Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20766
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456919-1|CAG33200.1|  227|Homo sapiens CPSF5 protein.               154   4e-37
BX537360-1|CAD97606.1|  227|Homo sapiens hypothetical protein pr...   154   4e-37
BC001403-1|AAH01403.1|  227|Homo sapiens nudix (nucleoside dipho...   154   4e-37
AJ001810-1|CAA05026.1|  227|Homo sapiens pre-mRNA cleavage facto...   154   4e-37

>CR456919-1|CAG33200.1|  227|Homo sapiens CPSF5 protein.
          Length = 227

 Score =  154 bits (373), Expect = 4e-37
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = +1

Query: 514 IGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDN 693
           IGNWWRPNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDN
Sbjct: 145 IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204

Query: 694 AQGYGPIISSLSQ 732
           A GYGPIISSL Q
Sbjct: 205 APGYGPIISSLPQ 217



 Score =  153 bits (372), Expect = 5e-37
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 SVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEI 436
           SV ARFQRMREEF KIGMRR+VEGVL+VHEH LPHVLLLQLGT FFKLPGGELNPGEDE+
Sbjct: 59  SVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEV 118

Query: 437 DGLKRLLTETLGRQDGVKQEWLIE 508
           +GLKRL+TE LGRQDGV Q+W+I+
Sbjct: 119 EGLKRLMTEILGRQDGVLQDWVID 142



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = +3

Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEK 251
           LTL R+INLYPLTNYTFGTKEPL+EK
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEK 56


>BX537360-1|CAD97606.1|  227|Homo sapiens hypothetical protein
           protein.
          Length = 227

 Score =  154 bits (373), Expect = 4e-37
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = +1

Query: 514 IGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDN 693
           IGNWWRPNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDN
Sbjct: 145 IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204

Query: 694 AQGYGPIISSLSQ 732
           A GYGPIISSL Q
Sbjct: 205 APGYGPIISSLPQ 217



 Score =  151 bits (367), Expect = 2e-36
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 SVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEI 436
           SV ARFQRMREEF KIGMRR+VEGVL+VHEH LPHVLLLQLGT FFKLPGGEL+PGEDE+
Sbjct: 59  SVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELDPGEDEV 118

Query: 437 DGLKRLLTETLGRQDGVKQEWLIE 508
           +GLKRL+TE LGRQDGV Q+W+I+
Sbjct: 119 EGLKRLMTEILGRQDGVLQDWVID 142



 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKD 254
           LTL R+INLYPLTNYTFGTKEPL+EKD
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKD 57


>BC001403-1|AAH01403.1|  227|Homo sapiens nudix (nucleoside
           diphosphate linked moiety X)-type motif 21 protein.
          Length = 227

 Score =  154 bits (373), Expect = 4e-37
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = +1

Query: 514 IGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDN 693
           IGNWWRPNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDN
Sbjct: 145 IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204

Query: 694 AQGYGPIISSLSQ 732
           A GYGPIISSL Q
Sbjct: 205 APGYGPIISSLPQ 217



 Score =  153 bits (372), Expect = 5e-37
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 SVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEI 436
           SV ARFQRMREEF KIGMRR+VEGVL+VHEH LPHVLLLQLGT FFKLPGGELNPGEDE+
Sbjct: 59  SVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEV 118

Query: 437 DGLKRLLTETLGRQDGVKQEWLIE 508
           +GLKRL+TE LGRQDGV Q+W+I+
Sbjct: 119 EGLKRLMTEILGRQDGVLQDWVID 142



 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKD 254
           LTL R+INLYPLTNYTFGTKEPL+EKD
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKD 57


>AJ001810-1|CAA05026.1|  227|Homo sapiens pre-mRNA cleavage factor I
           25 kDa subunit protein.
          Length = 227

 Score =  154 bits (373), Expect = 4e-37
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = +1

Query: 514 IGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDN 693
           IGNWWRPNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDN
Sbjct: 145 IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDN 204

Query: 694 AQGYGPIISSLSQ 732
           A GYGPIISSL Q
Sbjct: 205 APGYGPIISSLPQ 217



 Score =  153 bits (372), Expect = 5e-37
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 SVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEI 436
           SV ARFQRMREEF KIGMRR+VEGVL+VHEH LPHVLLLQLGT FFKLPGGELNPGEDE+
Sbjct: 59  SVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEV 118

Query: 437 DGLKRLLTETLGRQDGVKQEWLIE 508
           +GLKRL+TE LGRQDGV Q+W+I+
Sbjct: 119 EGLKRLMTEILGRQDGVLQDWVID 142



 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKD 254
           LTL R+INLYPLTNYTFGTKEPL+EKD
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKD 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,949,149
Number of Sequences: 237096
Number of extensions: 2421029
Number of successful extensions: 10511
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10501
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)