Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20759
(794 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62010.1 68416.m06964 expressed protein 31 0.67
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 31 0.88
At2g11620.1 68415.m01249 hypothetical protein 31 1.2
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 29 3.6
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 29 3.6
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 29 4.7
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 29 4.7
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 29 4.7
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P... 28 6.2
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 28 6.2
At5g55690.1 68418.m06943 MADS-box protein (AGL47) 28 8.2
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 28 8.2
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 320 QLEQLDAMLDQELALEGRAYGNDALVADE 406
++EQ++A L +++ +E YGN LV DE
Sbjct: 124 RVEQMEARLKEDILMEASRYGNKILVTDE 152
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 272 TFILASSWVAARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHAL 436
T ++ V + S+ HQ E L ++ A G A+GN+ + + P P + H +
Sbjct: 66 TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRI 120
>At2g11620.1 68415.m01249 hypothetical protein
Length = 491
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 90 VMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVS 209
V+ + + M + MKPE PP ++Y +P P + S
Sbjct: 253 VLRYDGNNNGMQGVLMKPEKPPQDLYGQCQPQPQIQRNFS 292
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1051 VVYAPMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLDRAMC 1109
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1032 VVYAPMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLDRAMC 1090
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 892 VVYAPMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 950
>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886
Length = 1285
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1143 VVYAPMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1201
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1003 VVFAPMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1061
>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1314
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1056 VVYDPMNWKGEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1114
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1030 VVYAPMNWKSEHWVALGINLNERLITVYDALISYTRESAVKARMTPICEMMPYLVRAMC 1088
>At5g55690.1 68418.m06943 MADS-box protein (AGL47)
Length = 277
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 554 TNCRKLTTIRMTHQTRVMRVLSPTVLLKRTTNLKRLDRCS-NCLFSL 691
++C K T++ + +V PT+ K T K+LD+CS N L+++
Sbjct: 84 SSCTKTYTVQECLEKNNTKVEKPTIATKYPTWDKKLDQCSLNDLYAV 130
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 VVAPPSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 413
VV P +W+ +W +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1063 VVYAPMNWKSEHWAALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1121
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,935,962
Number of Sequences: 28952
Number of extensions: 347467
Number of successful extensions: 1492
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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