Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20768
(735 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 111 8e-26
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 66 5e-12
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 52 9e-08
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 44 3e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 40 3e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.001
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 34 0.024
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.032
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.032
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 33 0.056
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.52
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.52
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 28 1.6
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 2.1
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 3.7
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.8
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 6.4
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 8.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 111 bits (268), Expect = 8e-26
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRG
Sbjct: 34 GGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRG 93
Query: 433 NFANVIRYFPTQALNFAFKDKYKQV 507
N ANV+RYFPTQALNFAFKDK+K++
Sbjct: 94 NTANVLRYFPTQALNFAFKDKFKKM 118
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 591 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLY 734
SL FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLY
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLY 195
Score = 34.3 bits (75), Expect = 0.018
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L GG + A S V ++ + L S + ++++ G+VD + + + GL +
Sbjct: 136 LASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLY 195
Query: 427 RGNFANVIRYFPTQALNFAFKDKYKQV 507
RG +V+ + L F D K V
Sbjct: 196 RGFGPSVVGIVVYRGLYFGMYDTLKPV 222
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 66.1 bits (154), Expect = 5e-12
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 27 GGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGN 79
Query: 436 FANVIRYFPTQALNFAFKDKYKQ 504
N +R FP A+ FA + KQ
Sbjct: 80 GTNCLRAFPYGAVQFATFNMLKQ 102
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG + + +T P + ++ QV + YK I A I K +G+ F+RG
Sbjct: 233 GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGY 289
Query: 436 FANVIRYFPTQALNF 480
+N+++ P ++ +
Sbjct: 290 SSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 52.0 bits (119), Expect = 9e-08
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL ++G+
Sbjct: 24 GGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGH 82
Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507
A + R FP + F ++ ++V
Sbjct: 83 TATLYRVFPYAGIKFVAYEQVRRV 106
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GGI+ VS+T AP++R+K++L + + + + ++ + G+ SF+ GN
Sbjct: 134 GGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGN 192
Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507
NV++ P ++ F + K+V
Sbjct: 193 GINVLKVMPESSIKFGTYEAMKRV 216
Score = 41.9 bits (94), Expect = 9e-05
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 436 FANVIRYFPTQALNFAFKDKYKQ 504
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
Score = 31.1 bits (67), Expect = 0.17
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRG 432
GG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 235 GGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRG 290
Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRR 531
++ FP A + + K+ L R
Sbjct: 291 VLVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 40.3 bits (90), Expect = 3e-04
Identities = 24/84 (28%), Positives = 45/84 (53%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 211 GGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGI 269
Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507
++ P A+++A + K++
Sbjct: 270 RPRMVVAMPATAVSWAAYEAGKEI 293
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +1
Query: 286 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 456
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 457 FPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLV 558
P +AL FA D Y ++ R+ SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 603 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
+YPLD +TR+ VGK D ++G +C+ KI K++G LY
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLY 65
Score = 33.9 bits (74), Expect = 0.024
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 259 GISAAVSKT-AVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
G A ++T V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTR 528
A + R+ A F K + + A +R
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIRNSLTPASSR 195
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.9 bits (74), Expect = 0.024
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW G
Sbjct: 210 GSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGA 263
Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507
+ R + + F +K ++
Sbjct: 264 TPRLARLILSGGIVFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.5 bits (73), Expect = 0.032
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L G GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 427 RGNFANVIRYFPTQALNF 480
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
Score = 27.5 bits (58), Expect = 2.1
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVS----KQIAADQ-----RYKGIVDAFV---RIP 399
GG++ + A AP++ VK LQ KQ A + Y+ +D + +
Sbjct: 55 GGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNVK 114
Query: 400 KEQGLLSFWRGNFANVIRYFPTQALNF 480
+G + +RG N+I P +++NF
Sbjct: 115 VHEGTRALFRGLGPNLIGTIPARSINF 141
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.5 bits (73), Expect = 0.032
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 244 GLPGGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLS 420
G GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 26 GFLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRG 85
Query: 421 FWRG 432
RG
Sbjct: 86 LQRG 89
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 32.7 bits (71), Expect = 0.056
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WRGN
Sbjct: 23 GGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWRGN 71
Query: 436 FANVIRYFPTQALNFAFKDKYKQVS 510
+ Y A F K K ++
Sbjct: 72 VVAELLYLVYGAAEFVAFSKLKHLT 96
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G I+ A SK + P++ V LQ YK D F+ I + G+ +RG
Sbjct: 199 GVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYRGL 250
Query: 436 FANVIRYFP 462
++++ P
Sbjct: 251 SVSMLKVAP 259
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.5 bits (63), Expect = 0.52
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQGLLSFW 426
GG + S VAP++ VK Q Q + G + + I +G+ +
Sbjct: 12 GGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLY 71
Query: 427 RGNFANVIRYFPTQALNFAFKDKYK 501
RG ++ Y P+ ++ F +K K
Sbjct: 72 RGVGPMMLGYLPSWSIYFVVYEKCK 96
Score = 28.7 bits (61), Expect = 0.91
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 349 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 447
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.52
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
G IS + V P+E V++ LQ+Q K + Y G D +I + GL +G
Sbjct: 119 GAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 597 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLY
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLY 263
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 669 HAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRS 547
H P R R RD RS +RS R HR DY RS
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRS 177
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/95 (20%), Positives = 39/95 (41%)
Frame = +1
Query: 253 GGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
GG ++ + +A+ P++ +K QV Y G + F I ++GL + G
Sbjct: 29 GGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAGFKTILSKEGLRGLYTG 80
Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRS 537
+I Y + F + +K S + +++
Sbjct: 81 GMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKA 115
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 85 YEITPNLLFKNQELVFRDPPSACAATPTSTY 177
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 389 TKASTIPL*RWSAAICLLTCCTWSSSLTRSIGATAV 282
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 373 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 465
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,685,565
Number of Sequences: 5004
Number of extensions: 50786
Number of successful extensions: 183
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -