Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20767
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    35   0.074
Z74029-2|CAA98432.1|  334|Caenorhabditis elegans Hypothetical pr...    31   0.91 
AL132848-5|CAB60389.2|  702|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z69383-2|CAA93408.2|  318|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AF068709-10|AAC19252.2|  345|Caenorhabditis elegans Seven tm rec...    28   8.5  

>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 34.7 bits (76), Expect = 0.074
 Identities = 25/83 (30%), Positives = 41/83 (49%)
 Frame = -1

Query: 414 SFNSCLGVTSGYKSSKIFKSSSVNLAAPFVPFMKSVLASALPICIRQSRISKTFLFCWSL 235
           S N CL   +   +S+IF  +  N+ AP +  + S ++ A+ ICIR S I + FL     
Sbjct: 142 SLNRCLSFGAKPLNSRIFDGA--NVVAPVLLALSSSISCAV-ICIRSSSIERHFLPTTGF 198

Query: 234 LHNEPRLPKFKTELFSLFFCLTL 166
           ++ E +L      +  +FF   L
Sbjct: 199 INIETKLNWVSLFINRMFFIFPL 221


>Z74029-2|CAA98432.1|  334|Caenorhabditis elegans Hypothetical
           protein C45B11.4 protein.
          Length = 334

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 666 WHIYFWFMFTLFMHLFFYWNMTFFYFCDCTIYSFIKVS 553
           WH Y W MFT  + +  +  + FF+ C C  Y +   +
Sbjct: 208 WHTYLW-MFTTIIVIGIFIQVAFFFLC-CLYYIYFSTT 243


>AL132848-5|CAB60389.2|  702|Caenorhabditis elegans Hypothetical
           protein Y47H10A.1 protein.
          Length = 702

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 356 DLKILDDLYPEVTPKHELNEEGQSG-FHLQITRAAEHLYSIIDGKPKEVLGTHTY 517
           +L + D+L+  V P  +   E  +G FH Q  R  E +  +ID +   V GT  Y
Sbjct: 278 NLSLRDELFYRVVPPDQSFTEKYAGIFHFQFWRYGEWVDVVIDDRLPTVNGTLCY 332


>Z69383-2|CAA93408.2|  318|Caenorhabditis elegans Hypothetical
           protein F13E9.5 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 356 DLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYSIIDGKPK 493
           +LK  DD +P+   K E N E     H  +T   +  ++   GKP+
Sbjct: 38  NLKKFDDAFPKPNKKKEANMEFGELMHKYLTMRPDGRFATWHGKPQ 83


>AF068709-10|AAC19252.2|  345|Caenorhabditis elegans Seven tm
           receptor protein 33 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -1

Query: 672 TNWHIYFWFMFTLFMHLFFYWNMTFFYFCDCTIYSFIK 559
           T W + FW  + +F    +  ++ F  F D   Y++I+
Sbjct: 130 TGWKLVFWVFYVIFFGFAWSASVYFCLFPDTYSYNYIR 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,396,474
Number of Sequences: 27780
Number of extensions: 255253
Number of successful extensions: 776
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)