Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20754
(745 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 31 0.010
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 27 0.21
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 27 0.21
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 2.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 21 7.9
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.9
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 21 7.9
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 31.1 bits (67), Expect = 0.010
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 2 RLIVLFIAFDSNNTLISRFTVTSSVIKHRPRQPCRCE*YKCGD 130
R I L +D + ++ TV S +K R C+C YKCGD
Sbjct: 92 RTITLTHCYDPDGVRLTAETVNSMDVKLREPAECKC--YKCGD 132
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 26.6 bits (56), Expect = 0.21
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 591 PPLVLAPCLRPTT--VGRTCCPQVPWAPLPVLHSLDLLAIRANVFETFSTV 445
P +++ RP T +GR C VP+ L V H+ +L I A FE + +
Sbjct: 123 PTVLVEVNSRPETWVLGREMCKAVPFVELTVAHA-SVLTILAISFERYYAI 172
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 26.6 bits (56), Expect = 0.21
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 591 PPLVLAPCLRPTT--VGRTCCPQVPWAPLPVLHSLDLLAIRANVFETFSTV 445
P +++ RP T +GR C VP+ L V H+ +L I A FE + +
Sbjct: 123 PTVLVEVNSRPETWVLGREMCKAVPFVELTVAHA-SVLTILAISFERYYAI 172
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 412 SACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNP 302
S + + + +PG P RV T+ + S +VY P
Sbjct: 983 SETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPP 1019
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 343 CLLDILDTAGQEEYSAMRDQYMRTGEGF 426
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 343 CLLDILDTAGQEEYSAMRDQYMRTGEGF 426
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 343 CLLDILDTAGQEEYSAMRDQYMRTGEGF 426
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 343 CLLDILDTAGQEEYSAMRDQYMRTGEGF 426
C L +L + EYSA D Y EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 595 KAIMFRSSKHRPKTRMGVDDAFYTLVREIRKDKVSRDKKFKGKKPRHV 738
K I +R+ R+ ++ YTLV+ D + +F KP+ +
Sbjct: 118 KNIKYRNLLETTTRRLAFVNSAYTLVKAYGFDGLDLAWEFPENKPKKI 165
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 342 VFTRHPGHGWP 374
V++RHP WP
Sbjct: 156 VYSRHPYESWP 166
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 185 IYKIFFHTMSRH*KTTPQNHHTCITHI 105
IY IFF +H K C+T++
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYV 203
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,585
Number of Sequences: 336
Number of extensions: 4172
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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