Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20758
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.47 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 379 YIERIEEINRFDILCIQEYYKYTANRH 459
           +IE I ++  FD+ C+  Y K  +  H
Sbjct: 465 FIEFIRKVLEFDVKCVSNYTKQQSKIH 491


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 717 CSIMFKVFGMVFDGE 673
           CS+ F +FG ++D E
Sbjct: 255 CSLYFCIFGYIYDDE 269


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 717 CSIMFKVFGMVFDGE 673
           CS+ F +FG ++D E
Sbjct: 80  CSLYFCIFGYIYDDE 94


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 274 ADTESTNFQKAHRATLLRIISYFKKLEPLNSD 179
           A++++ NF  +    LLR +S F+    LN++
Sbjct: 384 AESQTINFMFSFGFILLRFLSVFESCTRLNNE 415


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 152 VHKTDTGTTSYIRNLF*LIQNKH 84
           VH T+ GT   +R L    QNK+
Sbjct: 111 VHGTNNGTNKNMRRLSTTTQNKN 133


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 478  ISLRGRCACLLCTY 437
            ISL G   C+LCT+
Sbjct: 1111 ISLAGLFKCMLCTH 1124


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 478  ISLRGRCACLLCTY 437
            ISL G   C+LCT+
Sbjct: 1111 ISLAGLFKCMLCTH 1124


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 478  ISLRGRCACLLCTY 437
            ISL G   C+LCT+
Sbjct: 1111 ISLAGLFKCMLCTH 1124


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 478  ISLRGRCACLLCTY 437
            ISL G   C+LCT+
Sbjct: 1111 ISLAGLFKCMLCTH 1124


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 453 QAHRPRSEITPH 488
           Q++RP   ITPH
Sbjct: 246 QSYRPTGNITPH 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,707
Number of Sequences: 336
Number of extensions: 3637
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)