Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20764
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   5.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 433 SQTRLIPKCPSGTSPLWEGFSLI 501
           S + + P+CPSG S L E  +L+
Sbjct: 90  SDSLVQPRCPSGESMLSERAALL 112


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 184 WTGWCSRNP 210
           W  WCS+NP
Sbjct: 571 WPLWCSQNP 579


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 200 LHHPVHQILAIQHH 159
           LHHP+HQ + I H+
Sbjct: 42  LHHPIHQTV-IYHN 54


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 79  DESSFTSSPVSPLTPTKPCSP 17
           DE SFT  P  PL+     SP
Sbjct: 529 DEISFTFPPSPPLSQIHDLSP 549


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,235
Number of Sequences: 336
Number of extensions: 3964
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)