Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20759
(794 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein. 60 3e-09
AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p pro... 60 3e-09
AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB... 60 3e-09
BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p pro... 52 7e-07
AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC... 52 7e-07
AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA... 52 7e-07
AE014296-1007|AAF50746.2| 185|Drosophila melanogaster CG33718-P... 29 7.3
AE014296-1006|AAN12113.2| 194|Drosophila melanogaster CG33718-P... 29 7.3
>S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein.
Length = 608
Score = 60.1 bits (139), Expect = 3e-09
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +3
Query: 117 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVV 251
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTII 52
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 254 SSFILGTFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPL 412
S+FILG+FILASS++ A++SC Q++ LD++L++EL LE L EPL
Sbjct: 54 SAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 673 KLPIQFDLDELAGAFLANNQKRPYELRVER 762
K+P++ DL +LA A L NN+K VER
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVER 189
>AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p
protein.
Length = 608
Score = 60.1 bits (139), Expect = 3e-09
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +3
Query: 117 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVV 251
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTII 52
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 254 SSFILGTFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPL 412
S+FILG+FILASS++ A++SC Q++ LD++L++EL LE L EPL
Sbjct: 54 SAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 673 KLPIQFDLDELAGAFLANNQKRPYELRVER 762
K+P++ DL +LA A L NN+K VER
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVER 189
>AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB,
isoform B protein.
Length = 608
Score = 60.1 bits (139), Expect = 3e-09
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +3
Query: 117 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVV 251
SMAT+ MKP+Y SEVYST SEPPPAY+ R + SV+IAKI A T++
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTII 52
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 254 SSFILGTFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPL 412
S+FILG+FILASS++ A++SC Q++ LD++L++EL LE L EPL
Sbjct: 54 SAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 106
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 673 KLPIQFDLDELAGAFLANNQKRPYELRVER 762
K+P++ DL +LA A L NN+K VER
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVER 189
>BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p
protein.
Length = 617
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 254 SSFILGTFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPL 412
S+FILG+FILASS++ A++SC Q++ LD++L++EL LE L EPL
Sbjct: 63 SAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 115
Score = 49.6 bits (113), Expect = 5e-06
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 9/54 (16%)
Frame = +3
Query: 117 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVV 251
SMAT+ MKP+Y SEVYST SEPPP + H R + SV+IAKI A T++
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTII 61
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 673 KLPIQFDLDELAGAFLANNQKRPYELRVER 762
K+P++ DL +LA A L NN+K VER
Sbjct: 169 KMPLELDLSDLAAAILRNNRKSRMNCVVER 198
>AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC,
isoform C protein.
Length = 625
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 254 SSFILGTFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPL 412
S+FILG+FILASS++ A++SC Q++ LD++L++EL LE L EPL
Sbjct: 71 SAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 123
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 673 KLPIQFDLDELAGAFLANNQKRPYELRVER 762
K+P++ DL +LA A L NN+K VER
Sbjct: 177 KMPLELDLSDLAAAILRNNKKSRMNCVVER 206
>AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA,
isoform A protein.
Length = 617
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 254 SSFILGTFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPL 412
S+FILG+FILASS++ A++SC Q++ LD++L++EL LE L EPL
Sbjct: 63 SAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLETLQQVGKELPRAEPL 115
Score = 49.6 bits (113), Expect = 5e-06
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 9/54 (16%)
Frame = +3
Query: 117 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVV 251
SMAT+ MKP+Y SEVYST SEPPP + H R + SV+IAKI A T++
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTII 61
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 673 KLPIQFDLDELAGAFLANNQKRPYELRVER 762
K+P++ DL +LA A L NN+K VER
Sbjct: 169 KMPLELDLSDLAAAILRNNKKSRMNCVVER 198
>AE014296-1007|AAF50746.2| 185|Drosophila melanogaster CG33718-PA,
isoform A protein.
Length = 185
Score = 29.1 bits (62), Expect = 7.3
Identities = 23/100 (23%), Positives = 43/100 (43%)
Frame = +3
Query: 159 EVYSTSEPPPAYRHRVSTSVQIAKIAALTVVAPPSSWEPLYWLRVG*QLVHHAIS*SSWM 338
EVY +S + + +++ AK+ + + P E W+ VG L H + ++ +
Sbjct: 32 EVYDSSNAHERFEAELDKALE-AKLDFIVIEPPRLGDETGRWIWVGNCL--HKTAVATGV 88
Query: 339 QCSTKNSLWKAEPTEMMPW*RMSLCH*QMPTLCMEYRPCC 458
+ LW+ P P +S+ + T+ Y PCC
Sbjct: 89 VSLVASLLWRDRPIIAAPACALSIFCTGLYTVSWNYDPCC 128
>AE014296-1006|AAN12113.2| 194|Drosophila melanogaster CG33718-PB,
isoform B protein.
Length = 194
Score = 29.1 bits (62), Expect = 7.3
Identities = 23/100 (23%), Positives = 43/100 (43%)
Frame = +3
Query: 159 EVYSTSEPPPAYRHRVSTSVQIAKIAALTVVAPPSSWEPLYWLRVG*QLVHHAIS*SSWM 338
EVY +S + + +++ AK+ + + P E W+ VG L H + ++ +
Sbjct: 32 EVYDSSNAHERFEAELDKALE-AKLDFIVIEPPRLGDETGRWIWVGNCL--HKTAVATGV 88
Query: 339 QCSTKNSLWKAEPTEMMPW*RMSLCH*QMPTLCMEYRPCC 458
+ LW+ P P +S+ + T+ Y PCC
Sbjct: 89 VSLVASLLWRDRPIIAAPACALSIFCTGLYTVSWNYDPCC 128
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,730,586
Number of Sequences: 53049
Number of extensions: 749692
Number of successful extensions: 2745
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2741
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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