Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20757
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.003
UniRef50_Q5BSC7 Cluster: SJCHGC05055 protein; n=1; Schistosoma j...    37   0.63 
UniRef50_Q9N4K0 Cluster: UPF0327 protein F54A3.5; n=2; Caenorhab...    35   1.9  
UniRef50_Q5TGZ0 Cluster: UPF0327 protein C1orf151; n=12; Eutheri...    33   5.8  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 667 AKFRLLIWVDEPTAHLVLNGYWSP 738
           ++F LL WVDE TAHLVL+GYWSP
Sbjct: 152 SRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q5BSC7 Cluster: SJCHGC05055 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05055 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 91

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 133 KIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPIIAGMG 252
           K+D C++D ++KT             F KRR WP+I G G
Sbjct: 14  KLDRCISDTLIKTGAGLFGGIIFSVVFAKRRPWPLIFGTG 53


>UniRef50_Q9N4K0 Cluster: UPF0327 protein F54A3.5; n=2;
           Caenorhabditis|Rep: UPF0327 protein F54A3.5 -
           Caenorhabditis elegans
          Length = 105

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +1

Query: 106 NNTTDDYSAKIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPIIAGMGV 255
           + + D+   KID C  D ++K              F K R WPI  G GV
Sbjct: 11  SRSEDEVGQKIDRCFADSLLKVTGGVAIGIVASVAFFKSRSWPIWFGSGV 60


>UniRef50_Q5TGZ0 Cluster: UPF0327 protein C1orf151; n=12;
           Eutheria|Rep: UPF0327 protein C1orf151 - Homo sapiens
           (Human)
          Length = 78

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +1

Query: 133 KIDMCLTDGIVKTXXXXXXXXXXXXXFLKRRRWPIIAGMGV 255
           K D CL D +VK              F KRR WP+  G G+
Sbjct: 9   KWDRCLADAVVKIGTGFGLGIVFSLTFFKRRMWPLAFGSGM 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,640,138
Number of Sequences: 1657284
Number of extensions: 11421618
Number of successful extensions: 22854
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22851
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)