Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20767
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    28   0.37 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   3.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.9  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 6/39 (15%)
 Frame = +2

Query: 347  TEDDLKILDDLYPEVTPK------HELNEEGQSGFHLQI 445
            T+ +LKILDD+ PE+T +      H+L E+G+ G + ++
Sbjct: 1029 TKRELKILDDIMPEMTKRARADDLHQL-EDGEVGIYRRL 1066


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = +1

Query: 28  YRDLQKAGKELNSDQKVAVA------KYDEVAQTLEFARD 129
           +  L  AG+EL+S  KVA+        YD +  TLE   D
Sbjct: 125 FSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSD 164


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 494  EVLGTHTYELRRLYQQFMNVDT 559
            ++L TH  +L RL+++F  +DT
Sbjct: 1692 QLLDTHVEKLDRLFKEFNVLDT 1713


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,391
Number of Sequences: 2352
Number of extensions: 10967
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)