Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20767
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016057-1|AAV36942.1|  961|Drosophila melanogaster LP14942p pro...    67   3e-11
AE014296-3038|AAG22572.1|  961|Drosophila melanogaster CG18811-P...    67   3e-11

>BT016057-1|AAV36942.1|  961|Drosophila melanogaster LP14942p
           protein.
          Length = 961

 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = +1

Query: 1   EKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSKQVTAIAISSERE 174
           EKRK+KL SYR +Q +GKEL+ DQ  AVAKYD V   LEFAR+L+K +   +  +E+E
Sbjct: 124 EKRKTKLESYRAIQSSGKELSGDQASAVAKYDAVLANLEFARELAKHIQQQSKEAEKE 181



 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 31/100 (31%), Positives = 51/100 (51%)
 Frame = +2

Query: 251 KKVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSG 430
           ++VL+I + L        R+DF+NG NGA KL   +L++L+  + E   +     +  S 
Sbjct: 202 REVLIIQNVLNCFNDDQVRSDFLNGENGAKKLENTELELLEKFFIETQTRRPETADDVS- 260

Query: 431 FHLQITRAAEHLYSIIDGKPKEVLGTHTYELRRLYQQFMN 550
           F     ++AE  YS I+ +PK        +LR L+QQ  +
Sbjct: 261 FIATAQKSAELFYSTINARPKSFGEVSFEKLRSLFQQIQD 300


>AE014296-3038|AAG22572.1|  961|Drosophila melanogaster CG18811-PA
           protein.
          Length = 961

 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = +1

Query: 1   EKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSKQVTAIAISSERE 174
           EKRK+KL SYR +Q +GKEL+ DQ  AVAKYD V   LEFAR+L+K +   +  +E+E
Sbjct: 124 EKRKTKLESYRAIQSSGKELSGDQASAVAKYDAVLANLEFARELAKHIQQQSKEAEKE 181



 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 31/100 (31%), Positives = 51/100 (51%)
 Frame = +2

Query: 251 KKVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSG 430
           ++VL+I + L        R+DF+NG NGA KL   +L++L+  + E   +     +  S 
Sbjct: 202 REVLIIQNVLNCFNDDQVRSDFLNGENGAKKLENTELELLEKFFIETQTRRPETADDVS- 260

Query: 431 FHLQITRAAEHLYSIIDGKPKEVLGTHTYELRRLYQQFMN 550
           F     ++AE  YS I+ +PK        +LR L+QQ  +
Sbjct: 261 FIATAQKSAELFYSTINARPKSFGEVSFEKLRSLFQQIQD 300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,134,695
Number of Sequences: 53049
Number of extensions: 453548
Number of successful extensions: 1169
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)