Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20756
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 56 2e-08
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 29 3.2
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical ... 28 5.6
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = +1
Query: 268 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 447
+LK ET EKN LP K+ + EK+ + ++ IE+FD TKL T EK LP+ D I+QE
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 448 K 450
K
Sbjct: 83 K 83
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +1
Query: 238 IRRYREFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNS 417
I FDS++L T +EK LP D I+ EK+ + + I NF LK TET EKN
Sbjct: 51 IHEIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNV 110
Query: 418 LPTKDVIEQEKS 453
LP+ + +EK+
Sbjct: 111 LPSPTDVAREKT 122
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 131 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIES 256
++E F+++ L EKIVLPSA+D+ EK L D I +
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINN 94
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE 253
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIE 55
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 86 PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKT 226
PS D+ K +L ++ F + L+ +T EK VLPS DVA EKT
Sbjct: 74 PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 250 REFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTK 429
R+ DSS++K ++T NP D I +++ + + F K C LP
Sbjct: 550 RKLDSSKVKPSQTSSPNPY--TDTILSDEHLTQLARDLSKFKSNLAK----CFGTKLPAD 603
Query: 430 DVIEQEK 450
DV EK
Sbjct: 604 DVTSDEK 610
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 EVFIRRYREFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTK--LKHTET 402
EV +E QL+ + Q+K + + + + E K ++ +EN P + L T
Sbjct: 1181 EVSAEPDQESAEFQLEAKKDQDKETIENSEDAKKETVMEKLVSLVENILPVEAVLPSDST 1240
Query: 403 CEKNSLPTKDVIEQEKSA 456
KNS K++ QE S+
Sbjct: 1241 VTKNSEDKKELETQELSS 1258
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 EVFIRRYREFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTK--LKHTET 402
EV +E QL+ + Q+K + + + + E K ++ +EN P + L T
Sbjct: 1181 EVSAEPDQESAEFQLEAKKDQDKETIENSEDAKKETVMEKLVSLVENILPVEAVLPSDST 1240
Query: 403 CEKNSLPTKDVIEQEKSA 456
KNS K++ QE S+
Sbjct: 1241 VTKNSEDKKELETQELSS 1258
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 EVFIRRYREFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTK--LKHTET 402
EV +E QL+ + Q+K + + + + E K ++ +EN P + L T
Sbjct: 1181 EVSAEPDQESAEFQLEAKKDQDKETIENSEDAKKETVMEKLVSLVENILPVEAVLPSDST 1240
Query: 403 CEKNSLPTKDVIEQEKSA 456
KNS K++ QE S+
Sbjct: 1241 VTKNSEDKKELETQELSS 1258
>AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical
protein W03F9.2a protein.
Length = 236
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 274 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFD 375
KHTET+++ P +K A+K N L +E N+D
Sbjct: 192 KHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 24 FYPLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL 203
F P+P + + + P TSP+SP + S++ P VSVTS P ++
Sbjct: 19 FSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSS---STENEPPPVSVTSPPARKRALEES 75
Query: 204 KTSPLRR 224
+P+++
Sbjct: 76 TVTPIQQ 82
>Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical
protein C53A5.9 protein.
Length = 480
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 319 AIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLP 423
AI E++ L+ IE FDP KLK + K +P
Sbjct: 427 AIRGYDEESALLDQIERFDPKKLKWSIVPSKPHVP 461
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 132 SSKASTPAVSVTSTPMKRLCFRLL--KTSPLRRPRSLYSTVSRV*FEPAEAHRDSGEEPA 305
SS AS A SVT T ++ + + + KT P R +SL + PA+ + EEP
Sbjct: 251 SSIASYSAESVTETALESVNTKSVESKTRPSSRRKSLILGAASPLKSPAKIEKPRLEEPE 310
Query: 306 SGQRRYR 326
+R R
Sbjct: 311 QKSKRSR 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,875,951
Number of Sequences: 27780
Number of extensions: 342443
Number of successful extensions: 1124
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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