Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20763
(794 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18511| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_30293| Best HMM Match : Rho_N (HMM E-Value=0.0017) 31 1.4
SB_56519| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_47068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_28097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_18569| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 2.5
SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017) 30 2.5
SB_55735| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5) 29 3.3
SB_41355| Best HMM Match : Rho_N (HMM E-Value=0.0007) 29 3.3
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.3
SB_17800| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032) 29 3.3
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10256| Best HMM Match : RasGEF (HMM E-Value=1.8e-34) 29 3.3
SB_52840| Best HMM Match : DUF1363 (HMM E-Value=8.4) 29 3.3
SB_48244| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_42952| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5) 29 3.3
SB_31577| Best HMM Match : Rho_N (HMM E-Value=0.0007) 29 3.3
SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_31523| Best HMM Match : Rho_N (HMM E-Value=0.0007) 29 3.3
SB_30611| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5) 29 3.3
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 29 3.3
SB_19489| Best HMM Match : TP2 (HMM E-Value=0.58) 29 5.7
SB_159| Best HMM Match : TP2 (HMM E-Value=0.58) 29 5.7
SB_14163| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 29 5.7
>SB_18511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = -3
Query: 537 IRNIFVLFIYYNLLFFFKLISKTQCGYVT*VIIILNIAVLSEIYRKILYFHMATFGSS*T 358
+R++ LF++ + + F + GY+ +I+ + +L +Y ILYF +
Sbjct: 88 VRHVIALFVFVTITWLFAGLHLAY-GYLWMIIVFAILDILLGLYVFILYFILRNQVRG-V 145
Query: 357 RKQTYVIQAKP 325
KQTY Q +P
Sbjct: 146 FKQTYAFQGEP 156
>SB_30293| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 1078
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + +SD EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 545 HSRLNDSDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 596
>SB_56519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 30 ALQLMAQGLYNHSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFS 209
A QL + ++ HS + ++D EE ++ RR W+ FG T+ + + + ++ + F
Sbjct: 79 ATQLPQREVF-HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFE 137
Query: 210 NFK 218
NF+
Sbjct: 138 NFR 140
>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 709 HSKLNDTDISEEDHLHARRVWEAFGMGTMRDYHNLYLESDVLLLADVFENFR 760
>SB_47068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 42 HSKLNDTDISEEDHLHARRVWEAFGMGTMRDYHNLYLESDVLLLADVFENFR 93
>SB_28097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 89 HSKLNDTDISEEDHLHARRVWEAFGMGTMRDYHNLYLESDVLLLADVFENFR 140
>SB_18569| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 708
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 545 HSKLNDTDISEEDHLHARRVWEAFGMGTMRDYHNLYLESDVLLLADVFENFR 596
>SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 1064
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 30 ALQLMAQGLYNHSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFS 209
A QL + + HS + ++D EE ++ RR W+ FG T+ + + + ++ + F
Sbjct: 694 ATQLQQREAF-HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFE 752
Query: 210 NFK 218
NF+
Sbjct: 753 NFR 755
>SB_55735| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5)
Length = 349
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 186 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 237
>SB_41355| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 992
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 769 HSKLNDTDVSEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 820
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 1212 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 1263
>SB_17800| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032)
Length = 644
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 481 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 532
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 844 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 895
>SB_10256| Best HMM Match : RasGEF (HMM E-Value=1.8e-34)
Length = 792
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 346 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 397
>SB_52840| Best HMM Match : DUF1363 (HMM E-Value=8.4)
Length = 170
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 89 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 140
>SB_48244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 89 HSKLNDTDISEEDHLHVRRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 140
>SB_42952| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5)
Length = 349
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 186 HSKLNDTDVSEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 237
>SB_31577| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 871
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 769 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 820
>SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1248
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 30 ALQLMAQGLYNHSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFS 209
A QL + ++ HS + ++D EE ++ RR W+ FG T+ + + + ++ + F
Sbjct: 759 ATQLPQREVF-HSKLNDTDISEEDHLHARRVWEFFGMGTMRDYHNLYLESDVLLLADVFE 817
Query: 210 NFK 218
NF+
Sbjct: 818 NFR 820
>SB_31523| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1104
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 762 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 813
>SB_30611| Best HMM Match : Endonuclease_7 (HMM E-Value=0.5)
Length = 455
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 186 HSKLNDTDVSEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 237
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 42 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 93
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 641 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLADVFENFR 692
>SB_19489| Best HMM Match : TP2 (HMM E-Value=0.58)
Length = 429
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 403 KNSVFSYGNIWK*LNPKTNLRNSGKTSMTYPPKICHRKTCSI 278
KN ++S+G++W P TN +N TS P + RKT ++
Sbjct: 84 KNELYSHGHVWV---PATNSQNIRGTSFLPPIESRSRKTGNV 122
>SB_159| Best HMM Match : TP2 (HMM E-Value=0.58)
Length = 429
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 403 KNSVFSYGNIWK*LNPKTNLRNSGKTSMTYPPKICHRKTCSI 278
KN ++S+G++W P TN +N TS P + RKT ++
Sbjct: 84 KNELYSHGHVWV---PATNSQNIRGTSFLPPIESRSRKTGNV 122
>SB_14163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 6 ASGQRNPLALQLMAQGLYN-HSTVTESDDEEEINV 107
A+G R LAL L A+ LYN T+ E+DD + +N+
Sbjct: 59 ANGFRRILALTLEAKLLYNGMRTIFEADDTDAVNL 93
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 63 HSTVTESDDEEEINVT*RRWWDCFGDVTITVFVKFQIWNFLVSIVFTFSNFK 218
HS + ++D EE ++ RR W+ FG T+ + + + ++ + F NF+
Sbjct: 893 HSKLNDTDISEEDHLHARRVWEVFGMGTMRDYHNLYLESDVLLLSDVFENFR 944
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,586,889
Number of Sequences: 59808
Number of extensions: 427840
Number of successful extensions: 922
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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