Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20766
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        28   0.090
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 105 PGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPLTN 215
           PG+   P  P L H I+ NP  + ++  S NL PL N
Sbjct: 328 PGHSTSPNLP-LTHNIAHNPYPSHSIYPSSNLMPLNN 363


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 525 PVSYCVSMSHSCLTPSCLP 469
           P+ YC+  +H C T   LP
Sbjct: 304 PIIYCLFSTHFCRTLGSLP 322


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 87  AAVQGPPGNKQWPARPGL 140
           AAVQ P G ++  ARPG+
Sbjct: 32  AAVQVPQGGRRRAARPGV 49


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 591 LLWFRDVRRNVWILRWFEIRSPP 523
           L+WF +V   + IL   EIR  P
Sbjct: 192 LIWFDEVVNELRILHGVEIRDYP 214


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/33 (24%), Positives = 13/33 (39%)
 Frame = -2

Query: 567 RNVWILRWFEIRSPPVSYCVSMSHSCLTPSCLP 469
           R  ++L W+   S     C   +  C    C+P
Sbjct: 58  RYTFLLEWYHTLSKACYDCPYNTQDCYREDCIP 90


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 593 ISAYSWFNCKTELCSLY 643
           +SA  WF  +T  C L+
Sbjct: 137 LSAGDWFTSRTSACGLF 153


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 521  TGGDRISNHRNIHTFRLTSRNQRSI 595
            +G DRI   + IH     ++ +R I
Sbjct: 1407 SGPDRIGRRKTIHNLERAAQKKRQI 1431


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 521  TGGDRISNHRNIHTFRLTSRNQRSI 595
            +G DRI   + IH     ++ +R I
Sbjct: 1407 SGPDRIGRRKTIHNLERAAQKKRQI 1431


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 521  TGGDRISNHRNIHTFRLTSRNQRSI 595
            +G DRI   + IH     ++ +R I
Sbjct: 1407 SGPDRIGRRKTIHNLERAAQKKRQI 1431


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 521  TGGDRISNHRNIHTFRLTSRNQRSI 595
            +G DRI   + IH     ++ +R I
Sbjct: 1407 SGPDRIGRRKTIHNLERAAQKKRQI 1431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,425
Number of Sequences: 336
Number of extensions: 3983
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)