Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20768
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 56 4e-08
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 52 5e-07
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 44 1e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 42 5e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 40 0.003
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 39 0.004
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.011
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 37 0.015
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.026
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.026
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.034
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.079
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.079
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.079
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.18
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.42
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.73
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.73
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.97
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.7
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 30 2.2
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.2
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.0
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.0
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 3.0
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.9
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 29 5.2
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 5.2
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 6.8
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.0
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 101 bits (243), Expect = 5e-22
Identities = 50/82 (60%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN
Sbjct: 17 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGN 76
Query: 436 FANVIRYFPTQALNFAFKDKYK 501
AN IRYFPTQALNFAFKD+ K
Sbjct: 77 LANCIRYFPTQALNFAFKDQVK 98
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 591 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLY
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLY 176
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 361 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 507
+YKG +D ++I K++G +S +G AN++R + F DK+K++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKEL 295
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 81.4 bits (192), Expect = 7e-16
Identities = 38/86 (44%), Positives = 61/86 (70%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L GGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L ++
Sbjct: 38 LLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYF 91
Query: 427 RGNFANVIRYFPTQALNFAFKDKYKQ 504
+GN NVIR FP A+ FA ++YK+
Sbjct: 92 KGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +1
Query: 253 GGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
GGG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRG
Sbjct: 142 GGGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRG 195
Query: 433 NFANVIRYFPTQALNFAFKDKYKQV 507
N ANVI+ P + F +K K++
Sbjct: 196 NGANVIKIAPESGIKFFAYEKAKKL 220
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/85 (24%), Positives = 45/85 (52%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L G ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+
Sbjct: 234 LLAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFY 286
Query: 427 RGNFANVIRYFPTQALNFAFKDKYK 501
RG F +++ P ++ A + K
Sbjct: 287 RGLFPSLLGIIPYAGIDLAVYETLK 311
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 606 YPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLY 734
YPL RTRL A KG GQ + + + + KI DG GLY
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLY 387
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 259 GISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 429
G +A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG SA ++++ +P+E VK+L QV + G++ F + K +G+ +FW+GN
Sbjct: 65 GGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGN 117
Query: 436 FANVIRYFPTQALNFA 483
+ IR FP A+ +A
Sbjct: 118 GVSCIRLFPYSAVQYA 133
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 159 GTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGV 215
Query: 436 FANVIRYFP 462
+ + FP
Sbjct: 216 TPSFLGLFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G ++ +AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN
Sbjct: 40 GSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGN 98
Query: 436 FANVIRYFPTQALNF 480
+R P A+ F
Sbjct: 99 TVTAVRDIPGFAVYF 113
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L GG + VS + P + +K +Q + RYKG++D ++ KE+G++ F
Sbjct: 136 LMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFT 191
Query: 427 RGNFANVIRYFPTQALNF 480
RG + ++R F Q L F
Sbjct: 192 RGIWPTLLRGF-LQVLRF 208
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +1
Query: 262 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 441
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 442 NVIRYFPTQALNFAFKDKYKQVSS 513
++ P +A+ D + + S
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIFS 1003
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 588 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
T VYP+D +TR+ + ++ + +C K+ +++G IGLY
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLY 974
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 361 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 504
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 606 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
YPLD R R+ + +G+G ++S + I +S+G IGL+
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLF 740
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 217 PRRSGRVR*GLPGGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAF 387
P + V L G +S +SK + P + +K +QVQ + Q+Y G+ D F
Sbjct: 23 PYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCF 82
Query: 388 VRIPKEQGLLSFWRG 432
I KE+G + ++G
Sbjct: 83 RTILKEEGAMGLFKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 428 GTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +1
Query: 262 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 441
IS + A P++ K +Q + I YKG +D RI + +G+ + W+G
Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTP 158
Query: 442 NVIRYFPTQALNFAFKDKYKQVSS 513
R P L F F ++ + ++
Sbjct: 159 YYFRIGPHTVLTFIFLEQLNRAAN 182
Score = 35.1 bits (77), Expect = 0.060
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 364 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 507
Y + +A R+ KE+G+L+ WRG +R A A + KQ+
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQL 82
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GGI+ +S P++ VK Q + +Y G D +I G+ +F +G
Sbjct: 364 GGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGL 423
Query: 436 FANVIRYFPTQA 471
A ++R FPT A
Sbjct: 424 LATILRGFPTNA 435
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 591 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGL 722
S YP+D ++ AD G Q +++G +C+ KI+ S G+
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGV 416
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Frame = +1
Query: 259 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQG 411
GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G
Sbjct: 22 GIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEG 81
Query: 412 LLSFWRGNFANVIRYFPTQALNFAFKDKYK 501
+ + ++G + R ++ D+ K
Sbjct: 82 MKTMYKGLIPGIHRQLCFASIRIGLYDQVK 111
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 GLPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LS 420
G GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 175 GFVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRG 231
Query: 421 FWRGNFANVIRYFPTQALNFAFKDKYKQ 504
+RG N +R P A+ F + KQ
Sbjct: 232 LYRGLSINYLRVCPQVAIMFGVYEVTKQ 259
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 373 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 507
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +3
Query: 588 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
T+ YPLD R+RLA V + G + CIS K G LY
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALY 123
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 346 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 480
I ++Y G+++AF RI +++G+ +F+RG +I P ++F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISF 63
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 588 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
T+ YPLD R RLA +++++GL N ++I++ +G+ Y
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFY 45
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 259 GISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 121 GVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 154 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGGGISAAVSKTAVAPIERVKLLLQV 327
AA + T P+ DH + N E R G V L ++ V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 328 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 453
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L G +S + A P++ +K+ LQ + K +KG +D F++ + +GL +
Sbjct: 24 LIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLY 82
Query: 427 RGNFANVIRYFPTQALNF 480
+G + ++ P+ AL F
Sbjct: 83 KGMLSPLLMATPSTALTF 100
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 292 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 624 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLY 734
R + V K G + + GLG+C+ +++++ GL G++
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVF 220
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.045
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 376 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 501
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 34.7 bits (76), Expect = 0.079
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 588 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFY 265
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L G ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F+
Sbjct: 209 LGAGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFY 265
Query: 427 RGNFANVIRYFP 462
+G +I P
Sbjct: 266 KGAVPRMIVIAP 277
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.079
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 295 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 474
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 475 NFAFKDKYKQV 507
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 34.7 bits (76), Expect = 0.079
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L G I+ + + P++RVK +LQ++ + Y G VD RI +E G+ +
Sbjct: 141 LAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVY 196
Query: 427 RGNFANVIRYFP 462
+G +R P
Sbjct: 197 KGISVTAMRDIP 208
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G + A + P++ +K+ LQ + K YK D F +I + +G+ +RG
Sbjct: 45 GSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGV 103
Query: 436 FANVIRYFPTQALNFA 483
++ P + F+
Sbjct: 104 TVPILNSIPNTTVLFS 119
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 394 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 507
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 394 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSG 543
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ ++G
Sbjct: 35 GATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKGL 92
Query: 436 FANVIRYFP 462
+++ P
Sbjct: 93 VPSLVSIAP 101
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GGI+ + P E VK LQ+ + AA Y+G +D + K G+L +RG
Sbjct: 47 GGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGL 102
Query: 436 FANVIRYFPTQALNFA 483
+ + P ++ FA
Sbjct: 103 SSLLYGSVPKASVRFA 118
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 594 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
+C +P ++ +T+L D + + + G +C+ K K G++GLY
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLY 99
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 250 PGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 429
P G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 60 PPLGLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 220 RRSGRVR*-GLPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 396
R+ GR R L G S+ VA ER +L+ Q Q +D RY+G +D+F
Sbjct: 258 RQHGRGRGITLEGNDRGKRQSRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGD 317
Query: 397 PKEQGLLSFWRGN 435
+ +G L +RG+
Sbjct: 318 ARYRGHLDSFRGD 330
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 394 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGV 546
+P+E L + G ++VI F A+N F+++YK+V A R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/102 (21%), Positives = 43/102 (42%)
Frame = +1
Query: 175 YSPSEDHIIEQNVEPRRSGRVR*GLPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 354
Y + +++ + + RR V + GIS ++ + P E + L+ Q +
Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968
Query: 355 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 480
Q+Y+ + +E+G + G +VIR P A+ F
Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMF 1010
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 588 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 734
TSLC YP + ARTRL + G++++ + + + +G GLY
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLY 992
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRG 432
G +A + P E +K LQ QH + I+ K G++D ++I + G +RG
Sbjct: 113 GSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRG 172
Query: 433 NFANVIRYFP 462
A R P
Sbjct: 173 MTATWAREVP 182
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 588 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLY 734
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LY
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALY 57
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +1
Query: 244 GLPGGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 423
G GG ++ V +T P++ + L +Q Q + KG + G F
Sbjct: 108 GFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGGF 164
Query: 424 WRGNFANVIRYFPTQALNFA 483
++G FA+++ Y P+ A+ +A
Sbjct: 165 YKGYFASLMTYAPSSAIWWA 184
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 370 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 507
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 645 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 523
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +1
Query: 256 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 4 GACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSY 55
Query: 436 FANVIRYFPTQALNF 480
+ P Q L+F
Sbjct: 56 TTQLSMNIPFQTLHF 70
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 394 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSG 543
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 682 RPENSRWPSPLPTSAARRVRAKSRGYTK 599
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 606 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLY 734
+PLD + RL G++ F+G +C K +++G GLY
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLY 88
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 416
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 416
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 406 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSS 540
Q LLS +A+ I Y+P LN +D +S R+RSS
Sbjct: 412 QFLLSIADSLYADAIHYWPLDQLNITLRDSPLPHASLKTLRKRSS 456
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVAPIERVKLLLQ 324
+ GG++ S+T AP+E++K++ Q
Sbjct: 173 MSAGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 416
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 416
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +1
Query: 121 ELVFRDPPSA----CAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGGGISAAVSKTA 288
E + RDP + A+P S I EQNVE S + G+ G + T
Sbjct: 269 EALTRDPKESDTNVSRASPDSHLQTVISEIREQNVELVESSPIEAGVDGETPAPDEKSTD 328
Query: 289 VAPIERVKLLLQVQHVSK-QIA 351
VAPI V LQ + ++ QIA
Sbjct: 329 VAPISEVADALQEKEENEPQIA 350
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 43 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 186
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,235,106
Number of Sequences: 59808
Number of extensions: 436281
Number of successful extensions: 1402
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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