Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20758
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   2.4  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   5.4  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   9.5  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 569 RTHHTLTCSADTCSVLIVDKMSPAASTK 652
           +T  T TCSAD    L   +MSP AS +
Sbjct: 332 KTEKTSTCSADDIIELQDIRMSPIASLR 359


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 542 VYRHVSCYRALVNFSVDGMRRYLATWAVCLFAV 444
           +Y HV+C RA  N+ V    +Y+      L AV
Sbjct: 900 IYGHVTCLRAHRNYMVQTEDQYIFIHDALLEAV 932


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 532 MFPVTVR*LISLWTGCGVISLRG 464
           +FPV +   I +WT CGV++  G
Sbjct: 247 LFPVLLTIAI-MWTVCGVLTATG 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,925
Number of Sequences: 2352
Number of extensions: 15076
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)