Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20764
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 3e-27
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 64 8e-11
SB_39426| Best HMM Match : C4 (HMM E-Value=0) 58 7e-09
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 51 1e-06
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 50 1e-06
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 50 2e-06
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 50 2e-06
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 50 2e-06
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 49 3e-06
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 48 8e-06
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 48 1e-05
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 48 1e-05
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 44 1e-04
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 44 1e-04
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 44 1e-04
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 44 1e-04
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 44 1e-04
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 44 2e-04
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 43 2e-04
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 43 3e-04
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 42 5e-04
SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05) 42 7e-04
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 41 0.001
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 41 0.001
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 41 0.001
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 39 0.004
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 39 0.004
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 39 0.005
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 35 0.059
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 35 0.078
SB_47682| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 35 0.078
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 33 0.24
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 33 0.24
SB_24263| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 33 0.32
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 33 0.32
SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07) 32 0.42
SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 32 0.42
SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35) 32 0.42
SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018) 32 0.42
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 31 0.73
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 31 0.73
SB_33143| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 31 0.73
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 31 0.73
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 31 0.96
SB_29112| Best HMM Match : Mucin (HMM E-Value=1.7) 31 0.96
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 31 0.96
SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84) 31 1.3
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04) 31 1.3
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 30 1.7
SB_37097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31) 30 1.7
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 30 1.7
SB_35408| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078) 30 2.2
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 30 2.2
SB_34932| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.38) 30 2.2
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 29 2.9
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 29 2.9
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 29 3.9
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27) 29 3.9
SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 29 3.9
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18) 29 5.1
SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 29 5.1
SB_51279| Best HMM Match : Filament (HMM E-Value=0.092) 28 6.8
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 28 6.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 28 6.8
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 28 6.8
SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17) 28 9.0
SB_38421| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 28 9.0
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 9.0
SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_41085| Best HMM Match : Auxin_repressed (HMM E-Value=9) 28 9.0
SB_13632| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 28 9.0
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 119 bits (286), Expect = 3e-27
Identities = 49/73 (67%), Positives = 60/73 (82%)
Frame = +3
Query: 513 NGKAHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQA 692
N +AHGQDLG+PGSC+++FSTMP+LFCN+NNVC+ A R DYSFWLSTPEP+P M P+Q
Sbjct: 1608 NERAHGQDLGSPGSCIQRFSTMPFLFCNINNVCNLASRNDYSFWLSTPEPIP--MMPVQE 1665
Query: 693 RDVGTYISRCQVC 731
+V YI RC VC
Sbjct: 1666 TNVQPYIGRCAVC 1678
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/63 (47%), Positives = 35/63 (55%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG G PGL G+ GDKGD LP G PG+ G G DG G+ G G G G G+K
Sbjct: 1408 AGEKGSPGLSGLRGDKGDRGLPGP--SGPPGEEGARGSDGFPGIPGSKGERGLIGPKGIK 1465
Query: 248 GQR 256
G+R
Sbjct: 1466 GER 1468
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 465 WNITALGRLFVNSYNANGKAHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDFAQREDYSFW 644
W+ G F+ +A GQ L +PGSCL F P++ C+ C + YSFW
Sbjct: 1744 WSPLWQGYSFLMHTSAGNDGSGQLLSSPGSCLEDFRAHPFIECHGRGTCHY-YGSTYSFW 1802
Query: 645 LSTPEPMPMAMTP----IQARDVGTYISRCQVC 731
L+T + P ++A ++ +SRCQVC
Sbjct: 1803 LATVDQNKQFRIPRPETLKAGNLRERVSRCQVC 1835
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 319 GKRGLKGFVGLHGSVGRXXXXXXXXXXXKSRGFYFTVHSQTRLIPKCPSGTSPLWEGFSL 498
G++G G GL GS+G GF+ T HSQT +P+CP PLWEG+SL
Sbjct: 1548 GEKGATGLPGLTGSIG-----VPGPPGYSDFGFFLTRHSQTVRVPRCPEDRPPLWEGYSL 1602
Query: 499 IHI 507
+++
Sbjct: 1603 LYV 1605
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GPPG+QG++G KGD + PG PG G PG G G G+ G G G G
Sbjct: 940 EDGPRGPPGIQGMKGAKGDAITGPTGPPGPPGLPGRPGLKGERGRDGLDGQNGLPGIPGP 999
Query: 245 KG 250
KG
Sbjct: 1000 KG 1001
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/62 (48%), Positives = 33/62 (53%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G IG PG G +G KGD P PG PG+VG+PG G G G PG G G G KG
Sbjct: 543 GQIGDPGKMGPQGFKGD---PGP--PGPPGEVGVPGAPGMKGPIGKPGPVGDAGAPGEKG 597
Query: 251 QR 256
R
Sbjct: 598 AR 599
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
AG G PGL G +G G LP PG+PG G G G+DG+ G PG+ G G G
Sbjct: 678 AGEPGSPGLPGEDGAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPGPTGE 737
Query: 245 KGQ 253
KG+
Sbjct: 738 KGE 740
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI---------LPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G +GPPG QG G G++ + PG PG GLPG GRDG+ G+ G G
Sbjct: 767 GDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPGTDGLPGAPGRDGIDGVRGPKG 826
Query: 224 RNGYLGVKGQ 253
G G+KG+
Sbjct: 827 EPGSDGMKGE 836
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/64 (45%), Positives = 33/64 (51%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GPPG G G +G P + G PG GL G GRDG+ G PG GR+G G
Sbjct: 868 EPGPAGPPGPLGTPGTQGAKGEPGPL--GTPGRQGLAGPPGRDGMKGDPGPRGRDGLPGE 925
Query: 245 KGQR 256
G R
Sbjct: 926 PGAR 929
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G PG+ G++G+KG +P +PG PG G G G G+ G PG+ G +G G KG
Sbjct: 1328 GETGLPGMPGLDGEKGSAGVPG--IPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPTGPKG 1385
Query: 251 Q 253
+
Sbjct: 1386 E 1386
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G GL GI G KGDT + G PG GLPG G++G G G+ G GY G+ G
Sbjct: 986 GLDGQNGLPGIPGPKGDT---GPV--GPPGRPGLPGPVGKEGPPGEDGNIGEKGYAGLPG 1040
Query: 251 QR 256
R
Sbjct: 1041 PR 1042
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/60 (45%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQP---GDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G GPPG G++GD G D LPG+P GD+G G G DG G PG G G G
Sbjct: 900 GLAGPPGRDGMKGDPGPR--GRDGLPGEPGARGDIGSRGLPGEDGPRGPPGIQGMKGAKG 957
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKG-DTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
E G+ G PG +G G+KG D PGQPG G G +GR G G G+ G G +G
Sbjct: 1032 EKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFPGFKGNQGEKGRMG 1091
Query: 242 VKGQRE 259
G E
Sbjct: 1092 PPGTSE 1097
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
AG G GL G +G+ G D +PGQ G G PG G G+ G PG G+NG G
Sbjct: 1117 AGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPGRDGQNGSPGR 1176
Query: 245 KGQ 253
KG+
Sbjct: 1177 KGE 1179
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQ-------PGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G PG +G +G+KG P PG PG G G GR+G+ G+PG+ G G L
Sbjct: 1076 GFPGFKGNQGEKGRMGPPGTSEPGNVPGPKGDPGPAGPRGPAGRNGIDGLPGTKGEPGSL 1135
Query: 239 GVKGQREK*DYKVLLENQALKGYKVSKVNEG 331
G KG + L N L G + K G
Sbjct: 1136 GEKGDAGIPGQRGLTGNPGLPGAQGLKGEPG 1166
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLP----SDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
IGPPG G G +G T P + + G PG +G PG G G G PG G G +GV
Sbjct: 512 IGPPGPDGDRGPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPPGEVGV 571
Query: 245 KG 250
G
Sbjct: 572 PG 573
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGL---PGFDGRDGVAGIPGSFGRNGYL 238
G +G PG QG +G+ G P L G PG G+ PG GRDG+ G PG+ G G
Sbjct: 876 GPLGTPGTQGAKGEPGPLGTPGRQGLAGPPGRDGMKGDPGPRGRDGLPGEPGARGDIGSR 935
Query: 239 GVKGQ 253
G+ G+
Sbjct: 936 GLPGE 940
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/62 (41%), Positives = 30/62 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G PG G++G G + G G G PG GRDG AG GS G +G G KG
Sbjct: 1367 GLNGNPGAPGVDGPTGPK--GESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKG 1424
Query: 251 QR 256
R
Sbjct: 1425 DR 1426
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 GFIGPPGL-QGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G GPPG G G G T+ PG PG+ G PG G G G PG G G G K
Sbjct: 338 GARGPPGGGSGGSGCNGTTIFKGP--PGAPGEKGEPGKQGEKGEEGRPGLPGAQGIEGPK 395
Query: 248 GQR 256
G+R
Sbjct: 396 GER 398
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/62 (41%), Positives = 30/62 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPGL G G G G+ G G+PG DG G AG+PG G G G KG
Sbjct: 1310 GPAGPPGLPGRAGQAGPK--------GETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKG 1361
Query: 251 QR 256
+
Sbjct: 1362 DQ 1363
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/60 (45%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PGL G +G G+ P L G GD GLPG G G G GS G G G KG+R
Sbjct: 1397 GEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLPGPSGPPGEEGARGSDGFPGIPGSKGER 1456
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G+ G G+KGD+ P + G PG G G++G G G G G +G GV G+R
Sbjct: 1473 GIPGPRGEKGDSGFPG--INGPPGPPGQRGYEGARGPPGAKGQAGEDGRPGVPGRR 1526
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 427 VHSQTRLIPKCPSGTSPLWEGFSLIHITLMEKLTVKISALQVVV---SVNSPQC 579
VHSQ+ +P CPSG SPLW+G+S + + ++S+ + V S+ P C
Sbjct: 1687 VHSQSITVPSCPSGWSPLWQGYSFLMPYIGRCAVCEVSSHVMAVHSQSITVPSC 1740
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G G G G G+KGD +P PG PG GL G GRDG G PG G G
Sbjct: 1124 GLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPA 1183
Query: 239 GVKG 250
G G
Sbjct: 1184 GKNG 1187
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+ G G PGL G +G KG+ PG+ G+ G G +G +G+ G PG G G G
Sbjct: 1146 QRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQG 1205
Query: 242 VKG 250
VKG
Sbjct: 1206 VKG 1208
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/63 (42%), Positives = 32/63 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GP G G +GD+G +PG G G+PG G G AG PG GR G G
Sbjct: 1275 ERGAPGPRGNTGAKGDRG--------IPGLNGLSGIPGERGPVGPAGPPGLPGRAGQAGP 1326
Query: 245 KGQ 253
KG+
Sbjct: 1327 KGE 1329
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 427 VHSQTRLIPKCPSGTSPLWEGFSLI 501
VHSQ+ +P CPSG SPLW+G+S +
Sbjct: 1730 VHSQSITVPSCPSGWSPLWQGYSFL 1754
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAG---IPGSFGRNGYLG 241
G G PG G+ G+ G + S LPG G+ G PG GR G+AG +PG+ G G G
Sbjct: 676 GPAGEPGSPGLPGEDG--AIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPG 733
Query: 242 VKGQR 256
G++
Sbjct: 734 PTGEK 738
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/57 (45%), Positives = 30/57 (52%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPGL G G KG+ D L GQ G G+PG G G G PG G G +G +G
Sbjct: 968 GPPGLPGRPGLKGER--GRDGLDGQNGLPGIPGPKGDTGPVGPPGRPGLPGPVGKEG 1022
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +2
Query: 74 FIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
F GPPG G +G+ G G+ G+ G PG G G+ G G G G G+KG
Sbjct: 358 FKGPPGAPGEKGEPGKQ--------GEKGEEGRPGLPGAQGIEGPKGERGEPGNQGLKGD 409
Query: 254 R 256
R
Sbjct: 410 R 410
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEG-DKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
E G IGP G++G G KG +P G+ GD G PG +G G G G G G G
Sbjct: 1455 ERGLIGPKGIKGERGYGKG---IPGP--RGEKGDSGFPGINGPPGPPGQRGYEGARGPPG 1509
Query: 242 VKGQ 253
KGQ
Sbjct: 1510 AKGQ 1513
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G G++G KGD + LPG G G G +G G+ GI G G G G G
Sbjct: 1196 GPDGPAGVQGVKGDPGVGQPGLPGPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPG 1252
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
+G PGL G G KG+ + PG G G+ G +G G G PG G G G KG +
Sbjct: 1212 VGQPGLPGPAGPKGERGVNG--FPGIKGIQGVQGLEGPPGPPGPPGQIGFTGAKGSKGDQ 1269
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGR------DGVAGIPGSFG 223
+ G +GPPG G+ G G P D G+ G GLPG G DG +G PG+ G
Sbjct: 1002 DTGPVGPPGRPGLPGPVGKEGPPGEDGNIGEKGYAGLPGPRGETGEKGLDGPSGPPGTPG 1061
Query: 224 RNGYLGVKGQREK*DYKVLLENQALKG 304
+ G G +G + + NQ KG
Sbjct: 1062 QPGPPGPRGPEGRQGFPGFKGNQGEKG 1088
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGL---PGFDGRDGVAGIPGSFGRNGYLG 241
G GP G G +G KG+ + D PG PG G+ G G G +G PG G G LG
Sbjct: 820 GVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTGEQGVKGDTGPSGEPGPAGPPGPLG 879
Query: 242 VKG 250
G
Sbjct: 880 TPG 882
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/51 (43%), Positives = 24/51 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
GP G G +G G P D G PGD GL G G G G+PG G G
Sbjct: 614 GPRGPIGEKGPTGFPGPPGDSDYGPPGDKGLKGNTGPPGDEGVPGPIGPKG 664
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +2
Query: 71 GFIGPPGLQGIEGD---KGDTL--LPSDILPGQPGDVGLPGFDGRDGV---AGIPGSFGR 226
G GPPG +G+ G KGD P PG G+ G PG G DG G+PG G
Sbjct: 646 GNTGPPGDEGVPGPIGPKGDKCEACPKPP-PGPAGEPGSPGLPGEDGAIGSRGLPGPSGE 704
Query: 227 NGYLGVKGQ 253
G G G+
Sbjct: 705 PGKPGPAGR 713
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
P L+G++G+ G PG GD G PG +G G+ G G G G G KG
Sbjct: 265 PTLLKGVKGEPGPEGPQGP--PGVRGDTGFPGLNGTQGLPGPKGPPGPTGPEGPKG 318
Score = 35.9 bits (79), Expect = 0.034
Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKG-DTLLPSDILPGQPGDVGLPGFDGRDGVAGI--PGSFGRNGY 235
E G GP G G+ GD G L + LPG G G G +G G GI G G G
Sbjct: 274 EPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPGPTGPEGPKGNMGISFKGPQGMKGD 333
Query: 236 LGVKGQR 256
G KG R
Sbjct: 334 KGTKGAR 340
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAG 205
E G G PG QGIEG KG+ G+PG+ GL G G DG G
Sbjct: 379 EEGRPGLPGAQGIEGPKGER--------GEPGNQGLKGDRGVDGNPG 417
Score = 34.7 bits (76), Expect = 0.078
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGL-----PGFDGRDGVAGIPGSFGRNG 232
G +G PG G++G G D PG+ G GL PG DG+ G G G G G
Sbjct: 567 GEVGVPGAPGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPRGPIGEKGPTG 626
Query: 233 YLGVKGQRE 259
+ G G +
Sbjct: 627 FPGPPGDSD 635
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSF-------G 223
E G G PG++GI+G +G + PG PG G GF G G G G G
Sbjct: 1226 ERGVNGFPGIKGIQGVQG-----LEGPPGPPGPPGQIGFTGAKGSKGDQGELVIERGAPG 1280
Query: 224 RNGYLGVKGQR 256
G G KG R
Sbjct: 1281 PRGNTGAKGDR 1291
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPG------SFGRNGYL 238
G G+ G++G KG+ LP P G+ G GL G G G G+PG G G
Sbjct: 1385 GESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLPGPSGPPGEEGARGSD 1444
Query: 239 GVKGQREK*DYKVLLENQALKG 304
G G + L+ + +KG
Sbjct: 1445 GFPGIPGSKGERGLIGPKGIKG 1466
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/57 (40%), Positives = 25/57 (43%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG G EG KG+ + G GD G G G G G G G NG KG
Sbjct: 306 GPPGPTGPEGPKGNMGISFKGPQGMKGDKGTKGARGPPG--GGSGGSGCNGTTIFKG 360
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGS-FGRNGYL 238
PG+PG G PG GR G G GS N Y+
Sbjct: 458 PGEPGASGRPGIPGRPGTQGAKGSTVSNNSYI 489
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
GP G G G+KG L PG G G G G G G PG G + Y
Sbjct: 585 GPVGDAGAPGEKGARGLSIQGTPGMDGKRGPRGPIGEKGPTGFPGPPGDSDY 636
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPG G G KG +++ + G PG G G G G G NG G+ G+R
Sbjct: 1252 GPPGQIGFTGAKGSKGDQGELVIER----GAPGPRGNTGAKGDRGIPGLNGLSGIPGER 1306
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSD----ILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G GPPG +G G+ G +P + + + G PG +G G G G G G +
Sbjct: 1503 GARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEKGATGLPGLTGSI 1562
Query: 239 GVKG 250
GV G
Sbjct: 1563 GVPG 1566
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
PG+P + G PG PG DG + S P IP PGG
Sbjct: 1315 PGLPGRAGQAGPKGETGLPGMPG--LDGEKGSAGVPGIPGGPGG 1356
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
+ GF G G QG+ G KG P P G G++G+ F G G+ G G+ G G
Sbjct: 289 DTGFPGLNGTQGLPGPKGP---PGPTGPEGPKGNMGI-SFKGPQGMKGDKGTKGARG 341
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G +G +G +G P PG GDVG PG G G+PG +G +G
Sbjct: 746 GEKGAKGQQGGIGNPGP--PGLRGDVGPPG---EQGPTGVPGESWTSGGVG 791
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 80 GPPGLQGIEGDKG-DTLLPSDILPGQPGD---VGLPGFDGRDGVAGIPGSFGRNGYLGV 244
G PG QG++G+ G D S G+PG G+ G DG G G G G G GV
Sbjct: 1154 GLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGV 1212
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDG 187
G PG++G G+KG T LP G G +G+PG G
Sbjct: 1539 GFPGIEGPLGEKGATGLP-----GLTGSIGVPGPPG 1569
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 97.9 bits (233), Expect = 7e-21
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +3
Query: 522 AHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPIQARDV 701
+HGQDLG GSCL++F+TMPYL+CN+ C++A R DYS+WLST +P M PIQA V
Sbjct: 1497 SHGQDLGQAGSCLKRFTTMPYLYCNIFGKCNYASRNDYSYWLSTDNQVP--MMPIQASAV 1554
Query: 702 GTYISRCQVC 731
YISRC VC
Sbjct: 1555 EPYISRCTVC 1564
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 498 NSYNANGKAHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDFAQREDYSFWLSTPE-PMPMA 674
N A G GQ LG+ GSCL F P+ C+ C + + YSFWL+T P
Sbjct: 1581 NHTGAGGSGTGQSLGSSGSCLESFRPNPFTECHGRGTCHYYANK-YSFWLATVNTPFQTQ 1639
Query: 675 MTP-IQARDVGTYISRCQVC 731
+ ++A ++ + +SRCQVC
Sbjct: 1640 QSETLKAGNLLSRVSRCQVC 1659
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G GPPG G G+ G + PG PG GL G GRDG+ G PG G +G +G++
Sbjct: 971 GLSGPPGFDGQAGETGAIGFKGEPGTPGIPGFPGLTGSSGRDGLDGSPGRPGPSGRIGIR 1030
Query: 248 GQRE 259
+++
Sbjct: 1031 DKQQ 1034
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/63 (42%), Positives = 32/63 (50%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG GPPG+ G G KG+ P PG PG+ G G GR G +G G G G G K
Sbjct: 488 AGATGPPGIPGFPGQKGE---PGISRPGPPGENGAFGLPGRKGDSGDRGPDGNPGLPGQK 544
Query: 248 GQR 256
G +
Sbjct: 545 GDK 547
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/57 (47%), Positives = 30/57 (52%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG G G KG+ SD PG PG+ G G G G+AG PG G NG G G
Sbjct: 861 GPPGDNGPRGKKGEA--GSDGRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPG 915
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG +G G G + + L GQ G +G PG +G DG++G PG GR G G KG
Sbjct: 312 GPPGPKGAPGAPGFSGIEG--LKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKG 366
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 65 EAGFIGPPG--LQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
+ GF G PG + G GD G P + G+PGD G PG G+ G G PG G G
Sbjct: 569 QKGFKGDPGDAIPGNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGADGPPGMIGPRGPD 628
Query: 239 GVKG 250
G G
Sbjct: 629 GNNG 632
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GP GL G +G KG P D LPG+PG +G G G G+ G+ G+ G NG G G
Sbjct: 436 GQSGPKGLPGDDGLKGP---PGDGLPGKPGLIGEQGAIGFKGLRGMTGNPGPNGPAGATG 492
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 319 GKRGLKGFVGLHGSVGRXXXXXXXXXXXKSRGFYFTVHSQTRLIPKCPSGTSPLWEGFSL 498
G +G +G G G G+ GFY HSQT P+CP LW+G+SL
Sbjct: 1429 GNKGKEGLPGDDGVPGQPGPPGPPGDGITKVGFYIVKHSQTTTPPECPPTYDKLWDGYSL 1488
Query: 499 IHI 507
+++
Sbjct: 1489 LYV 1491
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAG-----IPGSFGRN 229
++G GP G G+ G KGD L I P G VG GF G+ G G IPG+ G
Sbjct: 528 DSGDRGPDGNPGLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQKGFKGDPGDAIPGNPGDP 587
Query: 230 GYLGVKGQREK 262
G +G G+ ++
Sbjct: 588 GVMGFPGEPQR 598
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPG---DVGLPGFDGRDGVAGIP---GSFGR 226
+AG GPPG G G G L D +PG+PG + G PG G DG++G P G G
Sbjct: 927 DAGPRGPPGEPGPPGPFGAAGL--DGMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAGE 984
Query: 227 NGYLGVKGQ 253
G +G KG+
Sbjct: 985 TGAIGFKGE 993
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPG---FDGRDGVAGIPGSFGRNGYLGVK 247
G PG G++GDKG P D P G PG+ G PG G DG+ G PG+ G +G G++
Sbjct: 909 GEPGDPGMDGDKGPPG-PVDAGPRGPPGEPGPPGPFGAAGLDGMPGKPGAKGESGQPGMR 967
Query: 248 G 250
G
Sbjct: 968 G 968
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 LQGIEGDKGDTLLPS---DILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
+QG+ G++GD P ++ P GQPG G PG G G G+PG G+ G G G
Sbjct: 10 VQGVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIG 66
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLP-SDILPGQPGDVGLPGFDGRD---GVAGIPGSFGRNG 232
E G GPPG +G G +G S LPG+ G G+PG G+ G G PGS G G
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTG 75
Query: 233 YLGVKGQR 256
LG G +
Sbjct: 76 DLGPPGAK 83
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+ G +GPPG +G+ G + LP + G PG G PG G G+ G G G G LG
Sbjct: 73 DTGDLGPPGAKGLPGAQ-QYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLG 131
Query: 242 VKGQ 253
KGQ
Sbjct: 132 PKGQ 135
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTL---LPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G IG PG +G GD G LP G PG +G G G G G PG G NG +G
Sbjct: 63 GTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMG 122
Query: 242 VKG 250
KG
Sbjct: 123 KKG 125
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSD---ILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G QG+ G KG L + + PG+ G G G DG G G PG+ G +G G+KG
Sbjct: 274 GTKGEQGVPGAKGQPGLDREEVVMPPGESGAAGDLGPDGPPGPKGAPGAPGFSGIEGLKG 333
Query: 251 Q 253
Q
Sbjct: 334 Q 334
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNG---YLGVKG 250
PPG G GD G P PG PG G+ G G+ G G PG G +G Y GV G
Sbjct: 298 PPGESGAAGDLGPDGPPGPKGAPGAPGFSGIEGLKGQSGPLGDPGDNGIDGISGYPGVPG 357
Query: 251 QR 256
++
Sbjct: 358 RK 359
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPG +G G+ G P + PG G G G G G G+ G+ G+ G G KG++
Sbjct: 223 GPPGPKGKRGETGPRGRPGE--PGADGVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQ 279
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP---------GQPGDVGLPGFDGRDGVAGIPGSFG 223
G G PG +G G+ GD + D P G PG+ G PG G G+ G+PG G
Sbjct: 897 GLAGSPGPRGPNGEPGDPGMDGDKGPPGPVDAGPRGPPGEPGPPGPFGAAGLDGMPGKPG 956
Query: 224 RNGYLGVKGQR 256
G G G R
Sbjct: 957 AKGESGQPGMR 967
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
AG G PG G +G+ G + +D L G PG G G G G G PG+ G G+ G+
Sbjct: 946 AGLDGMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGIPGFPGL 1005
Query: 245 KG 250
G
Sbjct: 1006 TG 1007
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPG-LQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG + G G +GD +PS ++ G PG PG G G G+PG G G G G
Sbjct: 1397 GPPGTISGPPGIRGDPGIPS-VVRGPPGK---PGLSGNKGKEGLPGDDGVPGQPGPPG 1450
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G IG G G +GD G L P PG PG + +PG G DG G G G G G+KG
Sbjct: 113 GIIGMNGAMGKKGDTGP-LGPKG-QPGSPG-IDIPGPKGMDGPPGEKGLPGVQGDPGIKG 169
Query: 251 QR 256
+
Sbjct: 170 PK 171
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G G +G G LP D L G PGD GLP G+ G+ G G+ G G G+ G
Sbjct: 427 GPRGPDGRDGQSGPKGLPGDDGLKGPPGD-GLP---GKPGLIGEQGAIGFKGLRGMTG 480
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/64 (42%), Positives = 31/64 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G IGPPG G +G K DT PG PG G G G G G PG+ G G G
Sbjct: 198 DQGPIGPPGRPGPKGPK-DTCPRCP--PGPPGPKGKRGETGPRGRPGEPGADGVRGPDGS 254
Query: 245 KGQR 256
G+R
Sbjct: 255 TGER 258
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
GP G G+ G++G +P G PG +G PG G G G PG+ G G
Sbjct: 36 GPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTGDLGPPGAKGLPG 87
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
PPG G +G +G+T P G+PG+ G G G DG G G G +G G KG+
Sbjct: 221 PPGPPGPKGKRGETG-PR----GRPGEPGADGVRGPDGSTGERGETGLDGAPGKKGE 272
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS-DILPGQPGD----VGLP--GFDGRDGVAGIPGSFG 223
++G +G PG GI+G G +P PGQ GD V +P G G+ G G PG G
Sbjct: 334 QSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGEKGQSGEPGFPGEIG 393
Query: 224 RNGYLGVKG 250
G G KG
Sbjct: 394 EAGTQGEKG 402
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G +G PG + G+ GD P LPGQ G G PG G G G G G G G+
Sbjct: 586 DPGVMGFPG-EPQRGEPGDPGRPG--LPGQTGADGPPGMIGPRGPDGNNGPQGEGGPNGI 642
Query: 245 KGQ 253
KG+
Sbjct: 643 KGK 645
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G G+ G G KG++ P + G G G PGFDG+ G G G G G G+ G
Sbjct: 944 GAAGLDGMPGKPGAKGESGQPG--MRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGIPG 1001
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/56 (42%), Positives = 25/56 (44%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
EAG G PG G G G LPG PG G PG G +G G PG G G
Sbjct: 874 EAGSDGRPGFPGESGANG--------LPGPPGLAGSPGPRGPNGEPGDPGMDGDKG 921
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/54 (38%), Positives = 24/54 (44%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
G G PGL G +G G L + G PG G G G G+ G PG G G
Sbjct: 456 GLPGKPGLIGEQGAIGFKGLRG--MTGNPGPNGPAGATGPPGIPGFPGQKGEPG 507
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G +G G G P + G PG GL G G G G PG G +G G G
Sbjct: 867 GPRGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPG 924
Score = 31.9 bits (69), Expect = 0.55
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG-V 244
GF G P +G GD G LP G PG +G G DG +G G G G G G +
Sbjct: 591 GFPGEPQ-RGEPGDPGRPGLPGQTGADGPPGMIGPRGPDGNNGPQGEGGPNGIKGKPGNI 649
Query: 245 KGQREK*DYKVLLE 286
++ DY L++
Sbjct: 650 LCGQDPADYAFLVD 663
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGL---PGFDGRDGV---AGIPGSFGRNG 232
G PG G+ G G T G+ G+ GL PG G DG G+PG+ G+ G
Sbjct: 241 GEPGADGVRGPDGST--------GERGETGLDGAPGKKGEDGTKGEQGVPGAKGQPG 289
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDIL------------PGQPGDVGLPGFDGRDGVAGI 208
E GF G G G +G+KG+ P+ I+ G+ G G G DG+ G G+
Sbjct: 385 EPGFPGEIGEAGTQGEKGNPP-PTPIIIKYKGPKGTSGAQGKEGPRGPDGRDGQSGPKGL 443
Query: 209 PGSFGRNG 232
PG G G
Sbjct: 444 PGDDGLKG 451
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 186 PSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P NPG+P G PG+ G P P +P + G P
Sbjct: 581 PGNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGADGPP 619
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISD-GSRVSPLSPSIPCRPG---- 85
P P P + +PGI SRP PG + G PG+ D G R +P +P + G
Sbjct: 494 PGIPGFPGQKGEPGI----SRPGPPGENGAFGLPGRKGDSGDRGPDGNPGLPGQKGDKGL 549
Query: 84 -GPMNP 70
GP+ P
Sbjct: 550 LGPIGP 555
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -2
Query: 222 PKDP--GIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P +P G P P RP PG + G PG I G R P + P GGP
Sbjct: 593 PGEPQRGEPGDPGRPGLPGQTGADGPPGMI--GPR-GPDGNNGPQGEGGP 639
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 64.5 bits (150), Expect = 8e-11
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +3
Query: 522 AHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDFAQREDYS 638
+HGQDLG GSCL++F+TMPYL+CN+ C++A R DYS
Sbjct: 101 SHGQDLGQAGSCLKRFTTMPYLYCNIFGKCNYASRNDYS 139
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 319 GKRGLKGFVGLHGSVGRXXXXXXXXXXXKSRGFYFTVHSQTRLIPKCPSGTSPLWEGFSL 498
G +G +G G G G+ GFY HSQT P+CP LW+G+SL
Sbjct: 33 GNKGKEGLPGDDGVPGQPGPPGPPGDGITKVGFYIVKHSQTTTPPECPPTYDKLWDGYSL 92
Query: 499 IHI 507
+++
Sbjct: 93 LYV 95
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 PPG-LQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PPG + G G +GD +PS ++ G PG GLPG G++G+ G G G+ G G G
Sbjct: 2 PPGTISGPPGIRGDPGIPS-VVRGPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPG 57
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDG 187
GPPG G+ G+KG LP D +PGQPG G PG DG
Sbjct: 24 GPPGKPGLPGNKGKEGLPGDDGVPGQPGPPGPPG-DG 59
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = -2
Query: 216 DPGIPAT----PSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIP 97
DPGIP+ P +P PGN G PG DG P P P
Sbjct: 15 DPGIPSVVRGPPGKPGLPGNKGKEGLPG--DDGVPGQPGPPGPP 56
>SB_39426| Best HMM Match : C4 (HMM E-Value=0)
Length = 188
Score = 58.0 bits (134), Expect = 7e-09
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +3
Query: 465 WNITALGRLFVNSYNANGKAHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDFAQREDYSFW 644
W+ G F+ A G GQ LG+ GSCL F P++ C+ C + + YSFW
Sbjct: 53 WSSLWSGYSFLMHTGAGGSGTGQSLGSSGSCLESFRPNPFIECHGRGTCHYYANK-YSFW 111
Query: 645 LSTPE-PMPMAMT-PIQARDVGTYISRCQVC 731
L+T P + ++A ++ + +SRCQVC
Sbjct: 112 LATVNTPFQTQQSETLKAGNLLSRVSRCQVC 142
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 403 KSRGFYFTVHSQTRLIPKCPSGTSPLWEGFSLI 501
+S G VHSQ+ +P CP G S LW G+S +
Sbjct: 31 ESHGPVMAVHSQSTTLPTCPGGWSSLWSGYSFL 63
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +3
Query: 639 FWLSTPEPMPMAMTPIQARDVGTYISRCQVC 731
+WLST +PM PIQA V YISRC VC
Sbjct: 2 YWLSTDNQVPMM--PIQASAVEPYISRCTVC 30
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P TP P P PG P+TPS PS PG P++P P S S S P +PS+P P P
Sbjct: 500 PSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPSTPST 559
Query: 72 PA 67
P+
Sbjct: 560 PS 561
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P TPR P P P P+TPS PS P P++P P S S S P +PS PC P P
Sbjct: 27 PSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPST 86
Query: 72 PA 67
P+
Sbjct: 87 PS 88
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGP 79
P TP P P P P+TPS PS P P++P P S S S P +PS PC P P
Sbjct: 279 PSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTP 336
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGP 79
P TP P P P P+TPS PS P P++P P S S S P +PS PC P P
Sbjct: 829 PSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTP 886
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P TP P P P +TPS PS P P++PG PG S S S P +PS P P P
Sbjct: 479 PSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPST 538
Query: 72 PA 67
P+
Sbjct: 539 PS 540
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P TP P P P +P+TPS PS P P++P P S S S P +PS P P P
Sbjct: 273 PCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCT 332
Query: 72 P 70
P
Sbjct: 333 P 333
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P TP P P P +P+TPS PS P P++P P S S S P +PS P P P
Sbjct: 823 PCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCT 882
Query: 72 P 70
P
Sbjct: 883 P 883
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/65 (43%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 258 SLCPLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
S P TP P P PG P TPS PS P P +P P S S S P +PS P P
Sbjct: 494 SSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPST 553
Query: 81 PMNPA 67
P P+
Sbjct: 554 PSTPS 558
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P P P P+T S PS P P++P PG + G+ +P +PS P P P P
Sbjct: 476 PSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPG--TPGTPSTPSTPSAPGTPSTPSTP 533
Query: 69 A 67
+
Sbjct: 534 S 534
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/61 (40%), Positives = 30/61 (49%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P P P TPS PS P P++P P S S +P +PS PC P P P
Sbjct: 225 PSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPS--TPSTPSTPCTPNTPSTP 282
Query: 69 A 67
+
Sbjct: 283 S 283
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/61 (40%), Positives = 30/61 (49%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P P P TPS PS P P++P P S S +P +PS PC P P P
Sbjct: 775 PSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPS--TPSTPSTPCTPNTPSTP 832
Query: 69 A 67
+
Sbjct: 833 S 833
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P P P P+TPS PS P P++P PG +P +PS P PG P+ P
Sbjct: 132 PSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPG--------TPSTPSTPSAPGTPITP 183
Query: 69 A 67
+
Sbjct: 184 S 184
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRV-SPLSPSIPCRPGGPMN 73
P TP P P P P+TPS PS P P +PG P S S +P++PS P P
Sbjct: 135 PSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPST 194
Query: 72 PA 67
P+
Sbjct: 195 PS 196
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P P P +P TPS PS P P++P PG +P +PS P PG P+ P
Sbjct: 682 PSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITPG--------TPSTPSTPSAPGTPITP 733
Query: 69 A 67
+
Sbjct: 734 S 734
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -2
Query: 249 PLTPR*PFRP---KDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P+TPR P P PG P+TPS PS P P++P S S S P +PS P P
Sbjct: 416 PITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPST 475
Query: 81 PMNPA 67
P P+
Sbjct: 476 PSTPS 480
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TPR P P P P+TPS PS P P +P P + + +P +PS P P P P
Sbjct: 392 PSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTP--CTHSTPGTPSTPSTPSTPSTPSTP 449
Query: 69 A 67
+
Sbjct: 450 S 450
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 255 LCPLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRV-SPLSPSIPCRPGGP 79
LC T P P P +TPS PS P P++P P S S +P +PS P P P
Sbjct: 632 LCTCTLSTPSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTP 691
Query: 78 MNPA 67
P+
Sbjct: 692 STPS 695
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 255 LCPLTPR*PFRPKDPGIPATP---SRPSNPGNPTSPGCPGKISDGSRVSPLS-PSIPCRP 88
+ P TP P P PG P TP S PS P P++ P S S S LS PS P P
Sbjct: 163 ITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMP 222
Query: 87 GGPMNPA 67
P P+
Sbjct: 223 NTPSTPS 229
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 255 LCPLTPR*PFRPKDPGIPATP---SRPSNPGNPTSPGCPGKISDGSRVSPLS-PSIPCRP 88
+ P TP P P PG P TP S PS P P++ P S S S LS PS P P
Sbjct: 713 ITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMP 772
Query: 87 GGPMNPA 67
P P+
Sbjct: 773 NTPSTPS 779
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P+TP P P P P TP PS P++P P S S S P +PS P P
Sbjct: 162 PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSM 221
Query: 72 P 70
P
Sbjct: 222 P 222
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P+TP P P P P TP PS P++P P S S S P +PS P P
Sbjct: 712 PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSM 771
Query: 72 P 70
P
Sbjct: 772 P 772
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
+G +GPPG G GD+G T +P + G GD+G PG DG G G PG G G+ G +
Sbjct: 1030 SGPVGPPGPPGSPGDRGQTGVPGPV--GPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYR 1087
Query: 248 G 250
G
Sbjct: 1088 G 1088
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/60 (43%), Positives = 29/60 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G IG PG G+ G KG P PG PG G G G G+AG PG G G +G G
Sbjct: 1058 GDIGAPGADGVPGPKGP---PGP--PGYPGFKGYRGPQGPPGIAGEPGPPGIGGGIGYMG 1112
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 195 PSRPSNPGNPTSPGCPGKIS-DGSRVSPLSPSIPCRPGGPMNP 70
P P +PG+ G PG + DG +P + +P P GP P
Sbjct: 1036 PGPPGSPGDRGQTGVPGPVGPDGDIGAPGADGVP-GPKGPPGP 1077
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GP G G G +G+ LP + G G VG PG G DG G PGS G G +G+ G
Sbjct: 99 GLPGPRGSDGPRGQRGEVGLPGE--SGSAGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTG 156
Query: 251 Q 253
Q
Sbjct: 157 Q 157
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/59 (42%), Positives = 30/59 (50%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPG G G G + PG+ G+ G+PG DGR G G G GR G G G+R
Sbjct: 672 GPPGPSGPSGSNGRNGVKGT--PGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGER 728
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/63 (42%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G GP GL G G GD +D PG+PG G G G G+PG+ GR G G K
Sbjct: 483 GETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASGRRGAPGAK 542
Query: 248 GQR 256
G R
Sbjct: 543 GSR 545
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/62 (41%), Positives = 30/62 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G +GPPG+ G +G G SD L G PG G G G G G G G+NG G
Sbjct: 547 ERGRVGPPGIDGKDGAPG-----SDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGA 601
Query: 245 KG 250
G
Sbjct: 602 SG 603
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/62 (40%), Positives = 31/62 (50%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPG QG G+KG+ GQPG G G +G G +G G G G G+KG
Sbjct: 567 GLNGPPGPQGPAGEKGEA--------GQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKG 618
Query: 251 QR 256
+
Sbjct: 619 AK 620
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/62 (40%), Positives = 32/62 (51%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPGLQG+ G G+ + G PG+ GL G G G G PG+ G G G +G
Sbjct: 162 GPTGPPGLQGVRGAPGN-----EGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQG 216
Query: 251 QR 256
+
Sbjct: 217 SK 218
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
G PG QG+ G G P PG PG G G +GR+GV G PG G G G G+
Sbjct: 648 GTPGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIPGPDGR 706
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP----GQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
GF G PG G G +G L P G PG G+ G G +G G+PG+ G G
Sbjct: 135 GFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKR 194
Query: 239 GVKGQR 256
G G R
Sbjct: 195 GATGSR 200
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDV-GLPGFDGRDGVAGIPGSFGRNGYLG 241
EAG G G G GD+G + + P PG + G G G G GI G+ G+ G LG
Sbjct: 583 EAGQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLG 642
Query: 242 VKG 250
KG
Sbjct: 643 SKG 645
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/62 (40%), Positives = 31/62 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+AG G PG G+ GDKG + PG G G+ G G G+ G PG+ G NG G
Sbjct: 220 QAGIDGRPGEPGLPGDKG-----AMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGP 274
Query: 245 KG 250
G
Sbjct: 275 NG 276
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-------LPGQPGDVGLPGFDGRDGVAGIPGSFGRN 229
G GP G G G G P + PG PG G+PG GR G G GS G
Sbjct: 489 GLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGASGRRGAPGAKGSRGER 548
Query: 230 GYLGVKG 250
G +G G
Sbjct: 549 GRVGPPG 555
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLP-SDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG QG+ G G P + G+ G VG PG DG+DG PGS G NG G +G
Sbjct: 522 GTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGA---PGSDGLNGPPGPQG 576
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP----GQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G G PGL+G G G P + P G G G G DGR G G+PG G G
Sbjct: 183 GLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGP 242
Query: 239 GVKGQ 253
G GQ
Sbjct: 243 GPAGQ 247
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILP-------GQPGDVGLPGFDGRDGVAGIPGSFG 223
E+G G G+ G+ G G+ P + P G PG G PG G+ G +G G G
Sbjct: 409 ESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERG 468
Query: 224 RNGYLGVKGQR 256
+G G G+R
Sbjct: 469 TDGKPGAMGER 479
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
G PG+ G +G G+ +I G+ G G G+ G+DG AG PG+ G G G G+
Sbjct: 696 GEPGIPGPDGRPGERGPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGPTGQPGE 754
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+ G +G PG G G G P D PG PG G G G G G G G G G
Sbjct: 112 QRGEVGLPGESGSAGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQG 171
Query: 242 VKGQREK*DYKVLLENQALKGYKVSKVNEG 331
V+G + L N LKG + + + G
Sbjct: 172 VRGAPGNEGARGLPGNPGLKGKRGATGSRG 201
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
+ G GP G GI G+ G T + D P G PG G PG G+ G G G G G
Sbjct: 247 QPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIG 303
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/62 (38%), Positives = 27/62 (43%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G +GP G QG G +G PG PG G G G G G PG+ G G G
Sbjct: 433 ERGPVGPQGPQGAPGTQGP--------PGLPGKTGESGPRGERGTDGKPGAMGERGPQGE 484
Query: 245 KG 250
G
Sbjct: 485 TG 486
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPS----DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
+G G PG +G G++G P D PG G G PG G G G G G NG+
Sbjct: 533 SGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGF 592
Query: 236 LGVKGQR 256
G G +
Sbjct: 593 NGKNGDQ 599
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGS 217
G G PG GI GD+G P PG PG G G G G G PGS
Sbjct: 258 GITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKIGRVGPMGPIGDPGS 307
Score = 35.1 bits (77), Expect = 0.059
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIP---GSFGRNGYLGVKG 250
G PG+ G G G +PG G+ G PG G+ G G P G G NG GV+G
Sbjct: 786 GKPGINGTNGRGG--------IPGLKGERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQG 837
Query: 251 QR 256
+
Sbjct: 838 AK 839
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPG 214
E G G G +G +G G+ P D G+PG VGL G G+ G G+PG
Sbjct: 709 ERGPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPG 759
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG G +G G+ G+PG +G G G G+ G PG G G G G
Sbjct: 16 GPPGDIGDQGPSGEA--------GKPGPLGYNGQPGNQGMRGDPGPQGDQGPQGPPG 64
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGF---DGRDGVAGIPGSFGRNGY 235
+ G +G PG G G +G + P + G PG G+ G +G G G PG G+ G
Sbjct: 235 DKGAMGGPGPAGQPGIRGPSGAPG--ITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGK 292
Query: 236 LGVKG 250
+G G
Sbjct: 293 IGRVG 297
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/66 (40%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDV-----GLPGFDGRDGVAGIPGSFGRNG 232
G+ G PG QG+ GD G D P G PG G+ G D D AGI GS G G
Sbjct: 37 GYNGQPGNQGMRGDPGP---QGDQGPQGPPGGSTQTAGGIKGPDPNDLAAGIKGSNGAPG 93
Query: 233 YLGVKG 250
G G
Sbjct: 94 PRGSPG 99
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G GP G KG P PG PG G G G+ G G+PG G G +G
Sbjct: 72 GIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGMVGRP 131
Query: 248 GQ 253
G+
Sbjct: 132 GR 133
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/60 (38%), Positives = 26/60 (43%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G PG+QG +G +GD D G G G G G G G G G G GV G
Sbjct: 828 GANGEPGVQGAKGARGDD--GKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGVAG 885
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 210 GIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIP 97
G P P PG P SPG GK+ + P P+ P
Sbjct: 129 GRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGP 166
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
GP G G +G+KG + PG+ G G PG G G G PG G G
Sbjct: 711 GPGGEIGRKGEKGPS--GERGYPGKDGRAGEPGAVGLRGPTGQPGENGLPG 759
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G PG+ G G +G G G G PG G G++G PG G G G G
Sbjct: 624 GSSGRPGITGTLGQRGRL--------GSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPPG 675
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 167 GLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK 262
G PG +G +G GIPG G G G G+ K
Sbjct: 786 GKPGINGTNGRGGIPGLKGERGSPGEPGKAGK 817
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P + G RP PG +PG PG +V + P P GP
Sbjct: 119 PGESGSAGMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGP 166
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -2
Query: 219 KDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
+ PG P P G +PG G + RV P P I + G P
Sbjct: 519 RKPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGP--PGIDGKDGAP 563
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
+ G GP G +G +G G + +D PG G+VG G G G+ G PG G
Sbjct: 865 DKGNRGPRGEKGEQGPPG--VAGTDGPPGPRGNVGPMGPMGDPGLPGPPGPPG 915
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKI-SDGSRVSPLSPSIPCRPGGP 79
PG+ P RP PG P PG G S+G +P PG P
Sbjct: 656 PGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIP 701
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGN---PTSPGCPGKI-SDGSRVSPLSPSIPCRPGGP 79
PR P P PG+ P N G P +PG GK + GSR SP + P P GP
Sbjct: 160 PRGPTGP--PGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQG-PQGPSGP 214
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKIS-DGSRVSPLSPSIPCRPGGPMNP 70
P G+P P PG P PG PG GS P R G P P
Sbjct: 650 PGSQGMPGMSGPPGRPGPPGPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIP 701
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -2
Query: 210 GIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
G+ P RP G P +PG PG P P P G
Sbjct: 126 GMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPG 168
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGK 142
P +PG T +P PG PG G+
Sbjct: 509 PGEPGAQGTKRKPGTPGRQGMPGASGR 535
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 210 GIPATPSRPSNPGNPTSPGCPGKISDGSRV 121
G+ TP R PG P G PG+ G +
Sbjct: 687 GVKGTPGRDGEPGIPGPDGRPGERGPGGEI 716
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P P P P DP P+ P+ PS+P PT P P SD + S P P+ P P GP +
Sbjct: 61 PTAPSDPTVPSDPTAPSDPTAPSDPTGPTGPSDPTLSSDPTGPSDPTGPTAPSDPTGPSD 120
Query: 72 P 70
P
Sbjct: 121 P 121
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP P PS P+ P +PT P P SD + P P+ P P GP +P
Sbjct: 184 PTAPSDPTGPSDPTAPTGPSDPTGPSDPTGPSDPTGPSDPT--GPSDPTAPSDPTGPSDP 241
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P P P P DP P+ P+ P+ P +PT P P SD + S P PS P P P
Sbjct: 133 PTAPSDPTAPSDPTGPSDPTAPTGPSDPTGPSDPTVSSDPTGPSDPTGPSDPTAPSDPTG 192
Query: 72 PA 67
P+
Sbjct: 193 PS 194
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P P P P DP +P+ P+ PS+P P+ P P SD + S P PS P P P +
Sbjct: 55 PTAPSDPTAPSDPTVPSDPTAPSDPTAPSDPTGPTGPSDPTLSSDPTGPSDPTGPTAPSD 114
Query: 72 P 70
P
Sbjct: 115 P 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP +P+ P+ PS+P P+ P P SD + P P++P P GP +P
Sbjct: 241 PTAPSDPTAPSDPTVPSDPTGPSDPTAPSDPTAP---SDPT--GPSDPTVPSDPTGPSDP 295
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP P+ P+ PS+P PT P P SD + P P+ P P GP +P
Sbjct: 172 PTGPSDPTGPSDPTAPSDPTGPSDPTAPTGPSDPTGPSDPT--GPSDPTGPSDPTGPSDP 229
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP +P+ P+ PS+P P+ P P SD + +P P++P P G +P
Sbjct: 343 PTAPSDPTAPSDPTVPSDPTGPSDPTGPSDPTAP---SDPT--APSDPTVPSDPTGQSDP 397
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P DP P PS P+ P +PT P P SD + +P P+ P P GP +P
Sbjct: 100 PTGPSDPTGPTAPSDPTGPSDPTVPSDPTGQSDPT--APSDPTAPSDPTGPSDP 151
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP P+ P+ PS+P P+ P P SD + +P P++P P GP +P
Sbjct: 211 PTGPSDPTGPSDPTGPSDPTAPSDPTGPSDPTAP---SDPT--APSDPTVPSDPTGPSDP 265
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNP---GNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P P P P DP +P+ P+ PS+P +PT+P P SD + S P +PS P P
Sbjct: 13 PTGPSDPTVPSDPTVPSDPTAPSDPTVSSDPTAPSDPTGPSDPTAPSDPTAPSDPTVPSD 72
Query: 81 PMNPA 67
P P+
Sbjct: 73 PTAPS 77
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSN---PGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P P P P DP + + P+ PS+ P +PT+P P SD + S P +PS P P
Sbjct: 25 PTVPSDPTAPSDPTVSSDPTAPSDPTGPSDPTAPSDPTAPSDPTVPSDPTAPSDPTAPSD 84
Query: 81 PMNP 70
P P
Sbjct: 85 PTGP 88
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP +P+ P+ S+P P+ P P + S P +P+ P P GP +P
Sbjct: 109 PTAPSDPTGPSDPTVPSDPTGQSDPTAPSDPTAPSDPTGPS--DPTAPTGPSDPTGPSDP 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P DP P+ P+ PS+P P+ P P SD + P P++ P GP +P
Sbjct: 121 PTVPSDPTGQSDPTAPSDPTAPSDPTGPSDPTAPTGPSDPT--GPSDPTVSSDPTGPSDP 178
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P P P DP P+ P+ P+ P +PT P P SD + S P +PS P P P
Sbjct: 88 PTGPSDPTLSSDPTGPSDPTGPTAPSDPTGPSDPTVPSDPTGQSDPTAPSDPTAPSDPTG 147
Query: 72 PA 67
P+
Sbjct: 148 PS 149
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSN---PGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P P P P DP +P+ P+ PS+ P +PT P P SD + S P PS P P
Sbjct: 499 PTAPSDPTGPNDPTVPSDPTGPSDPTAPSDPTGPSDPTAPSDPTVSSDPTGPSDPTAPSD 558
Query: 81 P 79
P
Sbjct: 559 P 559
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSN---PGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P P P P DP P+ P+ PS+ P +PT+P P SD + S P PS P P
Sbjct: 319 PTAPSDPTGPSDPTGPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGPSDPTGPSDPTAPSD 378
Query: 81 PMNPA 67
P P+
Sbjct: 379 PTAPS 383
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP +P+ P+ PS+P P P G+ R P S P P P P
Sbjct: 271 PTAPSDPTGPSDPTVPSDPTGPSDPTGPIDP--TGQSDPTGRSDPTVHSDPTAPSDPTGP 328
Query: 69 A 67
+
Sbjct: 329 S 329
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP P+ P+ PS+P P+ P P SD + +P P++P P G +P
Sbjct: 421 PTGPSDPTGPSDPTAPSDPTVPSDPTGPSDPTAP---SDPT--APSDPTVPSDPTGQSDP 475
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGS-RVSPLSPSIPCRPGGPMN 73
P P P P DP P P+ PS+P P+ P P + S +P P++ P GP +
Sbjct: 493 PTGPSDPTAPSDPTGPNDPTVPSDPTGPSDPTAPSDPTGPSDPTAPSDPTVSSDPTGPSD 552
Query: 72 P 70
P
Sbjct: 553 P 553
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATP---SRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P P P P DP +P+ P S P+ P +PT P SD + S P PS P P
Sbjct: 373 PTAPSDPTAPSDPTVPSDPTGQSDPTGPSDPTVHSDPTAPSDPTGQSDPTGPSDPTGPSD 432
Query: 81 PMNPA 67
P P+
Sbjct: 433 PTAPS 437
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMNPA 67
P P P DP +P+ P+ PS +PT+P P SD + S P PS P P P P+
Sbjct: 10 PSDPTGPSDPTVPSDPTVPS---DPTAPSDPTVSSDPTAPSDPTGPSDPTAPSDPTAPS 65
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNP---GNPTSPGCPGKISDGSRVS-PLSPSIPCRPGG 82
P P P P DP P+ P+ PS+P +PT P P SD + S P S P P
Sbjct: 367 PTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGPSDPTVHSDPTAPSDPTGQSDPTGPSD 426
Query: 81 PMNPA 67
P P+
Sbjct: 427 PTGPS 431
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P DP P+ P+ PS+P P P P SD + P P+ P P GP +P
Sbjct: 487 PTAPSDPTGPSDPTAPSDPTGPNDPTVP---SDPT--GPSDPTAPSDPTGPSDP 535
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 216 DPGIPATPSRPSNPGNPTSPGCPG-KISDGSRVSPLSPSIPCRPGGPMNP 70
DP P+ P+ PS+P P+ P P + +P P++P P GP +P
Sbjct: 318 DPTAPSDPTGPSDPTGPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGPSDP 367
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P DP P+ P+ PS+P P+ P P + S P +PS P P P P
Sbjct: 409 PTAPSDPTGQSDPTGPSDPTGPSDPTAPSDPTVPSDPTGPS--DPTAPSDPTAPSDPTVP 466
Query: 69 A 67
+
Sbjct: 467 S 467
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCP----------GKISDGSRVSPLSPSI 100
P P P P DP +P+ P+ PS+P P+ P P G+ R P S
Sbjct: 427 PTGPSDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGRSDPTVHSD 486
Query: 99 PCRPGGPMNPA 67
P P P P+
Sbjct: 487 PTAPSDPTGPS 497
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P DP + + P+ PS+P P+ P P SD + P P++P P GP +P
Sbjct: 475 PTGRSDPTVHSDPTAPSDPTGPSDPTAP---SDPT--GPNDPTVPSDPTGPSDP 523
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGL---PGFDGRDGVAGIPGSFGRNGYLG 241
G G PG G+ G KGD +P PG PG GL PG G G G PG+ GR+G G
Sbjct: 376 GRAGAPGSPGLGGQKGDQGMPGK--PGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPG 433
Query: 242 VKGQR 256
+G+R
Sbjct: 434 AQGER 438
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/65 (43%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILP----GQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
AG G PG QG GD GD P + P G G G PG G+ G G PG GR G
Sbjct: 141 AGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGDAGRAGP 200
Query: 236 LGVKG 250
G +G
Sbjct: 201 QGPQG 205
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GP G +G G +G +P PG GD G G G DG+ G G+ G G G+
Sbjct: 218 ERGGKGPQGSRGPVGPRGANGVPGS--PGADGDTGEAGEHGADGLKGDRGADGLPGEDGI 275
Query: 245 KGQR 256
G R
Sbjct: 276 PGPR 279
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLP------GFDGRDGVAGIPGSFGRNG 232
G GPPGL G G+ G T P G PGDVG P G +G +G AG PG G+ G
Sbjct: 133 GAKGPPGLAGEPGEPG-TQGPR----GDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPG 187
Query: 233 YLGVKG 250
+G G
Sbjct: 188 AIGSPG 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/60 (43%), Positives = 30/60 (50%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G IGPPG G + +P LPG+ GD G PG G G+AG PG G G G G
Sbjct: 101 GLIGPPGPPGKPVIRR-VGIPG--LPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPG 157
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/59 (40%), Positives = 27/59 (45%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
+G PGL G GD+G P G PG G PG G G G PG G G G G+
Sbjct: 117 VGIPGLPGKRGDRGT---PG--AKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGR 170
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDI-------LPGQPGDV---GLPGFDGRDGVAGIPGS 217
AG G PGL G +GD+G P + PG GD G PG GRDG G G
Sbjct: 378 AGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQGE 437
Query: 218 FGRNGYLGVKGQR 256
G G G +G++
Sbjct: 438 RGPRGEQGKQGEK 450
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG G PG +G G++G+ PG PG G PG G G G G G G+ G
Sbjct: 405 AGLRGAPGARGDYGERGE--------PGAPGRDGAPGAQGERGPRGEQGKQGEKGHAGEG 456
Query: 248 G 250
G
Sbjct: 457 G 457
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
I P G G G G L GQ GD G+PG G G AG+ G+ G G G +G+
Sbjct: 372 IPPQGRAGAPGSPG--------LGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGE 422
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G G PG G G +G+ + G+ G+ G G G DG GIPG G G +G
Sbjct: 419 ERGEPGAPGRDGAPGAQGERGPRGE--QGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGA 476
Query: 245 KG 250
G
Sbjct: 477 PG 478
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLP-SDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G QG +G+KG +D PG PG+ G G G G G GS G G G KG
Sbjct: 439 GPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAPGPVGNAGSPGSPGPSGPKG 496
Score = 35.1 bits (77), Expect = 0.059
Identities = 25/62 (40%), Positives = 25/62 (40%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
EAG G G G G G P I G PGD G G G G G G G G G
Sbjct: 164 EAGPSGRNGANGTAGPPGVRGQPGAI--GSPGDAGRAGPQGPQGAEGRTGRRGSLGERGG 221
Query: 245 KG 250
KG
Sbjct: 222 KG 223
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 128 LPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
+P G PG GL G G G+ G PG+ G G G G R
Sbjct: 372 IPPQGRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGAR 414
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/64 (43%), Positives = 33/64 (51%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
EAG GP G G++G G + D PG G G PG G G GIPG G+NG +G
Sbjct: 734 EAGPDGPAGPAGLDGKNG--INGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGKNGKMGP 791
Query: 245 KGQR 256
G R
Sbjct: 792 TGPR 795
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQP-GDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G GP G G EG+ G P P P G G PG G DG AG PG+ G G LG
Sbjct: 817 GVSGPKGEMGPEGEAGQPGPPGPPGPNGPVGQTGQPGTPGPDGAAGEPGARGPRGKLG 874
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G G G+ G KG+ + + GQPG G PG +G G G PG+ G +G G G R
Sbjct: 811 GEAGANGVSGPKGE--MGPEGEAGQPGPPGPPGPNGPVGQTGQPGTPGPDGAAGEPGAR 867
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G G PG QG+ G +G T PG GD G PG G +G G G+ G G G
Sbjct: 356 GSSGVPGAQGMPGPRGSTGEAGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPTGRV 415
Query: 248 G 250
G
Sbjct: 416 G 416
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/63 (41%), Positives = 28/63 (44%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
EAG GPPG G D+G PG PG G G G G G G G +G G
Sbjct: 375 EAGRQGPPGANG---DRGQ--------PGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTGP 423
Query: 245 KGQ 253
KGQ
Sbjct: 424 KGQ 426
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKG-DTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GP G +GI G+ G D L G+ G G G G DG G PG G G G+ G +
Sbjct: 724 GPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQ 783
Query: 257 EK 262
K
Sbjct: 784 GK 785
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +2
Query: 98 GIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GI G +G+T SD G PG+ GL G G G G PG G G G G
Sbjct: 688 GITGPQGET--GSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEAG 736
Score = 35.5 bits (78), Expect = 0.045
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G PG G++G G L PG G G+ G G DG AG G G+NG G G
Sbjct: 700 GAQGAPGEGGLQGPIG--LQGQRGPPGPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDG 757
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G G+ G G G L G PG G G G GV+G G+ G G+ G +G
Sbjct: 526 GANGQRGVTGPSGSPGPGGLQG--AAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRG 583
Query: 251 QR 256
+R
Sbjct: 584 KR 585
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/64 (35%), Positives = 29/64 (45%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G GP G G G +G +P G GD G PG G +G G+ G G G
Sbjct: 530 QRGVTGPSGSPGPGGLQGAAGMPGPA--GPKGDRGSPGVSG---ASGAKGAKGHEGGRGK 584
Query: 245 KGQR 256
+GQR
Sbjct: 585 RGQR 588
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDG 196
G PGL G G++G D PG G VG PG G DG
Sbjct: 129 GAPGLDGENGEQGQKGSSGD--PGSEGPVGPPGKPGMDG 165
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILP----GQPGDVGLPGFDGRDGVA---GIPGSFGRNGYL 238
G G QG+ G G ++ +P G PG G+PG G G A G PG+ G G
Sbjct: 332 GARGTQGVAGAAGQIVVCKSRIPQGSSGVPGAQGMPGPRGSTGEAGRQGPPGANGDRGQP 391
Query: 239 GVKG 250
G G
Sbjct: 392 GAPG 395
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 158 GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G G G G DG G PG G G +G++GQR
Sbjct: 688 GITGPQGETGSDGAQGAPGEGGLQGPIGLQGQR 720
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG G PG DG +G G GS G G G G
Sbjct: 123 GPPGQNGAPGLDGENGEQGQKGSSGDPGSEGPVG 156
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 158 GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G +G PG G G G PG G NG G KG
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDGENGEQGQKG 144
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G +GPPG +G G G PG G G G+ G +G PGS G G G G
Sbjct: 114 GRLGPPGRRGPPGQNG-----------APGLDGENGEQGQKGSSGDPGSEGPVGPPGKPG 162
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G G PG+ G G KG+ L+ L G PG G PG GR+G AG PG G G G +
Sbjct: 3447 GVKGEPGVPGFPGLKGEIGLIGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPGER 3506
Query: 248 G 250
G
Sbjct: 3507 G 3507
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+AG +GP G+ GI+G +G +PG+PG G G G G G G+ G G LG
Sbjct: 3517 DAGPVGPRGINGIQGSQG--------VPGEPGPAG-NGEKGAIGPIGPAGTKGNKGELGS 3567
Query: 245 KGQREK*DYK-VLLENQALKGYK 310
KG++ YK E ALK Y+
Sbjct: 3568 KGEKYNYHYKDTEQERLALKSYQ 3590
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/64 (45%), Positives = 36/64 (56%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GPPGL+GI+GDK G PG VG PG G+ G+ G PG G+ G G
Sbjct: 3317 EQGPQGPPGLKGIKGDK-----------GFPGMVGFPGLRGKTGLPGKPGK-GKPGPTGP 3364
Query: 245 KGQR 256
KG++
Sbjct: 3365 KGEQ 3368
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G IG PG+ G +G+KG P LPGQ G GL G +G+ G G PG G+ G GV
Sbjct: 3728 GPIGQPGMAGSQGEKGGKGDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEKGVP 3787
Query: 248 GQ 253
G+
Sbjct: 3788 GR 3789
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/72 (41%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI----------LPGQPGDVGLPGFDGRDGVAGIPG 214
E G IGPPGL G G G +P L G PG+ GL G DG G AG G
Sbjct: 3463 EIGLIGPPGLAGSPGQTGAPGIPGRNGTAGPPGFPGLKGSPGERGLSGIDGPPGDAGPVG 3522
Query: 215 SFGRNGYLGVKG 250
G NG G +G
Sbjct: 3523 PRGINGIQGSQG 3534
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILP------GQPGDVGLPGFDGRDGVAGIPGSFGRN 229
AG +G G G++G+KG+ +++ P G+PG G PG G G+ G PG G
Sbjct: 3417 AGPVGTRGFPGLKGEKGEPAESTNVNPFTKGVKGEPGVPGFPGLKGEIGLIGPPGLAGSP 3476
Query: 230 GYLGVKG 250
G G G
Sbjct: 3477 GQTGAPG 3483
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G GPPG G++G G+ L D PG G VG G +G G G+PG G G G K
Sbjct: 3489 GTAGPPGFPGLKGSPGERGLSGIDGPPGDAGPVGPRGINGIQGSQGVPGEPGPAGN-GEK 3547
Query: 248 G 250
G
Sbjct: 3548 G 3548
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP----GQPGDVGLPGFDGRD------GVAGIPGSF 220
G G PGL G G G T P D G+ GDVG G G G+ G G+
Sbjct: 3602 GESGTPGLDGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGDVGPVGIRGFKGNK 3661
Query: 221 GRNGYLGVKGQREK*DYKVLLENQALKGYKVSKVNEGLK 337
G G +G G E+ D + LL + KG + N G K
Sbjct: 3662 GMKGEVGPPGPPERIDNQTLLAAKGDKGERGFPGNNGGK 3700
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G G PG QG G +G P PG G G G G G G+PG G G G
Sbjct: 3711 EKGNTGAPGSQGSTGPRG----PIG-QPGMAGSQGEKGGKGDPGFPGLPGQAGLRGLQGP 3765
Query: 245 KGQR 256
+GQ+
Sbjct: 3766 EGQK 3769
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLP-SDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G G QG G+KG+T P S G G +G PG G G G G G G G G R
Sbjct: 3701 GERGAQGPRGEKGNTGAPGSQGSTGPRGPIGQPGMAGSQGEKGGKGDPGFPGLPGQAGLR 3760
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
G PG+ G G +G T LP G+PG G G GR ++G PG G G
Sbjct: 3334 GFPGMVGFPGLRGKTGLPGKPGKGKPGPTGPKGEQGR-SISGPPGPPGAPG 3383
Score = 35.5 bits (78), Expect = 0.045
Identities = 29/69 (42%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDIL--PGQPGD----VGLPGFDGRDGVAG-IPGSFG 223
+ G IG PG+ G G+KG PS I PG PG G PG G G A IPG G
Sbjct: 3768 QKGSIGAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKNISGPPGPQGPPGQASQIPGPPG 3827
Query: 224 RNGYLGVKG 250
G G G
Sbjct: 3828 PQGPPGPPG 3836
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVG---LPGFDGRDGVAGIPGSFGRNG 232
+ G +GP G++G +G+KG + ++ PG P + L G G G PG+ G G
Sbjct: 3645 DKGDVGPVGIRGFKGNKG---MKGEVGPPGPPERIDNQTLLAAKGDKGERGFPGNNGGKG 3701
Query: 233 YLGVKGQR 256
G +G R
Sbjct: 3702 ERGAQGPR 3709
Score = 33.5 bits (73), Expect = 0.18
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +2
Query: 104 EGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK*DYKVLL 283
+G+ G T + + G PG G PG DG G G PGS G G G G K +
Sbjct: 3592 KGETGTTGVKGE--SGTPGLDGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGDV 3649
Query: 284 ENQALKGYKVSKVNEG 331
++G+K +K +G
Sbjct: 3650 GPVGIRGFKGNKGMKG 3665
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 140 ILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
+L G+ G G PG G G G PG G G G G
Sbjct: 3313 VLKGEQGPQGPPGLKGIKGDKGFPGMVGFPGLRGKTG 3349
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGV 199
GPPG QG G P PG G G PG GRD V
Sbjct: 3808 GPPGPQGPPGQASQIPGP----PGPQGPPGPPGPPGRDVV 3843
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P P P G+ G+ +PG PGKI G + P PS P GP
Sbjct: 3748 PGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKI--GEKGVPGRPSTIAGPPGP 3799
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 68 AGFIGPPGL-QGIEGDKGDTLLPSDI--LPGQPGDVGLPGFDGRDG 196
AG GPPG + I G G P +PG PG G PG G G
Sbjct: 3794 AGPPGPPGRSKNISGPPGPQGPPGQASQIPGPPGPQGPPGPPGPPG 3839
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/62 (43%), Positives = 33/62 (53%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPG +G GD G SD +PG+ GD G+ G G G G PG G G G +G
Sbjct: 224 GLPGPPGRRGKRGDPG-----SDGIPGERGDRGILGVQGEPGKDGSPGLKGTRGTRGKRG 278
Query: 251 QR 256
+R
Sbjct: 279 ER 280
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDT--LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+G GP G QG++G G+T L P+ + G+ G GLPG G G G+PG G G G
Sbjct: 1107 SGVRGPTGEQGVQGQSGETGGLGPTGPV-GEQGSYGLPGKPGSPGTKGLPGPKGGPGPGG 1165
Query: 242 VKG 250
+G
Sbjct: 1166 TRG 1168
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Frame = +2
Query: 65 EAGFIGPPGL---QGIEGDKGDTLLPSDI----------LPGQPGDVGLPGFDGRDGV-- 199
+AG GP G +G++GD+G+ LP + PG G G+ G +GR GV
Sbjct: 33 KAGMSGPKGYSGEKGMQGDRGENGLPGKLGHQGKRGRRGKPGPEGPAGVQGMEGRQGVQG 92
Query: 200 ----AGIPGSFGRNGYLGVKGQREK*DYKVLLENQALKGYKVSKVNEGLK 337
G PG G G GV+G + + + L N ++G + S+ G+K
Sbjct: 93 KDGEEGPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRGIK 142
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/64 (42%), Positives = 33/64 (51%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G +G PG +G+ G G + LPG PG G G G DG IPG G G LGV+G
Sbjct: 203 GLVGDPGKKGMAGRAGAMGMRG--LPGPPGRRGKRGDPGSDG---IPGERGDRGILGVQG 257
Query: 251 QREK 262
+ K
Sbjct: 258 EPGK 261
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PG +G+ G KG P G+ G+ GL G DG+ G G+ G+ G G G++G+R
Sbjct: 1147 GSPGTKGLPGPKGGPGPGGTRGPVGEAGEDGLHGKDGKPGTQGVSGNDGPIGSPGLQGKR 1206
Query: 257 EK*DY---KVLLE 286
Y +VLLE
Sbjct: 1207 AMSGYPDSRVLLE 1219
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP--GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
G IG PGL GI+G +G P + G+PG VG P G+ G+AG G+ G G G
Sbjct: 173 GVIGNPGLMGIQGSEGP-YGPQGMTGDRGKPGLVGDP---GKKGMAGRAGAMGMRGLPGP 228
Query: 245 KGQREK 262
G+R K
Sbjct: 229 PGRRGK 234
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/66 (40%), Positives = 31/66 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G +GP G G +G G LP PG PG GLPG G G G G G G G+
Sbjct: 1124 ETGGLGPTGPVGEQGSYG---LPGK--PGSPGTKGLPGPKGGPGPGGTRGPVGEAGEDGL 1178
Query: 245 KGQREK 262
G+ K
Sbjct: 1179 HGKDGK 1184
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G G PG++G +G+ G LP + G G G+ G G +G AGIPG G G
Sbjct: 104 GAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRGIKGGRGNEGSAGIPGRAGNKGGR 163
Query: 239 GVKG 250
G +G
Sbjct: 164 GDRG 167
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PG+ G G+PG DG DGV G G G G +G +G
Sbjct: 415 PGRNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEG 449
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G+ G G QG+ G GD G PG GL G G G G+PG+ G +G+
Sbjct: 413 GYPGRNGRQGMPGADGDD--------GVPGSAGLMGVRGPVGPEGLPGAIGPVVCMGITS 464
Query: 251 QR 256
R
Sbjct: 465 YR 466
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PG +GL G G G+ G G G GY G KG +
Sbjct: 14 GNPGPMGLKGRRGPRGMRGKAGMSGPKGYSGEKGMQ 49
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G G G PG +GR G+ G G G G G+ G R
Sbjct: 407 GSRGRTGYPGRNGRQGMPGADGDDGVPGSAGLMGVR 442
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
G GP G G+ G G+ + S G G G G G G G PG G+NG
Sbjct: 489 GASGPTGGMGLIGKPGE--MGSS---GPAGPQGSAGPRGEQGFTGNPGPDGKNG 537
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 210 GIPATPSRPSNPGNPTSPGCPGKISD 133
G+P P R G+P S G PG+ D
Sbjct: 224 GLPGPPGRRGKRGDPGSDGIPGERGD 249
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 71 GFIGPPGLQG---IEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G +GP GL+G ++GDKGDT PG GD G G G G AG+ G G G +
Sbjct: 283 GPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKGEAGVKGDKGDQGVM 342
Query: 239 GVKGQR 256
G KG +
Sbjct: 343 GAKGDQ 348
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G G G G++GDKGDT G G+ G+ G G GV G G G G+ G
Sbjct: 302 DTGANGTAGAPGVKGDKGDT-----GASGAKGEAGVKGDKGDQGVMGAKGDQGIQGFNGT 356
Query: 245 KGQR 256
KG++
Sbjct: 357 KGEK 360
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQRE 259
GP G +G G +G + P L G PG G G G +G AG PG G G G G +
Sbjct: 271 GPQGPRGFNGSEGP-VGPKG-LKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAKG 328
Query: 260 K*DYKVLLENQALKGYK 310
+ K +Q + G K
Sbjct: 329 EAGVKGDKGDQGVMGAK 345
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 48.0 bits (109), Expect = 8e-06
Identities = 28/61 (45%), Positives = 32/61 (52%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
+G G PGLQGI G +G+T SD G PG+ GL G G G G PG G G G
Sbjct: 9 SGLQGGPGLQGITGPQGET--GSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGIAGEA 66
Query: 248 G 250
G
Sbjct: 67 G 67
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GP G++G G +G PG G G G G DG G PG G G +G++GQR
Sbjct: 1 GPRGIKGASGLQGG--------PGLQGITGPQGETGSDGAQGAPGEGGLQGPIGLQGQR 51
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GP G G G KG+ P G G+VG G G +G G PG G G G KGQ
Sbjct: 348 GPQGGAGSRGTKGEAGPPGP--NGPKGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQ 403
Score = 34.3 bits (75), Expect = 0.10
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G G PG G++G G L PG G G+ G G DG AG G G+NG G
Sbjct: 31 GAQGAPGEGGLQGPIG--LQGQRGPPGPKGSRGIAGEAGPDGPAGPAGLDGKNGING 85
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAG 205
G GPPG G +G+ G + ++ G PG G+PG +G G G
Sbjct: 360 GEAGPPGPNGPKGNVGPAGQVGNNGQDGTPGKDGVPGTNGGKGQPG 405
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G+ G PG G+EG +G T I G+ G G G DG +G AG+ G G GY G
Sbjct: 28 GYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSGEKGYRGAP 87
Query: 248 GQR 256
G++
Sbjct: 88 GRQ 90
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/64 (42%), Positives = 32/64 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G+ G PG QG++G +G D PG PG G G G DG G PG G NG G
Sbjct: 80 EKGYRGAPGRQGLQGKRGPE---GD--PGSPGGSGEAGDKGVDGPPGSPGPQGFNGARGP 134
Query: 245 KGQR 256
G +
Sbjct: 135 NGPK 138
Score = 45.2 bits (102), Expect = 6e-05
Identities = 31/91 (34%), Positives = 42/91 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G G PG G +G+KG G PG +GL G GR G G G GR+G G
Sbjct: 11 EPGRDGTPGAIGPQGNKG--------YAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGA 62
Query: 245 KGQREK*DYKVLLENQALKGYKVSKVNEGLK 337
G+ L+ + KGY+ + +GL+
Sbjct: 63 AGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQ 93
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/56 (42%), Positives = 28/56 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
+ G GPPG G +G G P+ G GD G PG DGR G G PG+ G G
Sbjct: 113 DKGVDGPPGSPGPQGFNG-ARGPN----GPKGDSGRPGQDGRQGPPGPPGARGEPG 163
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PG G GDKG P PG G G G +G G +G PG GR G G G R
Sbjct: 103 GSPGGSGEAGDKGVDGPPGS--PGPQGFNGARGPNGPKGDSGRPGQDGRQGPPGPPGAR 159
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 146 PGQPGDVGLPGF---DGRDGVAGIPGSFGRNGYLGVKG 250
PG+PG G PG G G AG PG+ G G G G
Sbjct: 9 PGEPGRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTG 46
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 167 GLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG GRDG G G G GY G G
Sbjct: 7 GDPGEPGRDGTPGAIGPQGNKGYAGNPG 34
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/64 (42%), Positives = 33/64 (51%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G G PG G +G KG P L G+PG G PG G GV G+PG G G G
Sbjct: 204 ERGEPGEPGAAGAKGAKGQPGPPG--LVGEPGPEGEPGPVGPTGVPGLPGVKGDRGEQGA 261
Query: 245 KGQR 256
+G++
Sbjct: 262 RGEK 265
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPGL G G +G+ PG G G+PG G G G G+ G G G G+R
Sbjct: 224 GPPGLVGEPGPEGE--------PGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGER 274
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG G +G+KG + PG PGD G G G DG G G G G +G G
Sbjct: 102 GPPGDPGPKGNKGQP--GAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGPPG 156
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PG PG G PG G DG+ G PG G G G G
Sbjct: 934 PGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPG 968
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
PG G+ G PG GR G G G G G G KG+
Sbjct: 107 PGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGE 142
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PG+PG+ G PG G G G G G G +G G
Sbjct: 199 PGEPGERGEPGEPGAAGAKGAKGQPGPPGLVGEPG 233
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
PG PG G G G G G PG G G G G +
Sbjct: 104 PGDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPK 140
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
PG+ G+ G PG G G G PG G G G +G+
Sbjct: 202 PGERGEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGE 237
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPG 214
+ G+ G PG G +G +G I P G PG G G G G G PG
Sbjct: 936 DPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQSGPPGPPGPPG 986
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P R PG P PG PG PG + P GP+ P
Sbjct: 93 PPTPP-PQRRGPPGDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGP 151
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P DPG +P G P +PG G+ P + P GP+ P
Sbjct: 104 PGDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGP 154
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 167 GLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PG G G G PG+ GR G G +G+R
Sbjct: 102 GPPGDPGPKGNKGQPGAQGRPGAPGDRGER 131
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 EAGFIGPPG---LQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
E G GPPG +QG +G G LP D +PG G+ G PG G G G G G G
Sbjct: 134 EPGTDGPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESGPPGPAGPIGAVGDSGPRGERG 193
Query: 233 YLGVKGQR 256
LG++G +
Sbjct: 194 ELGIRGNK 201
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G +G G +GI GD+G P G PG VGL G G DG G PG G G G+
Sbjct: 276 GSVGKQGRKGITGDRGAQGKTGKQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPGKQGLP 335
Query: 248 GQ 253
G+
Sbjct: 336 GE 337
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+ G +GP G +G G+ G P D + G G G PG GRDGV G G G G G
Sbjct: 119 QQGMLGPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESGPPGPAG 178
Query: 242 VKG 250
G
Sbjct: 179 PIG 181
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G G+ G G KG P G PGD G+ G DG +G G+PG G G +G G
Sbjct: 115 GETGQQGMLGPAGAKGGLGEPGT--DGPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESG 172
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G GL+G+ G G P G+PG GLPG G G +G G G G GV G
Sbjct: 303 GTPGTVGLRGVTGPDGSNGQPGR--QGEPGKQGLPGESGAQGDSGDEGDGGAKGDKGVFG 360
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G G QG GD+GD D G G VGL G +G G G G FG G G G
Sbjct: 333 GLPGESGAQGDSGDEGDGGAKGD--KGVFGGVGLDGAEGEQGARGKSGDFGPIGPPGPLG 390
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G G G +G GD+G + G PG G PG G DG G G G G G
Sbjct: 235 DGGSDGKAGKEGKAGDRGAIGKTGNA--GLPGSTGAPGAAGSDGSVGKQGRKGITGDRGA 292
Query: 245 KGQREK 262
+G+ K
Sbjct: 293 QGKTGK 298
Score = 36.3 bits (80), Expect = 0.026
Identities = 25/62 (40%), Positives = 30/62 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G G PG G +GD GD D G GD G+ G G DG G G+ G++G G
Sbjct: 328 EPGKQGLPGESGAQGDSGD---EGD--GGAKGDKGVFGGVGLDGAEGEQGARGKSGDFGP 382
Query: 245 KG 250
G
Sbjct: 383 IG 384
Score = 35.1 bits (77), Expect = 0.059
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +2
Query: 104 EGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK*DYKVLL 283
+GD GD SD G+ G G G G+ G AG+PGS G G G G K K +
Sbjct: 230 KGDSGDG--GSDGKAGKEGKAGDRGAIGKTGNAGLPGSTGAPGAAGSDGSVGKQGRKGIT 287
Query: 284 ENQALKG 304
++ +G
Sbjct: 288 GDRGAQG 294
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2
Query: 143 LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
L G PG VG G +G G AG+ G G G LG GQ+
Sbjct: 83 LYGPPGPVGEGGPNGASGPAGVAGERGLPGGLGETGQQ 120
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVA---GIPGSFGRNGYLGVKG 250
PG G+ G G G GVA G+PG G G G+ G
Sbjct: 87 PGPVGEGGPNGASGPAGVAGERGLPGGLGETGQQGMLG 124
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/48 (27%), Positives = 17/48 (35%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P D G+ + PG P G PG + + P P GP
Sbjct: 141 PGDAGMQGSDGANGQPGLPGRDGVPGTVGESGPPGPAGPIGAVGDSGP 188
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/60 (45%), Positives = 28/60 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPGL G G G P PG PG G PG DG G G+PG G G G G
Sbjct: 250 GLQGPPGLNGQAGTSG---APG--FPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPG 304
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/62 (43%), Positives = 31/62 (50%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+AG G PG G G +G L D +PG PG G G+ G G GIPGS G G G
Sbjct: 260 QAGTSGAPGFPGAPGFQGPPGL--DGMPGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGP 317
Query: 245 KG 250
G
Sbjct: 318 AG 319
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPG--GPMNPA 67
P PG P P G P +PG PG G +P IP PG GP PA
Sbjct: 267 PGFPGAPGFQGPPGLDGMPGAPGMPG--PQGYPGGSGAPGIPGSPGMPGPPGPA 318
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPG-KISDGSRVSPLSPSIPCRPGGPMNP 70
P P PG P PG P PG G G+ P SP +P P GP P
Sbjct: 267 PGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMP-GPPGPAGP 320
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
PG P P PG +PG PG P P+ P R G
Sbjct: 285 PGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAGPT-PIRYNG 327
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSPGCPG 145
P P P G P P PG+P PG PG
Sbjct: 285 PGAPGMPGPQGYPGGSGAPGIPGSPGMPGPPG 316
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP +P+ P+ P+ P +PT P P +D + P P++P P P P
Sbjct: 416 PSDPTDPTVPSDPTVPSDPTDPTVPSDPTDPTVPSDPTDPT--VPSDPTVPAGPTVPSGP 473
Query: 69 A 67
A
Sbjct: 474 A 474
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P DP +P+ P+ PS+P +PT P P SD + P PS P P P +P
Sbjct: 395 PTVPSDPTVPSDPTVPSDPTVPSDPTDPTVPSDPTVPSDPT--DPTVPSDPTDPTVPSDP 452
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCP-GKISDGSRVSPLSPSIPCRPGGPMN 73
P P P P DP +PA P+ PS P PT P P G P P++P P P
Sbjct: 449 PSDPTDPTVPSDPTVPAGPTVPSGPAVPTGPTVPSGPTVPSGPTVPSGPTVPSGPTVPSG 508
Query: 72 P 70
P
Sbjct: 509 P 509
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVS-PLSPSIPCRPGGPMN 73
P P P P DP +P+ P+ PS+P P+ P P SD + S P P++P P P
Sbjct: 389 PTVPSDPTVPSDPTVPSDPTVPSDPTVPSDPTDPTVPSDPTVPSDPTDPTVPSDPTDPTV 448
Query: 72 PA 67
P+
Sbjct: 449 PS 450
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GL G +G G +P I P G PG +GLPG G G G PG G G G G
Sbjct: 135 GKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDPGKQGLTGLTGAPG 192
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
GP G +GI G KGD + G PGD G G GR G G+PG G
Sbjct: 225 GPKGARGITGPKGDAGITGP--KGTPGDPGPTGSRGRPGKPGLPGDLNNIG 273
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/62 (40%), Positives = 29/62 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G G +G EG +G T LP G G G PG G G G PG G G G+KG
Sbjct: 120 GRTGAKGSRGKEGKRGKTGLP-----GTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKG 174
Query: 251 QR 256
+
Sbjct: 175 DK 176
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/57 (43%), Positives = 28/57 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G +G G KG S G+ G GLPG DGRDG G+PG G G G G
Sbjct: 114 GKRGSRGRTGAKG-----SRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIG 165
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/51 (45%), Positives = 25/51 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
G PG G G G LP +PG GD G PG G G+ G PGS G G
Sbjct: 150 GVPGPIGPIGPPGKIGLPG--IPGMKGDKGDPGKQGLTGLTGAPGSPGLPG 198
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS 217
G IG PG+ G++GDKGD PG GL G G G G+PG+
Sbjct: 162 GKIGLPGIPGMKGDKGD-----------PGKQGLTGLTGAPGSPGLPGN 199
Score = 35.5 bits (78), Expect = 0.045
Identities = 24/60 (40%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRV-SPLSPSIPCRPG--GPMNP 70
P P D G P G P SPG PG + S V S SPS C PG GP P
Sbjct: 167 PGIPGMKGDKGDPGKQGLTGLTGAPGSPGLPGNCINKSNVGSVASPSFYCLPGKLGPQGP 226
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+ G GP GL+G G G L L G G G G+ GR G+ G+PG GRNG G
Sbjct: 185 KTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPG 244
Query: 242 VKGQ 253
G+
Sbjct: 245 KNGR 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT----LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G GP GL+G+ G +G+ L S + G+PG G G +G G G G G G+
Sbjct: 304 GATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFT 363
Query: 239 GVKGQR 256
G+KG +
Sbjct: 364 GLKGAK 369
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G GP GL+G G G +PG+ G G PG +GR G G G G G
Sbjct: 205 GLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLT 264
Query: 239 GVKGQR 256
G KG R
Sbjct: 265 GSKGAR 270
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 62 SEAGFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
S G GP G G G KG L P G G G GF G G+ G+ G+ G GY
Sbjct: 112 SATGKQGPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYR 171
Query: 239 GVKGQR 256
G+KG R
Sbjct: 172 GLKGSR 177
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/91 (31%), Positives = 42/91 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
++G G PG G G KG + P G G G G G+ G+ G G GRNG G
Sbjct: 236 KSGRNGTPGKNGRPGAKG-AMGPRGYR-GLTGSKGARGARGKQGLRGATGRPGRNGVPGR 293
Query: 245 KGQREK*DYKVLLENQALKGYKVSKVNEGLK 337
G + K + + L+G + + N+GL+
Sbjct: 294 PGSKGKTGARGATGPRGLRGLRGPQGNQGLR 324
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G GL+G G G +P PG G G G G G+ G+ G G G G+KG
Sbjct: 271 GARGKQGLRGATGRPGRNGVPGR--PGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKG 328
Query: 251 QR 256
R
Sbjct: 329 SR 330
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G +GP G +G+ G KG G+PG G+PG G G G G+ G G
Sbjct: 253 GAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLR 312
Query: 239 GVKGQREK*DYKVLLENQALKGYKVSKVNEG 331
G++G + NQ L+G K S+ +G
Sbjct: 313 GLRGPQ---------GNQGLRGLKGSRGVQG 334
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKG---DTLLPSDILP----GQPGDVGLPGFDGRDGVAGIPGSFGRN 229
G IGP G G++G KG T L P G+ G G+PG G+ G G PG G
Sbjct: 355 GKIGPRGFTGLKGAKGVRGATGLRGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQ 414
Query: 230 GYLGVKGQ 253
G G+KG+
Sbjct: 415 GLKGLKGK 422
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G+ G G +G+ G +G T L G G G PG G G+ G G+ G GY G
Sbjct: 169 GYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKGARGATGPRGYTGRT 228
Query: 248 GQR 256
G R
Sbjct: 229 GLR 231
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQRE 259
G PG G G G P LPG+ GD GL G G G+ G PG G G +G G
Sbjct: 115 GAPGAPGAPGPPGSPGAPG--LPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPGPEP 172
Query: 260 -K*DYKVLLENQALKGYKVSKVNEGLKVS 343
++ V+ E + KG+ K E +KV+
Sbjct: 173 IMPNFTVICEGE--KGWLQCKQYELIKVT 199
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLP----SDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
AG GPPG G +G G P S PG PG+ G PG G G AG+PG+ G G
Sbjct: 102 AGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGP 161
Query: 236 LGVKG 250
G G
Sbjct: 162 QGPMG 166
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISD-GSRVSPLSPSIPCRPG--GPMNP 70
P P + G P P P PG+P +PG PG+ D G + +P + +P PG GP P
Sbjct: 105 PGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGP 164
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G GPPG G G G+ P + + G PG G G DG G G PG G G G+
Sbjct: 79 GLNGPPGPPGAPGPPGE---PGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLP 135
Query: 248 GQR 256
G++
Sbjct: 136 GEK 138
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKI-SDGSRVSPLSPSIPCRPGGPMNP 70
P PG P P P G PG PG + DG+ +P +P P PG P P
Sbjct: 84 PGPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLP 135
Score = 34.7 bits (76), Expect = 0.078
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P P P P G+ P P + G +PG PG + G SP +P +P G P
Sbjct: 87 PGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPG--APGPPGSPGAPGLPGEKGDP 141
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P PG P P +PG +PG G P +P +P P GPM P
Sbjct: 117 PGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAG--------LPGAPGLP-GPQGPMGP 167
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P P +PG P PG+ G PG + G+ P SP P PG +P
Sbjct: 84 PGPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPG--APGAPGPPGSPGAPGLPGEKGDP 141
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIP 97
P P P P PG+P P G P + G PG P+ P P
Sbjct: 120 PGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPGP 170
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/60 (43%), Positives = 28/60 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G +G PG G EG KGD G GD G PG DG+ G G G G G G KG
Sbjct: 68 GAVGSPGPMGPEGPKGDK--------GDKGDTGAPGIDGQPGPQGEKGETGPQGEQGPKG 119
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 77 IGPPGLQGIEGDKG-DTLLPSDILPGQPGDVGLPG---FDGRDGVAGIPGSFGRNGYLGV 244
+GPPG++G +GD G D + G G G PG F G+DG+ G PG G G G
Sbjct: 1 MGPPGVKGPQGDNGRDGPIGPKGDQGDIGPQGPPGERGFSGKDGLNGTPGKDGPEGPQGP 60
Query: 245 KG 250
KG
Sbjct: 61 KG 62
Score = 36.7 bits (81), Expect = 0.019
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G IGP G G G G D L G PG G G G G +G PG+ G G +G
Sbjct: 24 DQGDIGPQGPPGERGFSG-----KDGLNGTPGKDGPEGPQGPKGDSGSPGAVGSPGPMGP 78
Query: 245 KGQR 256
+G +
Sbjct: 79 EGPK 82
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PG G G +GRDG G G G G G G+R
Sbjct: 2 GPPGVKGPQGDNGRDGPIGPKGDQGDIGPQGPPGER 37
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDG 196
E G GP G QG +GD G P G G G G DG G
Sbjct: 105 EKGETGPQGEQGPKGDTGPQGQPGP--EGPQGPAGPSGADGPQG 146
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT----LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G IG G++G EG+KG++ L+ ++ G+ G G PG G DG G+PG G +G
Sbjct: 276 GMIGDRGVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDDGRP 335
Query: 239 GVKG 250
G G
Sbjct: 336 GENG 339
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +2
Query: 71 GFIGPPGLQGIEG---DKGDTLLPSDILPGQPGDVGLPG---FDGRDGVAGIPGSFGRNG 232
G G PGL G EG ++G P PG G GLPG DGR G G PGS G +G
Sbjct: 291 GESGAPGLIGAEGPVGEEGGRGRPGK--PGADGPEGLPGPAGDDGRPGENGAPGSRGNSG 348
Query: 233 YLGVKGQREK 262
G G + K
Sbjct: 349 PAGFPGAKGK 358
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/63 (38%), Positives = 30/63 (47%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG +G G G G +G P PGQPG G+ G GR G G+ G G G +G
Sbjct: 33 AGGVGANGPSGRGGSQGPPGPPG--APGQPGPRGIKGPPGRAGGTGLMGYLGEPGVVGGA 90
Query: 248 GQR 256
G +
Sbjct: 91 GPK 93
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGR---DGVAGIPGSFGRN 229
G +G PGL GI+G +G+ I PG G VG G GR G G PG+ G+
Sbjct: 1 GQVGLPGLNGIDGPEGERGQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQP 60
Query: 230 GYLGVKG 250
G G+KG
Sbjct: 61 GPRGIKG 67
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
+G +G G QG G G T + + + G G G G G G G PG G G G
Sbjct: 213 SGDLGAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPA 272
Query: 248 GQR 256
G+R
Sbjct: 273 GKR 275
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGR 226
E G G PG G +G +G D G+PG+ G PG G G AG PG+ G+
Sbjct: 307 EEGGRGRPGKPGADGPEGLPGPAGD--DGRPGENGAPGSRGNSGPAGFPGAKGK 358
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 74 FIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
F G G G +G+ GD P PG+PG G G G+ G+ G G G G G G
Sbjct: 238 FQGNVGKSGSKGESGDKGQPGK--PGKPGSRGQAGPAGKRGMIGDRGVRGAEGNKGESG 294
Score = 35.1 bits (77), Expect = 0.059
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G +G G +G GDKG PG+PG PG G+ G AG G G G G +G
Sbjct: 240 GNVGKSGSKGESGDKGQ--------PGKPGK---PGSRGQAGPAGKRGMIGDRGVRGAEG 288
Query: 251 QR 256
+
Sbjct: 289 NK 290
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G++G G G T L + G+PG V G G G +G PG G+ G G KG
Sbjct: 61 GPRGIKGPPGRAGGTGLMGYL--GEPGVV---GGAGPKGSSGRPGDVGQAGASGPKG 112
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDG 196
G++G PG+ G G KG + G+PGDVG G G G
Sbjct: 79 GYLGEPGVVGGAGPKGSS--------GRPGDVGQAGASGPKG 112
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKIS-DGSRVSPLSPSIPCRPGGPMN 73
P P P P PGIP TP +P P P +P P K + P P PC P P
Sbjct: 17 PNIPSTPDEPPKPGIPCTPDKPHKPDIPCTPDEPHKPDIPCTPDEPYKPDRPCTPDEPHK 76
Query: 72 P 70
P
Sbjct: 77 P 77
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P TP P++P P P PS+P P P P P + ++ P P IPC P P P
Sbjct: 212 PCTPDKPYKPDRPCTPDEPSKPDIPCTPDKPYKPDR--PCTQDKPHKPDIPCTPDKPDKP 269
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -2
Query: 225 RPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
+P P IP TP +P P P +P P K P IPC P P P
Sbjct: 205 KPPKPDIPCTPDKPYKPDRPCTPDEPSK-----------PDIPCTPDKPYKP 245
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +2
Query: 104 EGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
+G G +P D PG PG +G PG G DG G PG+ G G G KG R
Sbjct: 31 QGHDGKNGIPGD--PGVPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSR 79
Score = 35.9 bits (79), Expect = 0.034
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G G GI GD G +P + PG+ G+ G G G G G PG G G GV+G
Sbjct: 32 GHDGKNGIPGDPG---VPGQLGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQG 86
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = -2
Query: 222 PKDPGIPA---TPSRPSNPGNPTSPGCPG 145
P DPG+P TP + N G PG PG
Sbjct: 40 PGDPGVPGQLGTPGKSGNDGRNGKPGAPG 68
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G +G PG G +G G PG PG G PG G G G+ G G
Sbjct: 47 GQLGTPGKSGNDGRNGK--------PGAPGPKGPPGPKGSRGPKGVQGPPG 89
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPS--DILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
GPPG G +G+ G+ P D PG PG G G+ G G G PG++G GY G
Sbjct: 1804 GPPGAIGWKGNPGNPAGPPGLDGPPGPPGPQGPKGWPGVPGPPGPPGAYGWKGYPG 1859
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDG-------RDGVAGIPGSFGRN 229
G GPPG G +G KG +P PG PG G G+ G RDG+ G PG G
Sbjct: 1823 GLDGPPGPPGPQGPKGWPGVPGP--PGPPGAYGWKGYPGNPAGPPGRDGIPGPPGRQGGK 1880
Query: 230 GYLGVKG 250
G G+ G
Sbjct: 1881 GPAGIPG 1887
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/54 (46%), Positives = 27/54 (50%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
G GPPG G G KG P+ PG+ G G PG G G AGIPG G G
Sbjct: 1841 GVPGPPGPPGAYGWKGYPGNPAGP-PGRDGIPGPPGRQGGKGPAGIPGIPGPGG 1893
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQRE 259
GPPGL G +G G P+ PG+ G +G PG G G PG G G +G+ G+ +
Sbjct: 1695 GPPGLPGPQGIPGYPGAPAGP-PGRDGPMGPPGPSGGQGP---PGDMGSMGPMGMGGEHK 1750
Query: 260 K*DYK 274
D+K
Sbjct: 1751 --DFK 1753
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIP-GSFGRNGYLGV 244
+G GPPGL G +G KG +PG PG G PG G G G P G G +G G
Sbjct: 1779 SGVDGPPGLAGPQGPKG--------MPGPPGPPGPPGAIGWKGNPGNPAGPPGLDGPPGP 1830
Query: 245 KG 250
G
Sbjct: 1831 PG 1832
Score = 35.1 bits (77), Expect = 0.059
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PG G +GLPG G DG G PG G G G+ G
Sbjct: 1673 PGPDGPMGLPGPQGPDGPKGPPGPPGLPGPQGIPG 1707
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQP-GDVGLPGFDGRDGVAGIPGS----FGRNGYLGVK 247
PP G G G LP P P G G PG G G+ G PG+ GR+G +G
Sbjct: 1666 PPPAPGPPGPDGPMGLPGPQGPDGPKGPPGPPGLPGPQGIPGYPGAPAGPPGRDGPMGPP 1725
Query: 248 G 250
G
Sbjct: 1726 G 1726
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTS-PGCPGKISDGSRVSPLS-PSIPCRPGGP 79
P P PG P NPGNP PG G P P +P PG P
Sbjct: 1797 PGPPGPPGPPGAIGWKGNPGNPAGPPGLDGPPGPPGPQGPKGWPGVPGPPGPP 1849
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 231 PFRPKDP-GIPATPSRPSNP-GNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P P G+P P P P G P PG PG G P +P+ P GPM P
Sbjct: 1672 PPGPDGPMGLPG-PQGPDGPKGPPGPPGLPG--PQGIPGYPGAPAGPPGRDGPMGP 1724
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PG+ PG P PG PG I G + +P +P+ P GP P
Sbjct: 1785 PGLAGPQGPKGMPGPPGPPGPPGAI--GWKGNPGNPAGPPGLDGPPGP 1830
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/60 (46%), Positives = 29/60 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GF GP GL GI G KG P PG G G+PG G DG G G G NG G G
Sbjct: 120 GFPGPMGLDGIPGLKG---FPGT--PGDQGRQGVPGKRGYDGAKGREGEDGANGPPGSPG 174
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDT-LLPSDIL-----P--GQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
GPPG +G +G KG T +LP+ + P G GD G+PG G G+ G PG G G
Sbjct: 226 GPPGKKGPKGPKGRTAILPNKAMIGAIPPFYGPKGDRGVPGRQGMYGLRGPPGRKGDQGT 285
Query: 236 LGVKG 250
G G
Sbjct: 286 RGPPG 290
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 GIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GI G KG+ P + L G PG G PG G G G+PG G +G G +G+
Sbjct: 111 GIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGREGE 163
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 143 LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
L G G G G DG G+ G PG+ G G GV G+R
Sbjct: 115 LKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKR 152
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLP---GFDGRDGVAGIPGSFGRNGYLGVKGQ 253
G+ G++G++G PG G G+P GF G G G G G+ GY G KG+
Sbjct: 111 GIIGLKGNQG--------FPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGYDGAKGR 160
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 158 GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
G G PG G G+ G PG G+ G G KG+
Sbjct: 208 GSKGTPGAPGDPGLYGPPGPPGKKGPKGPKGR 239
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G+ +E + G S PG PGD GL G G G G G GR L
Sbjct: 194 GIIYLEENCGMRFQGSKGTPGAPGDPGLYGPPGPPGKKGPKGPKGRTAIL 243
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/88 (34%), Positives = 42/88 (47%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG G PG G++G G D G PG G G +G G G PG G NG G++
Sbjct: 127 AGSPGMPGRNGLDGRPG-----MDGPMGMPGRDGTNGKEGSPGPPGAPGPPGVNGLQGLQ 181
Query: 248 GQREK*DYKVLLENQALKGYKVSKVNEG 331
G+R K L+ ++ ++G K + G
Sbjct: 182 GERGPIGPKGLMGDKGVQGLPGPKGDRG 209
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Frame = +2
Query: 71 GFIGPPG---LQGIEGDKGDT----LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRN 229
G GPPG LQG++G++G L+ + G PG G G G G G PG+ G
Sbjct: 167 GAPGPPGVNGLQGLQGERGPIGPKGLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDT 226
Query: 230 GYLGVKGQR 256
G G KG +
Sbjct: 227 GRKGEKGDK 235
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT----LLPSDILPGQPGDVGLPGFDGRDGVA 202
G +G G+QG+ G KGD L + PG GD G G G GVA
Sbjct: 191 GLMGDKGVQGLPGPKGDRGPTGLSGENGEPGARGDTGRKGEKGDKGVA 238
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK 262
G G G PG GR+G+ G PG G G G G K
Sbjct: 122 GPRGPAGSPGMPGRNGLDGRPGMDGPMGMPGRDGTNGK 159
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/60 (46%), Positives = 29/60 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GF GP GL GI G KG P PG G G+PG G DG G G G NG G G
Sbjct: 19 GFPGPMGLDGIPGLKG---FPGT--PGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPG 73
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 GIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GI G KG+ P + L G PG G PG G G G+PG G +G G +G+
Sbjct: 10 GIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGE 62
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 89 GLQGIEGDKG-DTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G+ G++G++G + D +PG G G PG GR GV G G G G G G
Sbjct: 10 GIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKRGDDGAKGREGEDG 64
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 143 LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
L G G G G DG G+ G PG+ G G GV G+R
Sbjct: 14 LKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVPGKR 51
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/57 (45%), Positives = 27/57 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG+ G G GD P LPG PG PG G G G G G NG LG G
Sbjct: 350 GPPGINGPPGPLGDVGPPG--LPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPG 404
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/58 (44%), Positives = 28/58 (48%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GPPG+ G G GD P LPG PG PG G G G G G NG LG G+
Sbjct: 435 GPPGINGPPGPLGDVGPPG--LPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGE 490
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFD---GRDGVAGIPGSFGRNGYLG 241
G +GPPGL G G + P LPG PG G PG + G G AG PG+ G GY G
Sbjct: 447 GDVGPPGLPGPPGPQMPPGPPG--LPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQG 504
Query: 242 VKG 250
G
Sbjct: 505 NHG 507
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/58 (44%), Positives = 28/58 (48%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GPPG+ G G GD P LPG PG PG G G G G G NG LG G+
Sbjct: 520 GPPGINGPPGPLGDVGPPG--LPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPGE 575
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFD---GRDGVAGIPGSFGRNGYLG 241
G +GPPGL G G + P LPG PG G PG + G G AG PG+ G GY G
Sbjct: 532 GDVGPPGLPGPPGPQMPPGPPG--LPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQG 589
Query: 242 VKG 250
G
Sbjct: 590 NHG 592
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFD---GRDGVAGIPGSFGRNGYLG 241
G +GPPGL G +G + P LPG PG G PG + G G G PG+ G GY G
Sbjct: 192 GDMGPPGLPGPQGPQMPPGPPG--LPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQG 249
Query: 242 VKG 250
G
Sbjct: 250 NHG 252
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GPPG+ G G G+ P LPG PG P G G G G G NG LG G+
Sbjct: 775 GPPGINGPPGQVGEMGPPG--LPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGE 830
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG IGPPGL G G G D+ G PG G PG G G+PG G G G
Sbjct: 85 AGAIGPPGLPGPNGVNGPPGELGDM--GPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTN 142
Query: 248 GQ 253
G+
Sbjct: 143 GE 144
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/63 (42%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFD---GRDGVAGIPGSFGRNGYLG 241
G +GPPGL G G + P LPG PG G PG + G G G PG+ G GY G
Sbjct: 362 GDVGPPGLPGPPGPQMPPGPPG--LPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQG 419
Query: 242 VKG 250
G
Sbjct: 420 NHG 422
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/57 (42%), Positives = 26/57 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG+ G G G+ P LPG PG P G G G G G NG LG G
Sbjct: 860 GPPGINGPPGQVGEMGPPG--LPGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPG 914
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/60 (43%), Positives = 27/60 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GP G+ G G GD P LPG PG PG G G G G G NG LG G
Sbjct: 262 GLPGPNGILGPPGPPGDMGPPG--LPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPG 319
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GPPG+ G G G+ P LPG PG P G G G G G NG LG G+
Sbjct: 690 GPPGINGPPGQIGEMGPPG--LPGPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPGE 745
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/63 (42%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFD---GRDGVAGIPGSFGRNGYLG 241
G +GPPGL G G + P LPG PG G PG + G G G PG+ G GY G
Sbjct: 277 GDMGPPGLPGPPGPQMPPGPPG--LPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQG 334
Query: 242 VKG 250
G
Sbjct: 335 NHG 337
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GPPG+ G G+ G+ + P+ LPG PG P G G G G G NG LG G+
Sbjct: 605 GPPGVNGPPGEIGE-IGPAG-LPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGE 660
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/62 (40%), Positives = 30/62 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G +GPPG G G + P LPG PG G PG +G G G G G G G+
Sbjct: 105 ELGDMGPPGPPGPPGPQMPPGPPG--LPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGL 162
Query: 245 KG 250
+G
Sbjct: 163 QG 164
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G +GPPGL G G P PG PG G PG +G G G G G G +G
Sbjct: 785 QVGEMGPPGLPGPPGPASPPSPPGP--PGPPGPKGPPGPNGPLGPPGECGPAGNAGGVGC 842
Query: 245 KG 250
+G
Sbjct: 843 QG 844
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/61 (42%), Positives = 27/61 (44%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
AG GP GL G G G PG PGD+G PG G G PG G G G K
Sbjct: 170 AGIQGPNGLPGPNGPLGP--------PGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPK 221
Query: 248 G 250
G
Sbjct: 222 G 222
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/62 (40%), Positives = 28/62 (45%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G IGP GL G G P PG PG G PG +G G G G G G +G
Sbjct: 615 EIGEIGPAGLPGPPGPASPPSPPGP--PGPPGPKGPPGPNGPLGPPGESGPAGNAGGVGY 672
Query: 245 KG 250
+G
Sbjct: 673 QG 674
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS-FGRNGYLGVKG 250
GPPGL G G KG + G PGDVG PG G G G G+ G G G+ G
Sbjct: 210 GPPGLPGAPGPKGPPGTNGPL--GPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGLPG 265
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/62 (38%), Positives = 29/62 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G +GPPGL G G P PG PG G PG +G G G G G G +G
Sbjct: 700 QIGEMGPPGLPGPPGPASPPSPPGP--PGPPGPNGPPGPNGPLGPPGECGPAGNAGGVGC 757
Query: 245 KG 250
+G
Sbjct: 758 QG 759
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS--DILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
EAG G PG G +G+ G+ P + PG PG G PG G G AG+PG G
Sbjct: 575 EAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGVNGPPGEIGEIGPAGLPGPPG 629
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQP-GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPGL G G G PG P G +G PG G +GV G PG G G G G
Sbjct: 64 GPPGLPGPPGPPG-----FQGPPGNPAGAIGPPGLPGPNGVNGPPGELGDMGPPGPPG 116
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/57 (43%), Positives = 27/57 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G G+ G G L P PG PGD+G PG G G PG G G G KG
Sbjct: 256 GPQGPNGLPGPNG-ILGP----PGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKG 307
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS----FGRNGYLGVK 247
GPPGL G G KG + G PGDVG PG G G G G+ G NG G
Sbjct: 295 GPPGLPGAPGPKGPPGTNGPL--GPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPP 352
Query: 248 G 250
G
Sbjct: 353 G 353
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS----FGRNGYLGVK 247
GPPGL G G KG + G PGDVG PG G G G G+ G NG G
Sbjct: 380 GPPGLPGAPGPKGPPGTNGPL--GPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPP 437
Query: 248 G 250
G
Sbjct: 438 G 438
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -2
Query: 225 RPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
+P PGI P + G P PG PG S S P P P P GP P
Sbjct: 773 QPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGP 824
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/62 (40%), Positives = 28/62 (45%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G +GPPGL G G PS PG PG G G G +G G PG G G G
Sbjct: 870 QVGEMGPPGLPGPPGPASP---PSP--PGPPGPPGPKGPPGPNGCLGPPGDAGPAGNTGG 924
Query: 245 KG 250
G
Sbjct: 925 AG 926
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS-FGRNGYLGVKG 250
GPPGL G G G ++ G PGDVG PG G G+ G G+ G G G+ G
Sbjct: 125 GPPGLPGPPGPAGPPGTNGEL--GPPGDVGPPGNPGGPGLQGNHGNPAGIQGPNGLPG 180
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -2
Query: 225 RPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
+P PGI P + G P PG PG S S P P P P GP P
Sbjct: 688 QPGPPGINGPPGQIGEMGPPGLPGPPGPASPPSPPGPPGPPGPNGPPGPNGP 739
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSP----SIPCRPGGP 79
PG+P P PG P PG PG PL P P PGGP
Sbjct: 282 PGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGP 330
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSP----SIPCRPGGP 79
PG+P P PG P PG PG PL P P PGGP
Sbjct: 367 PGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGP 415
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
PG+P P S P P PG PG PL P C P G
Sbjct: 707 PGLPGPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPGECGPAG 750
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
PG+P P S P P PG PG PL P C P G
Sbjct: 792 PGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGPAG 835
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PG+P P PG P PG PG PL P P G P NP
Sbjct: 452 PGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGP--PGEAGPPGNP 497
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PG+P P PG P PG PG PL P P G P NP
Sbjct: 537 PGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGP--PGEAGPPGNP 582
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = -2
Query: 225 RPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
+P PGI P + G P PG PG S S P P P P GP
Sbjct: 858 QPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGP 906
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS--DILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
EAG G PG G +G+ G+ P + PG PG G PG G G G+PG G
Sbjct: 490 EAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPG 544
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
P G QG G G + PGQ G++G PG G G A P G G G KG
Sbjct: 764 PAGSQGPNGQPGPPGINGP--PGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKG 817
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
P G QG G G + PGQ G++G PG G G A P G G G KG
Sbjct: 849 PAGSQGPNGQPGPPGINGP--PGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKG 902
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/56 (41%), Positives = 24/56 (42%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
P G QG G G + PG GDVG PG G G PG G G G KG
Sbjct: 339 PAGPQGPNGQPGPPGINGP--PGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKG 392
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PG P P G PG PG S SP P P P GP P
Sbjct: 859 PGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGPPGPPGPKGPPGP 906
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Frame = -2
Query: 249 PLTPR*PFRPKD---PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSP----SIPCR 91
PL P P P D PG+P PG P PG PG PL P P
Sbjct: 184 PLGP--PGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGN 241
Query: 90 PGGP 79
PGGP
Sbjct: 242 PGGP 245
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PF-RPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMN 73
P P+ P +P PG+ P G PG PG S S P P P P GP
Sbjct: 594 PAGPQGPNGQPGPPGVNGPPGEIGEIGPAGLPGPPGPASPPSPPGPPGPPGPKGPPGPNG 653
Query: 72 P 70
P
Sbjct: 654 P 654
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
AG G G QG G+ P+ PG PG G PG G G G+PG G
Sbjct: 664 AGNAGGVGYQGNHGNPAGVQGPNG-QPGPPGINGPPGQIGEMGPPGLPGPPG 714
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P P PG P P PG P G PG ++G P P PGGP
Sbjct: 112 PGPPGPPGPQMPPGPPGLPGPPGPAGPPG--TNGELGPPGDVGPPGNPGGP 160
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G PG QG G+ P+ PG PG G PG G G G+PG G
Sbjct: 413 GGPGYQGNHGNPAGPQGPNG-QPGPPGINGPPGPLGDVGPPGLPGPPG 459
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P P A P P PG PG PG P P +P PG P
Sbjct: 30 PPPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGP--PGLPGPPGPP 75
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSP----GCPGKISDGSRVSPLS----PSIPC 94
PL P P PG P P N GNP P G PG PL P +P
Sbjct: 484 PLGP--PGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPG 541
Query: 93 RPGGPMNP 70
PG M P
Sbjct: 542 PPGPQMPP 549
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +2
Query: 146 PGQPGDVGLPGF------DGRDGVAGIPGSFGRNGYLGVKG 250
PG PG G PGF +G G G+PG G G+ G G
Sbjct: 42 PGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPG 82
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQP-GDVGLPGFDGRDGVAGIPGS-FGRNGYLGVKG 250
PPG G +G G P P P G GLPG G G G PG+ G G G+ G
Sbjct: 41 PPGPPGPDGPPG---FPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPPGLPG 95
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PG P PG+ PG PG G ++ P P +P P GP P
Sbjct: 179 PGPNGPLGPPGPPGDMGPPGLPG--PQGPQMPPGPPGLPGAP-GPKGP 223
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSP----GCPGKISDGSRVSPLS----PSIPCRPGGPMNP 70
PG P P N GNP P G PG PL P +P PG M P
Sbjct: 324 PGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPP 379
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 249 PLTPR*PF-RPKDPGIPATPSRPSNPGNPTSPGCPG-KISDGSRVSPLSPSIPCRPG--G 82
P P+ P +P PGI P + G P PG PG ++ G P +P PG G
Sbjct: 339 PAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNG 398
Query: 81 PMNP 70
P+ P
Sbjct: 399 PLGP 402
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSP----GCPGKISDGSRVSPLS----PSIPCRPGGPMNP 70
PG P P N GNP P G PG PL P +P PG M P
Sbjct: 409 PGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPP 464
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPT-------SPGCPGKISDGSRVSPLSPSIPCR 91
PL P P PG P P N GNP PG PG + + P+
Sbjct: 569 PLGP--PGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGVNGPPGEIGEIGPAGLPG 626
Query: 90 PGGPMNP 70
P GP +P
Sbjct: 627 PPGPASP 633
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 210 GIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
G+P P S P P PG PG PL P P G
Sbjct: 623 GLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGESGPAG 665
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PG P PG+ PG PG G ++ P P +P P GP P
Sbjct: 264 PGPNGILGPPGPPGDMGPPGLPG--PPGPQMPPGPPGLPGAP-GPKGP 308
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P PG P P PG PG PG P + P P G + P
Sbjct: 273 PGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDVGP 323
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 249 PLTPR*PF-RPKDPGIPATPSRPSNPGNPTSPGCPG-KISDGSRVSPLSPSIPCRPG--G 82
P P+ P +P PGI P + G P PG PG ++ G P +P PG G
Sbjct: 424 PAGPQGPNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGING 483
Query: 81 PMNP 70
P+ P
Sbjct: 484 PLGP 487
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGG 82
PG+P P S P P PG PG L P P G
Sbjct: 877 PGLPGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPGDAGPAG 920
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
PGI P G P +PG PG G+ +P P P GP
Sbjct: 479 PGINGPLGPPGEAGPPGNPGGPG--YQGNHGNPAGPQGPNGQPGP 521
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
PGI P G P +PG PG G+ +P P P GP
Sbjct: 564 PGINGPLGPPGEAGPPGNPGGPG--YQGNHGNPAGPQGPNGQPGP 606
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPG 145
P P PG + PS P PG P G PG
Sbjct: 877 PGLPGPPGPASPPSPPGPPGPPGPKGPPG 905
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG +G G +G + PG PG G PG DGR G G G G+ G G +G
Sbjct: 138 GHPGQKGTRGRRGQRGRRGN--PGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGERG 192
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPG G G KG G PG G G G+DG G GS G G G KG+R
Sbjct: 132 GPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGEKGER 191
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRN---GYLGVKGQREK*DYKVLLENQALKGYKVS 316
PG G G PG G+ G G G GR G G KG K + + ++ +KG K
Sbjct: 128 PGPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSKGMKGQKGE 187
Query: 317 KVNEGLKV 340
K G+ V
Sbjct: 188 KGERGIGV 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = -2
Query: 252 CPLTPR*P-FRPKDPGIPATPSRPS------NPGNPTSPGCPGKISDGSR 124
CP PR P RP PG T R NPG+P G PGK DG R
Sbjct: 126 CPPGPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGK--DGRR 173
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/82 (36%), Positives = 37/82 (45%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E GF G G +G +G KG+ S G PGD G G G G G G G G LG
Sbjct: 21 EQGFSGVKGKEGRDGVKGER--GSKGKSGLPGDKGPVGPPGHPGHKGPTGESGPTGALGA 78
Query: 245 KGQREK*DYKVLLENQALKGYK 310
KGQ+ + K + G+K
Sbjct: 79 KGQKGRMGLKGDAGYDGVDGFK 100
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDIL--PGQPGDVGLPG---FDGRDGVAGIPGSFGRN 229
+ G +GPPG G +G G++ P+ L GQ G +GL G +DG DG G+PG G
Sbjct: 51 DKGPVGPPGHPGHKGPTGESG-PTGALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQ 109
Query: 230 GYLGVKGQR 256
G G G R
Sbjct: 110 GDPGKPGIR 118
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GL G G GD PG+ G G+ G +GRDGV G GS G++G G KG
Sbjct: 2 GLMGSRGTPGDRGPRGP--PGEQGFSGVKGKEGRDGVKGERGSKGKSGLPGDKG 53
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/80 (35%), Positives = 36/80 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQRE 259
G PG++G EG +G + I G PG G G G DG G PG G G G R
Sbjct: 113 GKPGIRGHEGLQGVSGKAGSI--GDPGPNGASGMPGFDGTKGDPGDEGNEGLPGDIVPRY 170
Query: 260 K*DYKVLLENQALKGYKVSK 319
K +L + + L K+ K
Sbjct: 171 KGHLVILDKREILDESKILK 190
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKG-DTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G G G G++GD G D + LPG PG G PG G G G+ G G+ G +G
Sbjct: 77 GAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDP 136
Query: 248 G 250
G
Sbjct: 137 G 137
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK 262
G PGD G G G G +G+ G GR+G G +G + K
Sbjct: 8 GTPGDRGPRGPPGEQGFSGVKGKEGRDGVKGERGSKGK 45
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 125 LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
L+ S PG G G PG G GV G G G G G KG+
Sbjct: 3 LMGSRGTPGDRGPRGPPGEQGFSGVKGKEGRDGVKGERGSKGK 45
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT---LLPSDILPGQPG 160
G G PG G +GD GD LP DI+P G
Sbjct: 140 GASGMPGFDGTKGDPGDEGNEGLPGDIVPRYKG 172
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 LQGIEGDKGDTLLPS---DILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
+QG+ G++GD P ++ P GQPG G PG G G G+PG G+ G G G
Sbjct: 10 VQGVTGEQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIG 66
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLP-SDILPGQPGDVGLPGFDGRD---GVAGIPGSFGRNG 232
E G GPPG +G G +G S LPG+ G G+PG G+ G G PGS G G
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTG 75
Query: 233 YLGVKGQR 256
LG G +
Sbjct: 76 DLGPPGAK 83
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+ G +GPPG +G+ G + LP + G PG G PG G G+ G G G G LG
Sbjct: 73 DTGDLGPPGAKGLPGAQ-QYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDTGPLG 131
Query: 242 VKGQ 253
KGQ
Sbjct: 132 PKGQ 135
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTL---LPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G IG PG +G GD G LP G PG +G G G G G PG G NG +G
Sbjct: 63 GTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMG 122
Query: 242 VKG 250
KG
Sbjct: 123 KKG 125
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G IG G G +GD G L P PG PG + +PG G DG G G G G G+KG
Sbjct: 113 GIIGMNGAMGKKGDTGP-LGPKG-QPGSPG-IDIPGPKGMDGPPGEKGLPGVQGDPGIKG 169
Query: 251 QR 256
+
Sbjct: 170 PK 171
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/64 (42%), Positives = 31/64 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G IGPPG G +G K DT PG PG G G G G G PG+ G G G
Sbjct: 198 DQGPIGPPGRPGPKGPK-DTCPRCP--PGPPGPKGKRGETGPRGRPGEPGADGVRGPDGS 254
Query: 245 KGQR 256
G+R
Sbjct: 255 TGER 258
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
GP G G+ G++G +P G PG +G PG G G G PG+ G G
Sbjct: 36 GPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTGDLGPPGAKGLPG 87
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPG+ G G +G + + G PG G+PG R G+ G G GR G G+KG
Sbjct: 173 GPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPG---RIGIKGEKGKTGRKGDSGMKGDD 229
Query: 257 EK*DYKVLLENQALKGYKVSKVNEGLKV 340
K K + G+K K + G+ V
Sbjct: 230 GKIGQKGDRGERGETGFKGEKGDAGISV 257
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 101 IEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK 262
++GD G P + G+ G G+ G G GV GIPGS G G +G+KG++ K
Sbjct: 165 LKGDPGPPGPPG--IMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGK 216
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +2
Query: 140 ILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
IL G PG G PG GR G GI G G G G+ G
Sbjct: 164 ILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPG 200
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/56 (42%), Positives = 28/56 (50%)
Frame = +2
Query: 83 PPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PPG GI G +G LPG G G PG+ G G+AG PG G G +G G
Sbjct: 81 PPGPPGIPGPRG--------LPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPMGPPG 128
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/60 (38%), Positives = 27/60 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPG QG+ G +G P PG G+PG G G G G G G G+ G
Sbjct: 54 GTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGIAG 113
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/51 (43%), Positives = 22/51 (43%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G GP GL G G KG P G PG G PG G G G PG G
Sbjct: 86 GIPGPRGLPGYRGPKGP---PG--YQGMPGIAGAPGPRGPPGPMGPPGPHG 131
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
PG G G PG G GV G PG+ G G
Sbjct: 50 PGPQGTKGPPGSQGLSGVQGYPGAPGPRG 78
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
PR P PGIP P G PG G P P P P GP
Sbjct: 76 PRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPMGPPGP 129
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 101 IEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQREK 262
++GD G P + G+ G G+ G G GV GIPGS G G +G+KG++ K
Sbjct: 43 LKGDPGPPGPPG--IMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGK 94
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG+ G G +G + + G PG G+P GR G+ G G GR G G+KG
Sbjct: 51 GPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIP---GRIGIKGEKGKTGRKGDSGMKG 105
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +2
Query: 140 ILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
IL G PG G PG GR G GI G G G G+ G
Sbjct: 42 ILKGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPG 78
>SB_57582| Best HMM Match : efhand (HMM E-Value=3.8e-05)
Length = 520
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPC-RP-GGPM 76
P P P RPK P PA+P RP +P P+SP P + + S SI RP P
Sbjct: 288 PKRPSSPQRPKSPNRPASPQRPRSPNRPSSPQRPRSPNRPASTSQSPSSIMLDRPDSSPA 347
Query: 75 NPA 67
PA
Sbjct: 348 RPA 350
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPG G G G + +PG G G PG G+ G G PG GRNG G G
Sbjct: 134 GHPGPPGPSGPPGRNG-----LNGIPGVSGKQGPPGPPGKRGRRGHPGEPGRNGTHGSPG 188
Query: 251 QREK 262
R K
Sbjct: 189 WRGK 192
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/62 (40%), Positives = 31/62 (50%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
+G G G GI G G PS PG+ G G+PG G+ G G PG GR G+ G
Sbjct: 121 SGIPGTHGKNGIPGHPGPPG-PSGP-PGRNGLNGIPGVSGKQGPPGPPGKRGRRGHPGEP 178
Query: 248 GQ 253
G+
Sbjct: 179 GR 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 98 GIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GI G G +P PG PG G PG +G +G+ G+ G G G G +G+R
Sbjct: 122 GIPGTHGKNGIPGH--PGPPGPSGPPGRNGLNGIPGVSGKQGPPGPPGKRGRR 172
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/65 (40%), Positives = 32/65 (49%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
+G GPPG G G +G P + PG+ G G PG+ G+ G G G G G GV
Sbjct: 157 SGKQGPPGPPGKRGRRGH---PGE--PGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVP 211
Query: 248 GQREK 262
GQ K
Sbjct: 212 GQPGK 216
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 80 GPPG---LQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPG L GI G G P PG+ G G PG GR+G G PG G+ G G G
Sbjct: 143 GPPGRNGLNGIPGVSGKQGPPGP--PGKRGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMG 200
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDT-LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GPPG +G G G+ + PG G G G G G G PG G+ G G G+R
Sbjct: 164 GPPGKRGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPGER 223
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQP-GDVGLPGFDGRDGVAGIPGSFGRNG 232
G G PG G G G P P G G PG G+ G AG PG G G
Sbjct: 173 GHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPGERGPPG 227
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 240 PR*PFRP-KDPGIPATPSRPSNPGNPTSPGCPGK 142
PR P P PG P P +P G+P G PG+
Sbjct: 195 PRGPMGPIGPPGTPGVPGQPGKAGSPGERGPPGR 228
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRN 229
G G PG +G G +G P + G PG G+PG G+ G G G GR+
Sbjct: 182 GTHGSPGWRGKTGPRG----PMGPI-GPPGTPGVPGQPGKAGSPGERGPPGRD 229
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/62 (43%), Positives = 29/62 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GP G G G KG PG PG+VG PG G G G GS G G G+
Sbjct: 36 EQGPFGPKGAGGEMGSKGP--------PGVPGEVGKPGPIGYQGREGSEGSTGVYGMKGM 87
Query: 245 KG 250
KG
Sbjct: 88 KG 89
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/62 (40%), Positives = 29/62 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GP G QG G G P + G+PG G PG G G G G G G +G+KG
Sbjct: 227 GIRGPQGKQGGVGPTGGHGPPGPM--GEPGRKGSPGDIGYVGPKGKLGDRGPQGPVGIKG 284
Query: 251 QR 256
R
Sbjct: 285 IR 286
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G IG GL+G G +GD + G+ G VG G G G G PG G G +G
Sbjct: 207 ETGPIGGQGLEGRTGVQGDDGIRGP--QGKQGGVGPTGGHGPPGPMGEPGRKGSPGDIGY 264
Query: 245 KGQREK 262
G + K
Sbjct: 265 VGPKGK 270
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G++GP G G G +G + + G G +G G G G+ G G+ GR G G
Sbjct: 261 DIGYVGPKGKLGDRGPQGPVGIKG--IRGASGPIGDSGIKGGYGLMGEKGTAGRLGERGK 318
Query: 245 KG 250
KG
Sbjct: 319 KG 320
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
G G+QG G GD + +PG PG +PG G G G+PG+ G G G+KG+
Sbjct: 115 GEAGVQGPTGPAGDPGMTG--VPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGLKGE 170
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRD 193
+ G G PG GI G+ LP + LPG PGD G PG G +
Sbjct: 128 DPGMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGLKGEE 171
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSR 124
P + G+P P NPG+P PG G+ G+R
Sbjct: 144 PGEGGLPGGNGLPGNPGDPGRPGLKGEEFRGAR 176
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 GFIGPPGLQGI-EGDKGDTLLPSDILPGQPGDVGLPGFDGRDG-VAGIPGSFGRNGYLGV 244
GF+G P +GD G + G G++G G G G PG GR G G+
Sbjct: 8 GFLGLPVFYTFPQGDPGPAAME-----GNKGELGAKGEKGLQGNTPDQPGPPGRRGSAGM 62
Query: 245 KGQ 253
KG+
Sbjct: 63 KGE 65
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 95 QGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
QG +G G +P +PG+PG G G DGR+G G PG G G G +G +
Sbjct: 31 QGHDGKNGIPGIPG--VPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPK 82
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG+ G+ G G PG+ G+ G G G G G PG G G GV+G
Sbjct: 38 GIPGIPGVPGKPGT--------PGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQG 86
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PGIP P +P PG + G GK P P P G P
Sbjct: 40 PGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGP 87
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPG 145
P P PG P TP + N G PG PG
Sbjct: 40 PGIPGVPGKPGTPGKSGNDGRNGKPGAPG 68
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G G PG G G G+ + PG PG G PG G G G+ G G
Sbjct: 41 GIPGVPGKPGTPGKSGND--GRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS 217
G G PG G G+ G P PG G G G G GV G PG+
Sbjct: 44 GVPGKPGTPGKSGNDGRNGKPG--APGPKGPPGPKGSRGPKGVQGPPGT 90
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 210 GIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
GIP P P PG P G G+ P P P GP
Sbjct: 38 GIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGP 81
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-------LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
GPPG QG G KGD P PGQPG G G G G+ G G G G
Sbjct: 134 GPPGNQGPPGPKGDKGRPGKRGRRGPAGPPGQPGADGKQGIRGPPGIKGERGPKGDVGPR 193
Query: 239 GVKGQ 253
G+KG+
Sbjct: 194 GLKGE 198
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDV 166
G GPPG++G G KGD + P L G+PG +
Sbjct: 173 GIRGPPGIKGERGPKGD-VGPRG-LKGEPGRI 202
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCPGKISDG---SRVSPLSPSIPCRP 88
PLTPR PF P PGIP T + P PG P + P ++ G + PL+P IP
Sbjct: 313 PLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHALP--LTPGIPFTHALPLTPRIPFTH 370
Query: 87 GGPMNP 70
P+ P
Sbjct: 371 ALPLTP 376
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCPGKISDG---SRVSPLSPSIPCRP 88
PLTPR PF P PGIP T + P PG P + P ++ G + PL+P IP
Sbjct: 361 PLTPRIPFTHALPLTPGIPFTHALPLTPGIPFTHALP--LTPGIPFTHALPLTPRIPFTH 418
Query: 87 GGPMNP 70
P+ P
Sbjct: 419 ALPLTP 424
Score = 35.9 bits (79), Expect = 0.034
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCP-GKISDGSRVSPLSPSIPCRPGG 82
PLTPR PF P PGIP T + P P P + P + PL+P IP
Sbjct: 277 PLTPRIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPRIPFTHALPLTPGIPFTHAL 336
Query: 81 PMNP 70
P+ P
Sbjct: 337 PLTP 340
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCPGKISDG---SRVSPLSPSIPCRP 88
PLTP PF P P IP T + P PG P + P ++ G + PL+P IP
Sbjct: 349 PLTPGIPFTHALPLTPRIPFTHALPLTPGIPFTHALP--LTPGIPFTHALPLTPGIPFTH 406
Query: 87 GGPMNP 70
P+ P
Sbjct: 407 ALPLTP 412
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCPGKISDG---SRVSPLSPSIPCRP 88
PLT R PF P PGIP T + P P P + P ++ G + PL+P IP
Sbjct: 253 PLTSRIPFTHALPLTPGIPFTHALPLTPRIPFTHALP--LTPGIPFTHALPLTPRIPFTH 310
Query: 87 GGPMNP 70
P+ P
Sbjct: 311 ALPLTP 316
Score = 31.9 bits (69), Expect = 0.55
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCP-GKISDGSRVSPLSPSIPCRPGG 82
PLTPR PF P P IP T + P P P + P + PL+P IP
Sbjct: 217 PLTPRIPFTLALPLTPRIPFTHALPLTPRIPFTHVLPLTSRIPFTHALPLTPGIPFTHAL 276
Query: 81 PMNP 70
P+ P
Sbjct: 277 PLTP 280
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = -2
Query: 249 PLTPR*PFRPKDP---GIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P T P P+ P +P TP P P +PG P + PL+P IP P
Sbjct: 307 PFTHALPLTPRIPFTHALPLTPGIPFTHALPLTPGIP-----FTHALPLTPGIPFTHALP 361
Query: 78 MNP 70
+ P
Sbjct: 362 LTP 364
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -2
Query: 249 PLTPR*PFR---PKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRP 88
PLTPR PF P P IP T + P P + S + P+ + P P
Sbjct: 409 PLTPRIPFTHALPLTPRIPFTHALPLTPHDVMSEDIDAYLMQYQHQDPMLSAFPSPP 465
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRV-SPLSPSIPCRPGGPMN 73
P P+ P RP++P P P RP P P P P + PL P P P P+
Sbjct: 5 PHRPQEPHRPQEPHRPLEPHRPQEPHRPLEPHRPLEPHRPQEPHRPLEPHRPLEPHRPLE 64
Query: 72 P 70
P
Sbjct: 65 P 65
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = -2
Query: 342 ETFKPSFTFDTL*PLRAWFSRRTL*SYFSLCPLTPR*PFRPKDPGIPATPSRPSNPGNPT 163
E +P L P R R L + L P P+ P RP++P P P RP P P
Sbjct: 70 EPHRPLEPHRPLEPHRPQEPHRPLEPHRPLEPPRPQEPHRPQEPPRPQEPHRPQEPHRPL 129
Query: 162 SPGCPGKISDGSRV-SPLSPSIPCRPGGPMNP 70
P P + PL P+ P P+ P
Sbjct: 130 EPPRPQEQHRPQEPHRPLEPTRPQESHRPLEP 161
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -2
Query: 267 SYFSLCPLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRP 88
S+ L P P+ P RP++P P P RP P P P + P P P RP
Sbjct: 185 SHRPLEPPRPQEPHRPQEPHRPLEPPRPQEQHRPQEP--PKTLEPHRPQEPHRPQEPRRP 242
Query: 87 GGP 79
P
Sbjct: 243 LEP 245
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/88 (28%), Positives = 34/88 (38%)
Frame = -2
Query: 342 ETFKPSFTFDTL*PLRAWFSRRTL*SYFSLCPLTPR*PFRPKDPGIPATPSRPSNPGNPT 163
E +P + L P R R + L P P+ RP++P P RP P P
Sbjct: 178 EPTRPQESHRPLEPPRPQEPHRPQEPHRPLEPPRPQEQHRPQEPPKTLEPHRPQEPHRPQ 237
Query: 162 SPGCPGKISDGSRVSPLSPSIPCRPGGP 79
P P + ++ P P P RP P
Sbjct: 238 EPRRP--LEPHRQLEPHRPQEPHRPLEP 263
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDG-SRVSPLSPSIPCRPGGPMN 73
P P+ RP++P P P+RP P P P + PL P+ P P+
Sbjct: 131 PPRPQEQHRPQEPHRPLEPTRPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRPLE 190
Query: 72 P 70
P
Sbjct: 191 P 191
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G GPPG +G +G++G G G G PG DG+ G+ G PG G G G G
Sbjct: 26 GPAGPPGSKGEKGNRGRRGRR-----GPRGPPGKPGADGKPGIRGPPGPKGDKGEKGDAG 80
Query: 251 QR 256
R
Sbjct: 81 PR 82
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP----GQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G IGP G G +G KGD + I P G G G G G G G+PG G G
Sbjct: 294 GPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQ 353
Query: 239 GV 244
GV
Sbjct: 354 GV 355
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GPPGL ++ KG + LPG+ G G G G G GIPG G G G +G
Sbjct: 496 GPPGLCNVDVCKGTPGIQGPQGLPGKQGPAGPQGRQGASGPPGIPGLNGTVGPRGPQG 553
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GP G QG +G G +P L G G G GF G G+ G PG G G G +G
Sbjct: 523 GPAGPQGRQGASGPPGIPG--LNGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQG 577
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
G +GP G QG G +G P L G PG G G + G G PG G Y
Sbjct: 544 GTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQGPMGVNNSIGPPGPPGPQGPQVY 599
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
GP G +G G +G + P L G PG G G G +G AG PG G G G G +
Sbjct: 681 GPQGPRGFNGSEGP-VGPKG-LKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASGAK 737
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 71 GFIGPPGLQ---GIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G +GP GL+ G++GDKGDT G G G PG G G G G+ G
Sbjct: 693 GPVGPKGLKGDPGLKGDKGDT--------GANGTAGAPGVKGDKGDTGASGAKG 738
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/62 (40%), Positives = 27/62 (43%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G GP G G G KGDT P+D G GD G G G G G G G G G
Sbjct: 98 DTGATGPAGPTGPTGPKGDT-GPTD-PTGPNGDTGATGPTGPKGDTGATGPTGPKGDTGA 155
Query: 245 KG 250
G
Sbjct: 156 TG 157
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/62 (37%), Positives = 24/62 (38%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G GP G G G KGDT G GD G G G G G G G G G
Sbjct: 242 DTGATGPTGPTGPTGPKGDTGATGP--TGPKGDTGATGPAGPTGPTGPKGDTGATGPAGP 299
Query: 245 KG 250
G
Sbjct: 300 TG 301
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQP----GDVGLPGFDGRDGVAGIPGSFGRNG 232
+ G GP G G G KGDT P P GD G G G G G G G
Sbjct: 167 DTGATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTGATGPTDPTGPTGPKGPTGPKG 226
Query: 233 YLGVKG 250
+G G
Sbjct: 227 EIGATG 232
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/62 (37%), Positives = 26/62 (41%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G GP G G +GD G T P+ G GD G G G G G G G G G
Sbjct: 32 DTGATGPTGPTGPKGDTGAT-GPTG-PTGPKGDTGATGPTGPKGDTGATGPTGPKGDTGA 89
Query: 245 KG 250
G
Sbjct: 90 TG 91
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILP-GQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
+ G GP G G +GD G T P G GD G G G G G G G G
Sbjct: 152 DTGATGPTGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTGATG 208
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 95 QGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
QG +G G +P + G+PG G G DGR+G G PG G G G +G +
Sbjct: 31 QGHDGKNGIPGIPG--VHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPK 82
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG+ G+ G G PG+ G+ G G G G G PG G G GV+G
Sbjct: 38 GIPGIPGVHGKPGT--------PGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQG 86
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS 217
G G PG G G+ G P PG G G G G GV G PG+
Sbjct: 44 GVHGKPGTPGKSGNDGRNGKPG--APGPKGPPGPKGSRGPKGVQGPPGT 90
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -2
Query: 213 PGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PGIP +P PG + G GK P P P G P
Sbjct: 40 PGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGP 87
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDT----LLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYL 238
G +GP G +G G+KGD L + G G+ G+ G G G GI G G G
Sbjct: 209 GIMGPKGPKGDTGNKGDQGVQGLRGYNGTQGPRGNTGIMGPQGPKGDTGITGPKGPKGDT 268
Query: 239 GVKGQR 256
G KG +
Sbjct: 269 GNKGDQ 274
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILP-------GQPGDVGLPGFDGRDGVAGI 208
G +GP G G +G KGD + I P G GD G+ GF+G G +G+
Sbjct: 822 GPMGPRGFNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGIQGFNGTKGESGV 874
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 35.1 bits (77), Expect = 0.059
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGK-ISDGSRVSPLSPSIPCRPGGPMN 73
P TP P P PG P P P +P P +P P K I+ + P +P P P +
Sbjct: 203 PPTPPMPETPLPPGSPHIPPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIP 262
Query: 72 PA 67
PA
Sbjct: 263 PA 264
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/60 (36%), Positives = 25/60 (41%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
P P F P P P P P NP PT+P P +P +PSIP P P P
Sbjct: 297 PPAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNP-----SIPPAPPNPSIPPAPPNPSIP 351
Score = 31.5 bits (68), Expect = 0.73
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCP-GKISDGSRVSPLSPSIPCRPGGPMN 73
P P P P P P PS+ NP P P + + P SP+ P P P N
Sbjct: 218 PHIPPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPN-PSIPPAPPN 276
Query: 72 PA 67
P+
Sbjct: 277 PS 278
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMN 73
P P P P P P P NP P +P P + + PL+P P P P N
Sbjct: 245 PPMPETPLPPATPN-PFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPPAPPN 302
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/62 (37%), Positives = 24/62 (38%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
+ G GP G G G KGDT G GD G G G G G G G G G
Sbjct: 23 DTGATGPTGPTGPTGPKGDTGATGP--TGPKGDTGATGPAGPTGPTGPKGDTGATGPAGP 80
Query: 245 KG 250
G
Sbjct: 81 TG 82
>SB_47682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 34.7 bits (76), Expect = 0.078
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRPGGPMNP 70
PL P P P P P P G +P C G+ + PL+P +P P P+ P
Sbjct: 61 PLAPLMPLAPPMPLAPPVQQAPCGAGTMQAP-CAGQQMPLAPPMPLAPPVPLAPPMPLAP 119
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDI-LPGQPGDVGLPGFDGRDGV---AGIPGSFGRNGYLGV 244
G G+ GD G P D +P QPGD G+P G G+ AG G + GY G+
Sbjct: 416 GDTGIPTQAGDTGIPTQPGDTGIPTQPGDTGIPTQAGDTGIPTQAGDTGIPTQAGYTGI 474
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLP---GFDG---RDGVAGIPG 214
+ G PG GI GDT +P+ +P Q GD G+P G+ G R G GIP
Sbjct: 426 DTGIPTQPGDTGIPTQPGDTGIPTQAGDTGIPTQAGDTGIPTQAGYTGIPTRAGDTGIPT 485
Query: 215 SFGRNG 232
G G
Sbjct: 486 QAGDTG 491
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = +2
Query: 62 SEAGFIGPP---GLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSF 220
++AG G P G GI GDT +P+ +P Q GD G+P G G+ PG
Sbjct: 386 TQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQPGDTGIPTQPGDT 445
Query: 221 G 223
G
Sbjct: 446 G 446
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Frame = +2
Query: 62 SEAGFIGPP---GLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSF 220
++AG G P G GI GDT +P+ +P QPGD G+P G G+ G
Sbjct: 395 TQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQPGDTGIPTQPGDTGIPTQAGDT 454
Query: 221 G 223
G
Sbjct: 455 G 455
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = +2
Query: 62 SEAGFIGPP---GLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSF 220
++AG G P G GI GDT +P+ +P Q GD G+P G G+ G
Sbjct: 341 TQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDT 400
Query: 221 G 223
G
Sbjct: 401 G 401
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Frame = +2
Query: 62 SEAGFIGPP---GLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSF 220
++AG G P G GI GDT +P+ +P Q GD G+P G G+ G
Sbjct: 350 TQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDT 409
Query: 221 G 223
G
Sbjct: 410 G 410
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDI----LPGQPGDVGLPGFDGRDGVAGIPGSFG 223
+ G G GI GDT +P+ +P Q GD G+P G G+ G G
Sbjct: 336 DTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTGIPTQAGDTG 392
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGD--VGLPGFDGRDGVAGIPG 214
GPPG G G G +P PG PG +GLPG G G GIPG
Sbjct: 477 GPPGPAGPPGPSG-RYVPGP--PGPPGRTVIGLPGPPGPAGPRGIPG 520
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDG--VAGIPGSFGRNGYLGVKG 250
+G G QG+ GD+G P P P +PG G G V G+PG G G G+ G
Sbjct: 464 LGGRGPQGVRGDRGP---PGPAGPPGPSGRYVPGPPGPPGRTVIGLPGPPGPAGPRGIPG 520
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 LQGIEGDKGDTLLPSDILPGQP-GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
L+ +E + + S +P P G GLPG DG G AG+P GR+G +G G+
Sbjct: 102 LKALESSISENITISRPVPLCPQGPQGLPGRDGLPGKAGLP---GRDGAMGPPGR 153
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 101 IEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
++G KGD D+ G PG G PG GR G G PG G
Sbjct: 254 VDGQKGDR---GDM--GPPGHPGPPGVRGRRGKRGPPGPPG 289
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDG 196
G GPPG +G G+KGD +PG GDVG G G G
Sbjct: 125 GSQGPPGKRGPPGEKGD-----QGIPGVKGDVGPKGEKGDSG 161
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Frame = +2
Query: 68 AGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGL-------------PGFDGRDGVAGI 208
AG G PG G +GDKGDT+ I + L G G G G
Sbjct: 76 AGLKGDPGPVGPKGDKGDTVSARTISATLRDNFALGTVRDNFFILKVTQGSQGPPGKRGP 135
Query: 209 PGSFGRNGYLGVKG 250
PG G G GVKG
Sbjct: 136 PGEKGDQGIPGVKG 149
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFG 223
PG+ GD G+PG G G G G G
Sbjct: 136 PGEKGDQGIPGVKGDVGPKGEKGDSG 161
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G+ G G G DGRDG G PG G G G+ G
Sbjct: 11 GKDGKDGKDGIDGRDGRPGPPGRHGFPGQRGMPG 44
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/49 (40%), Positives = 21/49 (42%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
IG G G +G G D PG PG G PG G G G PG G
Sbjct: 10 IGKDGKDGKDGIDG-----RDGRPGPPGRHGFPGQRGMPGGTGPPGPPG 53
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +2
Query: 164 VGLPGFDGRDGV---AGIPGSFGRNGYLGVKG 250
+G G DG+DG+ G PG GR+G+ G +G
Sbjct: 10 IGKDGKDGKDGIDGRDGRPGPPGRHGFPGQRG 41
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSF 220
GPPG QG+ G +G +PG GD+G P G G G PGSF
Sbjct: 180 GPPGPQGLPGPQG--------VPGPAGDIG-PS--GSSGPQGPPGSF 215
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG GLPG G G AG G G +G G G
Sbjct: 180 GPPGPQGLPGPQGVPGPAGDIGPSGSSGPQGPPG 213
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 155 PGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PG G PG G G G+PG G G G G
Sbjct: 176 PGPQGPPGPQGLPGPQGVPGPAGDIGPSGSSG 207
>SB_24263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 195 PSRPSNPGNP-TSPGCP-GKISDGSRVSPLSPSIPCRPGGP 79
PSRP +PG P T P P G S+G + SP + PG P
Sbjct: 46 PSRPVSPGVPSTHPDSPPGDTSEGDKPSPEPGNRKAEPGSP 86
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G G PG QG +G KGD G+ G G G G G G G G +G +
Sbjct: 471 EQGLKGDPGPQGQQGPKGD--------QGEQGPKGSQGPQGPIGALGPRGPKGESGISAL 522
Query: 245 KG 250
+G
Sbjct: 523 RG 524
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 167 GLPGFDGRDGVAG--IPGSFGRNGYLGVKGQREK*DYKVLLENQALKGYKVSKVNEGLKV 340
G PG DG+DG G I G G GY G G+ K ++ L + K + + + L
Sbjct: 354 GAPGKDGKDGKDGESIVGPQGPPGYNGSDGKDGKDGIQIYLAKEEFKTEQAALATQ-LTT 412
Query: 341 SLDCMAASVVPVHQHLHLQYPNLEDFI 421
+ + + +SV + + L+D I
Sbjct: 413 ATNQLTSSVATLDSKVDSTSSRLQDMI 439
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
GP G QG++GD G GQ G G G G G G G G G G KG+
Sbjct: 467 GPQGEQGLKGDPGP--------QGQQGPKGDQGEQGPKGSQGPQGPIGALGPRGPKGE 516
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGV 199
G PG G +G G++++ G PG G G DG+DG+
Sbjct: 354 GAPGKDGKDGKDGESIVGPQ---GPPGYNGSDGKDGKDGI 390
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 158 GDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
G G PG G+ G G PG +G NG+ G
Sbjct: 81 GPPGYPGIPGQKGPTGPPGEYGYNGFPG 108
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGS-FGRNGYLGVKG 250
PG PG G G G G G PGS G++G+ G+ G
Sbjct: 86 PGIPGQKGPTGPPGEYGYNGFPGSRHGQSGFPGLHG 121
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/64 (37%), Positives = 28/64 (43%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGV 244
E G GPPG QG G KGD + + G G G G G G G+ G G Y
Sbjct: 121 EPGPQGPPGPQGPTGAKGDQ--GPEGIQGPQGIRGPEGPQGPQGPQGLEGKAGVVKYWDE 178
Query: 245 KGQR 256
K +R
Sbjct: 179 KHRR 182
>SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07)
Length = 198
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G G G +G++GDKGD + G GD G G G G G+ G+ G
Sbjct: 98 GLQGAQGARGLKGDKGDK--GDQGIQGLKGDKGDKGEKGDKGDQGLKGNQG 146
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVA 202
+ G G G+QG++GDKGD G+ GD G G G GV+
Sbjct: 111 DKGDKGDQGIQGLKGDKGD--------KGEKGDKGDQGLKGNQGVS 148
>SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSD----ILPGQPGDVGLPGFDGRDGVAGIPGS---FGRNGY 235
IG PG I GD G ++ D I+ G PGDV + G G + G PG G GY
Sbjct: 99 IGDPGYVMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGY 158
Query: 236 LGVKG 250
+ + G
Sbjct: 159 VMIIG 163
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSD----ILPGQPGDVGLPGFDGRDGVAGIPGS---FGRNGY 235
IG PG I GD G ++ D I+ G PGDV + G G + G PG G GY
Sbjct: 45 IGDPGHVMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGY 104
Query: 236 LGVKG 250
+ + G
Sbjct: 105 VMIIG 109
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/57 (38%), Positives = 24/57 (42%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
G PG++G G KGD I G G G G G G G PG G G G G
Sbjct: 1 GYPGIEGPPGPKGDR---GPI--GPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDG 52
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPS-DILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
G GPPG +G G G PG G G PG G +G G GS G
Sbjct: 4 GIEGPPGPKGDRGPIGPRGPQGYQGAPGPKGTGGFPGEKGDEGPRGEDGSAG 55
>SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35)
Length = 374
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 140 ILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
I+ G+ G G PG +GRDG G PG G Y
Sbjct: 11 IIIGRDGKDGKPGLNGRDGRDGNPGRVGGEWY 42
>SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)
Length = 188
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSD----ILPGQPGDVGLPGFDGRDGVAGIPGS---FGRNGY 235
IG PG I GD G ++ D I+ G PGDV + G G + G PG G GY
Sbjct: 93 IGDPGYVMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGY 152
Query: 236 LGVKG 250
+ + G
Sbjct: 153 VMIIG 157
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 77 IGPPGLQGIEGDKGDTLLPSD----ILPGQPGDVGLPGFDGRDGVAGIPGS---FGRNGY 235
IG PG I GD G ++ D I+ G PGDV + G G + G PG G GY
Sbjct: 39 IGDPGHVMIIGDPGYGMIIGDPGHVIIIGDPGDVMIIGDPGHVMIIGDPGHMMIIGDPGY 98
Query: 236 LGVKG 250
+ + G
Sbjct: 99 VMIIG 103
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDG 187
GPPG G +G KGD P + G+ GD G+PG G
Sbjct: 122 GPPGPPGPQGPKGD---PG--VRGEKGDRGIPGVGG 152
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPG-FDGRDGVAGIPGS 217
E G +GP G QG +G KG+ P PG PG+ G G F G G G G+
Sbjct: 41 ELGKVGPSGPQGRKGFKGE---PGP--PGLPGEQGPQGKFGGLLGDGGFGGA 87
>SB_33143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPGNPTSP 157
P P P P P TP+ P++P +PTSP
Sbjct: 128 PTSPTSPTTPTSPRTPTSPTSPISPTSP 155
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCP 148
P P P TP+ P P +PTSP P
Sbjct: 128 PTSPTSPTTPTSPRTPTSPTSPISP 152
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGY 235
GL G+ G G PG PGD+G PG +G G G P +F Y
Sbjct: 603 GLPGVNGTSGP--------PGPPGDMGPPGLNGTRGPPG-PANFSACEY 642
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 167 GLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
GLPG +G G G PG G G G +G
Sbjct: 603 GLPGVNGTSGPPGPPGDMGPPGLNGTRG 630
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/51 (41%), Positives = 23/51 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
GF+GP G G G +G P PG GD G G G G G PG G
Sbjct: 236 GFMGPRGHNGTAGQQG----PQGP-PGPKGDTGPAGPGGPRGNQGPPGPSG 281
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 149 GQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G PG G G G G G G G G+ G GQ+
Sbjct: 215 GPPGPSGPQGQQGPPGTKGPQGFMGPRGHNGTAGQQ 250
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
GP GL+G G GD P I PGD+G G G G G PG G
Sbjct: 174 GPQGLRGPRGYSGDRG-PQGI----PGDMGPRGAKGDKGDRGKPGETG 216
>SB_29112| Best HMM Match : Mucin (HMM E-Value=1.7)
Length = 493
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 240 PR*PFRPKDPGIPATPSRPSNPG---NPTSPGC-PGKISDGSRVSPLSPSIPCRPGGPMN 73
P P P PAT +P+NPG PT+PG P ++ G+ P + + + P
Sbjct: 257 PTNPATHPKPTNPATHPKPTNPGTNPKPTNPGTHPKPMNPGTHPKPTNSATDPKSTNPGT 316
Query: 72 P 70
P
Sbjct: 317 P 317
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGN---PTSPGC-PGKISDGSRVSPLSPSIPCRP 88
PK P PAT +P+NP PT+PG P + G+ P++P +P
Sbjct: 255 PK-PTNPATHPKPTNPATHPKPTNPGTNPKPTNPGTHPKPMNPGTHPKP 302
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +2
Query: 89 GLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPG 214
G G +GD+G G PG GLPG G G+ G PG
Sbjct: 485 GAAGPKGDRGPA--------GPPGPRGLPGAQGPQGIQGTPG 518
>SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84)
Length = 649
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSR-VSPLSPSIPCRPGGPMNP 70
P RP +PATP RPS + T + R + SP+ R GP++P
Sbjct: 323 PLRPSRISLPATPHRPSRSESDTDLQTSNIVKGLLRSMKGKSPTSDKRDSGPLSP 377
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIP--CRPGGPMNP 70
P +P I ATP + PG T+ PG S SP IP P GP P
Sbjct: 314 PTQPASTTIEATPQPETQPGASTAK-APGSTEPTVSQSASSPKIPMSTSPTGPSQP 368
>SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04)
Length = 60
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 LPGQPGDVGLPGFDGRDGVAGIPG--SFGRNGYLGVKGQR 256
+ G+PG G GF G+ G G+ G G G G KG R
Sbjct: 5 IDGRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDR 44
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 158 GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G +G PG G G+ G PG G G LG G +
Sbjct: 172 GPMGAPGVQGIQGMRGPPGPPGPQGSLGPAGAK 204
>SB_37097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 222 PKDPGIPATPSRP-SNPGNPTSP 157
P+ PGIP+TP++P + PG P P
Sbjct: 274 PEFPGIPSTPTQPRTQPGRPQLP 296
>SB_36020| Best HMM Match : Collagen (HMM E-Value=0.31)
Length = 212
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 80 GPPGLQGIEGDKG-DTLLPSDILPGQP---GDVGLPGFDGRDGVAGIPGSFGRNGYLGVK 247
G ++G E KG +T+ + + G+ G+ + G + GV I G G +K
Sbjct: 35 GEEAIKGEEAIKGVETIKGEEAIKGEETIKGEEAIKGEEAIKGVEAIKGEEAIKGEEAIK 94
Query: 248 GQREK*DYKVLLENQALKGYKVSKVNEGLK 337
G+ + + +A+KG + K E +K
Sbjct: 95 GEESIKGEETIKGEEAIKGEEAIKGEETIK 124
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGDTLLPSD-ILPGQP---GDVGLPGFDGRDGVAGIPGSFGRNG 232
E G ++G+E KG+ + + + G+ G+ + G + G I G G
Sbjct: 36 EEAIKGEEAIKGVETIKGEEAIKGEETIKGEEAIKGEEAIKGVEAIKGEEAIKGEEAIKG 95
Query: 233 YLGVKGQREK*DYKVLLENQALKGYKVSKVNEGLK 337
+KG+ + + +A+KG + K E +K
Sbjct: 96 EESIKGEETIKGEEAIKGEEAIKGEETIKGEEAIK 130
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +2
Query: 65 EAGFIGPPGLQGIEGDKGD-TLLPSDILPGQP---GDVGLPGFDGRDGVAGIPGSFGRNG 232
E G ++G E KG+ T+ + + G+ G+ + G + GV I G G
Sbjct: 84 EEAIKGEEAIKGEESIKGEETIKGEEAIKGEEAIKGEETIKGEEAIKGVETIKGEEAIKG 143
Query: 233 YLGVKGQREK*DYKVLLENQALKGYKVSKVNEGLK 337
+KG+ + + +A+KG + K E +K
Sbjct: 144 EEAIKGEETIKGEEAIKGEEAIKGEETIKGEEAIK 178
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 158 GDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
G +G PG G G+ G PG G G LG G +
Sbjct: 154 GPMGAPGVQGIQGMRGPPGPPGPQGSLGPAGAK 186
>SB_35408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 216 DPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCR 91
DP P P P+ P +PT P P +D + P P++P R
Sbjct: 24 DPSDPTMPDDPTMPNDPTMPDDPTMPNDPT--MPDDPTMPTR 63
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 143 LPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLG 241
+PG+ GD G PG G G G G G G G
Sbjct: 2 IPGRAGDAGKPGEKGSRGPPGPAGPIGNPGKPG 34
>SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078)
Length = 102
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
PG G G PG GR G G PG G +G V+ ++
Sbjct: 9 PGLRGPKGAPGGRGRIGARGPPGPRGSSGVQYVRWEK 45
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPG 178
GPPG G +G KGD P + G+ GD G+PG
Sbjct: 122 GPPGPPGPQGPKGD---PG--VRGEKGDRGIPG 149
>SB_34932| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.38)
Length = 414
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPG 154
P RP+ P +TP+ P++ G PTS G
Sbjct: 205 PARPQGPARASTPNTPTSMGLPTSAG 230
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSN--PGNPTSPGCPGK-ISDGSRVSPLSP 106
P RP +P S+PSN P NPT G+ +SD S P SP
Sbjct: 848 PLRPTNPTPAHAASKPSNPRPSNPTPKHAMGEGVSDNS-AEPPSP 891
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGI 208
G +GP G G +G KGD + I G G G G G GV G+
Sbjct: 38 GPMGPRGYNGSQGPKGDQGVQGPI--GPQGYNGTQGPKGDQGVKGV 81
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKG 250
PG+ G VG PG G G+ G G G G G G
Sbjct: 66 PGRRGPVGPPGVPGPRGMQGEEGPAGNKGPQGDPG 100
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPG 154
P PG PAT + PS N T PG
Sbjct: 514 PAQPGYPATSTMPSGAPNTTPPG 536
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGS 217
G GP G +G +GD+GD + G GD G G G G G+ S
Sbjct: 249 GLRGPKGDKGDKGDRGD-----QGIQGFKGDKGDKGDQGAQGAKGLMNS 292
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNG 232
PG G G PG GR G G PG G +G
Sbjct: 85 PGLRGPKGAPGGRGRIGARGPPGPRGSSG 113
>SB_6604| Best HMM Match : Extensin_2 (HMM E-Value=0.27)
Length = 492
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 219 KDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSI 100
K+P PATP RP + N P PG S+ + SPS+
Sbjct: 57 KEPQPPATPVRPDSVSNILVPSTPGIYSNQGLLE--SPSL 94
>SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11)
Length = 502
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 492 FVNSYNANGKAHGQDLGAPGSCLRKFSTMPYLFCNLNNVCD 614
F+ SY+ G A+ G P +C R + L C+L+ CD
Sbjct: 116 FIASYSY-GAANTSQEGVPTTCHRDSMRLAVLVCSLSRTCD 155
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = -2
Query: 285 SRRTL*SYFSLCPLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSP 106
S +L SY + P P +P TP +PS NP P P S + + P
Sbjct: 1245 SPSSLISYKPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPS-PSTTST-TPIKPSPS 1302
Query: 105 SIPCRPGGPMNP 70
+ P +P P
Sbjct: 1303 TTPIKPSPSTTP 1314
>SB_33012| Best HMM Match : DUF1388 (HMM E-Value=2.6e-18)
Length = 212
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPG 154
P R K PG TP R PG +PG
Sbjct: 113 PGRDKTPGRDKTPGRDKTPGRDKTPG 138
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPG 154
P R K PG TP R PG +PG
Sbjct: 155 PGRDKTPGRDKTPGRDKTPGRDKTPG 180
>SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 62 SEAGFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGI--PGSFGRNGY 235
S+ GF + I G L+ DI G V G + DG+ G+ GS +G
Sbjct: 108 SQDGFFVENKEKLITGAVSALLMQEDIEDYDIGGVDADGGEYEDGIGGVDADGSEYEDGI 167
Query: 236 LGVKGQREK*DYKVLLENQALKG 304
GV + +Y V EN+ + G
Sbjct: 168 GGVDADGGEYEYSVTGENEDVNG 190
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 146 PGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQR 256
PG G G G G G+ G PG+ G +GVK R
Sbjct: 241 PGAKGAQGAQGPKGNPGLRGRPGATGPRPTVGVKYTR 277
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 71 GFIGPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPG 214
G +GP G G +G KGD G G VG G++G G G G
Sbjct: 365 GPMGPRGYNGSQGPKGD--------QGVQGPVGPQGYNGTQGSKGDQG 404
>SB_51279| Best HMM Match : Filament (HMM E-Value=0.092)
Length = 778
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCRP 88
P P DP IP S PSN SP P ++ D +VS LS S P
Sbjct: 689 PCSPNDPRIPRVRSSPSNI-LQYSPLPPIRMPDLRQVSRLSKSAKSYP 735
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 231 PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDG-SRVSPLSPSIP 97
P P D P P P+ P P P PG D SP P +P
Sbjct: 457 PPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLP 502
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSPSIPCR--PGGPM 76
PL P P P P +RP+ P PT+ + + S L P IP P P+
Sbjct: 913 PLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPL 972
Query: 75 NP 70
P
Sbjct: 973 PP 974
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 222 PKDPGIPATPSRPSNPGNPTSPGCP-GKISDGSRVSPLSPSIPCRPGGP-MNP 70
PK P P++ RP+NP + P P + S P +PS +P P NP
Sbjct: 590 PK-PNNPSSNPRPNNPSSNPKPNNPXXXXNPSSNPKPNNPSSNPKPNNPSSNP 641
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 212 GSFGRNGYL-GVKGQREK*DYKVLLENQALKGYKVSKVNEGLKVSLDCMAASVVPVHQHL 388
G G+ G + GVKG ++ V+ N +LKG V ++ KV L C+ A+ +
Sbjct: 168 GGIGKVGRVTGVKGWDKESYRSVVSVNWSLKGENVYRLGHKGKVDLTCVNATPGGYYYRE 227
Query: 389 HL 394
HL
Sbjct: 228 HL 229
>SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17)
Length = 714
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 207 IPATPSRPSNPGNPTSPGCPGKISDGSRVSPLSP 106
+PATPS P +P T PG + S+ +SP
Sbjct: 495 LPATPSTPLSPNTATPLTSPGPQTTPSQFVKISP 528
>SB_38421| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 1144
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 122 TLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFGRNGYLGVKGQ 253
TL PS PG+ V +P +GV +PGS YL + GQ
Sbjct: 29 TLNPSTASPGETLYVVVPKLS--EGVTLVPGSLRVGFYLSISGQ 70
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Frame = -2
Query: 228 FRPKDPGI-PATPS--------RPSNPGNPTSPGCPGKISDGSRVSPLSPSI-PCRPG-G 82
F P P + PA+PS PS+P + SP P SP SPS P P
Sbjct: 419 FMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYS 478
Query: 81 PMNPA 67
P +P+
Sbjct: 479 PTSPS 483
>SB_4764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 225 RPKDPGIPATPSRPSNPGNP 166
R P IP+TPS PS P P
Sbjct: 99 RTMSPDIPSTPSSPSPPSEP 118
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 80 GPPGLQGIEGDKGDTLLPSDILPGQPGDVGLPGFDGRDGVAGIPGSFG 223
GP G +G G G L G G G+ G G +G AG+PG G
Sbjct: 419 GPMGPRGYNGSIGPQGLAG--AEGHNGTQGIQGPMGVNGSAGVPGPPG 464
>SB_41085| Best HMM Match : Auxin_repressed (HMM E-Value=9)
Length = 206
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 231 PFRPKDPG-IPATPSRPSNPGNPTSP 157
PF P G + A+PS P+NPG +P
Sbjct: 84 PFTPPSAGTVGASPSNPANPGTIYNP 109
>SB_13632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Frame = -2
Query: 249 PLTPR*PFRPKDPGIPATPSRPSNPG---------NPTSPGCPGKISDGSRV-SPLSPSI 100
PLTPR P R + TP P PG P +P PG+ + ++ +PL+P
Sbjct: 117 PLTPRGPGRTLNHEKLTTPLTPKGPGRTLNHEKLTTPLTPRGPGRTLNHEKLTTPLTPRG 176
Query: 99 PCR 91
P R
Sbjct: 177 PGR 179
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 204 PATPSRPSNPGNPTSP 157
P P RPS+PGNP P
Sbjct: 73 PRGPGRPSSPGNPPRP 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,291,729
Number of Sequences: 59808
Number of extensions: 507310
Number of successful extensions: 4376
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 1934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3409
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -