 258 KAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQKEFEKYQQ 434
K +G+WL+GC+GM + AV LGGVTRLTESGLSMV W L K P +++W++EFEKY+
Sbjct: 49 KRIGWWLMGCAGMCYGAVALGGVTRLTESGLSMVNWDLFRTMKPPFGQKQWEEEFEKYKA 108
Query: 435 YPEFKYK--NQNITFSDFKWIWYMEF 506
YPE+KYK ++ +T ++FK+IW ME+
Sbjct: 109 YPEYKYKSSSEEMTLNEFKFIWSMEY 134
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 509 HRTWGRAIGAAMFLPAAYFWYRGMLLP 589
HR WGRAIG +P AYFW RG P
Sbjct: 136 HRMWGRAIGIVFLIPCAYFWARGRFAP 162
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 127 SRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPKPKTQKQLDTGY 279
S + +R N G +SL+S + N ++R C ++PK +++ LD+ Y
Sbjct: 747 SNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK-CSEEDLDSAY 796
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 127 SRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPKPKTQKQLDTGY 279
S + +R N G +SL+S + N ++R C ++PK +++ LD+ Y
Sbjct: 467 SNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK-CSEEDLDSAY 516
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 399 EEWQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEFATEPGAELL 533
EE +K +K +Y + I F+ F WI+Y+++A ELL
Sbjct: 428 EENRKNAQKIDRYSRALFPLAFIIFNIFYWIYYLKYAGSNSPELL 472
>U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical
protein B0554.7 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 273 WLLGCSGMVFTAVVLGGVTRLTE 341
W +GC ++ A++LGG+T ++E
Sbjct: 146 WAIGCGSLILGAMILGGMTWISE 168
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 381 KMPTNEEEWQKEFEKYQQYPEFKYKNQNIT 470
K PT E+ QKEFE ++ E+ K +N T
Sbjct: 1527 KRPTEEQNLQKEFELTKKEEEYSVKMENRT 1556
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 381 KMPTNEEEWQKEFEKYQQYPEFKYKNQNIT 470
K PT E+ QKEFE ++ E+ K +N T
Sbjct: 1527 KRPTEEQNLQKEFELTKKEEEYSVKMENRT 1556
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 417 FEKYQQYPEFKY----KNQNITFSDFKWIWYMEF 506
F+ Y++YP F Y I +DF WI Y+ F
Sbjct: 683 FDPYKKYPVFHYVYGGPGIQIVHNDFSWIQYIRF 716
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 417 FEKYQQYPEFKY----KNQNITFSDFKWIWYMEF 506
F+ Y++YP F Y I +DF WI Y+ F
Sbjct: 687 FDPYKKYPVFHYVYGGPGIQIVHNDFSWIQYIRF 720
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore complex
protein protein12 protein.
Length = 1847
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -2
Query: 355 IDKPDSVSRVTPPSTTAVKTIPLHPSSQYPTAFESS 248
++ PD+ + + P + + V ++ +HP+ + +AFE+S
Sbjct: 1269 VNSPDNETVLIPVTVSRVASLDVHPTIELKSAFENS 1304
>U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical
protein R05H11.1 protein.
Length = 476
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 120 YYFKAN-YHNYKNAQI*HPRKIKSKQHNKIKQ-YYNAIL 230
YY K++ + NY + HP+++KS Q + I Q Y N +L
Sbjct: 107 YYLKSSKFQNYMFCKRSHPKEVKSLQPSTIPQNYINGML 145
>AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical
protein Y39B6A.47 protein.
Length = 887
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = -2
Query: 355 IDKPDSVSRVTPPSTTAVKTIPLHPSSQYPTAFESS 248
++ PD+ + + P + + V ++ +HP+ + +AFE+S
Sbjct: 835 VNSPDNETVLIPVTVSRVASLDVHPTIELKSAFENS 870
>Z68334-2|CAA92728.2| 797|Caenorhabditis elegans Hypothetical
protein C07H4.2 protein.
Length = 797
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 282 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 377
G MV A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574
>Z54216-10|CAA90949.2| 797|Caenorhabditis elegans Hypothetical
protein C07H4.2 protein.
Length = 797
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 282 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 377
G MV A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574
>AF173174-1|AAF13167.1| 796|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 282 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 377
G MV A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574
>AB035090-1|BAA86959.1| 797|Caenorhabditis elegans clc chloride
channel homologue protein.
Length = 797
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 282 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 377
G MV A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 67 SAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLSSTI 201
S+ K+ +S G N + +I TT+THRY IL +S I
Sbjct: 319 SSKDRKMKMSETEGRMNDLTV--VIDTTQTHRYTILKDMSFEIPI 361
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 303 TAVVLGGVTRLTESGLSMV---TWRLLGEKMPTNEEEWQKEFEKYQQYPEFKY 452
T++ L G+ L + ++V +W+LL P + E + E+Y++ + Y
Sbjct: 385 TSLALSGIQLLCQWSCAVVETISWKLLNPTNPKDNRECPENAEEYERATRYNY 437
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 303 TAVVLGGVTRLTESGLSMV---TWRLLGEKMPTNEEEWQKEFEKYQQYPEFKY 452
T++ L G+ L + ++V +W+LL P + E + E+Y++ + Y
Sbjct: 385 TSLALSGIQLLCQWSCAVVETISWKLLNPTNPKDNRECPENAEEYERATRYNY 437
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 67 SAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLSSTI 201
S+ K+ +S G N + +I TT+THRY IL +S I
Sbjct: 319 SSKDRKMKMSETEGRMNDLTV--VIDTTQTHRYTILKDMSFEIPI 361
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical protein
C18H2.1 protein.
Length = 1770
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 393 NEEEWQKEFEKYQQYPEFKYKNQNI 467
NEE+ +E K++ YP KY N+
Sbjct: 1383 NEEDTDRELTKWEYYPFIKYYRVNL 1407
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase
2 protein.
Length = 1668
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 366 RLLGEKMPTNEEE-WQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEF 506
R +G+ EEE ++EF Y Y + +NQ D W+ +F
Sbjct: 455 RFIGDAGENEEEEPEEEEFSSYNIYSNYVERNQLTMAYDALWLVIFQF 502
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 366 RLLGEKMPTNEEE-WQKEFEKYQQYPEFKYKNQNITFSDFKWIWYMEF 506
R +G+ EEE ++EF Y Y + +NQ D W+ +F
Sbjct: 455 RFIGDAGENEEEEPEEEEFSSYNIYSNYVERNQLTMAYDALWLVIFQF 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,502,401
Number of Sequences: 27780
Number of extensions: 237670
Number of successful extensions: 829
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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