Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20758
         (721 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4WB38 Cluster: MFS multidrug transporter, putative; n=...    36   1.3  
UniRef50_A5KC21 Cluster: Putative uncharacterized protein; n=1; ...    34   4.1  

>UniRef50_Q4WB38 Cluster: MFS multidrug transporter, putative; n=5;
           Trichocomaceae|Rep: MFS multidrug transporter, putative
           - Aspergillus fumigatus (Sartorya fumigata)
          Length = 585

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = -2

Query: 576 WVRALIVTAYSSLSACFLLPCAS*FLCGRDAALSRYV--GGVPVC-CVLIIFLYAQDIEA 406
           W  A ++  +    A FL+  A     G+DA +  +V    +  C CV+I+FL+   I A
Sbjct: 300 WDSATVIGLFCGAGATFLVFTAWEHRMGKDAMIPFHVIRNRIVSCSCVVIMFLFGMTITA 359

Query: 405 IYFLNPLYVYAAK 367
            Y+L P+Y  A +
Sbjct: 360 SYYL-PIYFQAVR 371


>UniRef50_A5KC21 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 117

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
 Frame = +3

Query: 609 QFSLLTRCRPLHRRSTVHKKRIPH--QKPYQK 698
           Q +L  +  PLHR+S +H+KR PH  +KP++K
Sbjct: 54  QKNLHKKINPLHRKSLLHRKRKPHRKRKPHRK 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,829,454
Number of Sequences: 1657284
Number of extensions: 13472266
Number of successful extensions: 29662
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29655
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)