Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20754
(745 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 159 3e-40
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 71 1e-13
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 63 4e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 56 7e-09
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 55 1e-08
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 54 2e-08
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 53 5e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 51 2e-07
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 49 6e-07
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 47 3e-06
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 46 4e-06
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 45 1e-05
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 45 1e-05
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 44 2e-05
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 39 7e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 38 0.002
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 36 0.006
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 0.92
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 26 4.9
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 4.9
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 4.9
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 26 6.5
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 6.5
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 25 8.6
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 8.6
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 159 bits (387), Expect = 3e-40
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 256 QLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLV 435
QLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+LDTAGQEEYSAMR+QYMRTGEGFLLV
Sbjct: 27 QLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLV 86
Query: 436 FAVNSAKSFEDIGSYREQIKRVKDGKRCPWYLWATSATYSRGP*TWR-EHERWRKAIMFR 612
+ + S SF++I ++ +QI RVKD P L A R E E+ K++
Sbjct: 87 YNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCL 146
Query: 613 SSKHRPKTRMGVDDAFYTLVREIRKDKVSRDKKFKGKK 726
+ K R+ V++AFY+LVR IR+ S +K F+ K+
Sbjct: 147 YVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQNKQ 184
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 71.3 bits (167), Expect = 1e-13
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +1
Query: 256 QLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLV 435
Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EYS + ++ G++LV
Sbjct: 25 QYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLV 84
Query: 436 FAVNSAKSFEDIGSYREQI 492
+++ S SFE + R++I
Sbjct: 85 YSITSKSSFEMVKIVRDKI 103
Score = 33.1 bits (72), Expect = 0.043
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 504 GREEVPMVLVGNKCDL-QSWAVDMARAREVAQSYNVPFVETSAKNTHGS*RRF 659
G E VP+V+VGNK DL AV + +A + + E SA++ R F
Sbjct: 108 GTEWVPIVVVGNKSDLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 63.3 bits (147), Expect = 4e-11
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Frame = +1
Query: 265 QNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFA 441
++ F + TI ++ + + +DG+ L I DTAGQE + + Y R G LL++
Sbjct: 31 EDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYD 90
Query: 442 VNSAKSFEDIGSYREQIKRVKDGKRCPWYLWATSATYSRGP*TWREHERWRKAIMFRSSK 621
V KSF+++ ++ +++ + + ++ + + + + +
Sbjct: 91 VTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLE 150
Query: 622 HRPKTRMGVDDAFYTLVREIRKDKVSRDKKFKGK 723
KT + VD+AF+TL REI+K K+ + +F +
Sbjct: 151 ASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
Score = 33.9 bits (74), Expect = 0.025
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 465 RHWLVSRADQASEGREEVPMVLVGNKCDLQSW-AVDMARAREVAQSYNVPFVETSAK-NT 638
R W + ASE V +L+GNKCD + V + + +A V F+E SAK N
Sbjct: 101 RTWFSNVEQHASEN---VYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNV 157
Query: 639 HGS*RRFLHAREGDTQR 689
+ F ARE Q+
Sbjct: 158 NVDEAFFTLAREIKKQK 174
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 55.6 bits (128), Expect = 7e-09
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 QLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLL 432
Q + F +Y TI D K+V++D + L + DTAGQE + ++ + R + +L
Sbjct: 27 QYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVL 86
Query: 433 VFAVNSAKSFEDIGSYREQ 489
V+ VN++KSFE + S+R++
Sbjct: 87 VYDVNNSKSFETLDSWRDE 105
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 54.8 bits (126), Expect = 1e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 268 NHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVN 447
N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R + FL+ F+V
Sbjct: 26 NKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVT 85
Query: 448 SAKSFEDI 471
S SFE++
Sbjct: 86 SPASFENV 93
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 QLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLL 432
Q + F EY TI D K VV+D + L + DTAGQE + ++ + R + ++
Sbjct: 27 QFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVI 86
Query: 433 VFAVNSAKSFEDIGSYREQ 489
V+ VN++KSF+ + ++R++
Sbjct: 87 VYNVNNSKSFDSVENWRQE 105
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 52.8 bits (121), Expect = 5e-08
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 265 QNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 444
+ +F Y+PTI ++Y + +DG + L + DTAGQEEY +R ++ FAV
Sbjct: 35 KGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAV 94
Query: 445 NSAKSFEDI 471
+S S E++
Sbjct: 95 DSRDSLENV 103
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 271 HFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 450
+F EY PT+ ++Y +DG++ L + DTAGQEEY +R L+ FA++S
Sbjct: 32 YFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDS 91
Query: 451 AKSFEDIGS 477
S E++ +
Sbjct: 92 PDSLENVST 100
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 49.2 bits (112), Expect = 6e-07
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 QNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFA 441
+N F E TI + + +V+D + I DTAGQE Y A+ Y R G L+V+
Sbjct: 32 RNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYD 91
Query: 442 VNSAKSFEDIGSYREQIKRVKD 507
+ SF+++G + ++++ D
Sbjct: 92 ITKQSSFDNVGRWLKELREHAD 113
Score = 30.3 bits (65), Expect = 0.30
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 471 WLVSRADQASEGREEVPMVLVGNKCDLQSW-AVDMARAREVAQSYNVPFVETSA 629
WL + A + ++LVGNK DL AV A+ A N+ F+ETSA
Sbjct: 104 WLKELREHADSN---IVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSA 154
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 FVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 450
+ + Y TI ++ + ++G+T L I DTAGQE + + Y R G ++V+ V
Sbjct: 33 YTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTD 92
Query: 451 AKSFEDIGSYREQIKR 498
SF ++ + ++I R
Sbjct: 93 QDSFNNVKQWLQEIDR 108
Score = 42.3 bits (95), Expect = 7e-05
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 465 RHWLVSRADQASEGREEVPMVLVGNKCDL-QSWAVDMARAREVAQSYNVPFVETSAKNTH 641
+ WL A EG V +LVGNK D+ V+ + A+E A S N+PF+ETSAK++
Sbjct: 100 KQWLQEIDRYAVEG---VNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDST 156
Query: 642 GS*RRFL 662
+ FL
Sbjct: 157 NVEQAFL 163
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 46.4 bits (105), Expect = 4e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 274 FVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSA 453
F + Y PT+ ++Y V +DG L + DTAGQE+Y +R L+ FAV+S
Sbjct: 31 FPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSP 90
Query: 454 KSFEDI 471
S +++
Sbjct: 91 DSLDNV 96
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 44.8 bits (101), Expect = 1e-05
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 QLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMRTGEGFL 429
+ +++ F D + TI ++ Q + ID T + L+I DTAGQE Y ++ Y R +
Sbjct: 33 RFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAI 92
Query: 430 LVFAVNSAKSFEDIGSYREQIKR 498
+V+ + A S E S+ ++++R
Sbjct: 93 VVYDITQAASLEKAKSWIKELQR 115
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +1
Query: 256 QLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLLDILDTAGQEEYSAMRDQYMRTGE 420
+ ++N + D+ T+ + +++ G + L I DTAGQE++ ++ Y R
Sbjct: 28 RFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAA 87
Query: 421 GFLLVFAVNSAKSFEDIGSYREQIKRVKDGKRC 519
G +LV+ V + SFE++ S+ I+ + C
Sbjct: 88 GAVLVYDVTNKDSFEELSSWLSDIRAMAPSTIC 120
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 274 FVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSA 453
F + Y PT+ ++Y V +DG L + DTAGQE+Y +R L+ F+V++
Sbjct: 31 FPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAP 90
Query: 454 KSFEDI 471
+S +++
Sbjct: 91 ESLDNV 96
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 259 LIQNHFVDEYDPTIE-----DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEG 423
LI D++D T + D K + ++ T L + DTAGQE + ++ Y+R
Sbjct: 27 LITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSV 86
Query: 424 FLLVFAVNSAKSFEDIGSYREQIK 495
++V+ + + SF + + E ++
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVR 110
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 489 DQASEGREEVPMVLVGNKCDL-QSWAVDMARAREVAQSYNVPFVETSAKNTH 641
D +E ++V +VLVGNK DL V + A+ + +ETSAK H
Sbjct: 108 DVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGH 159
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +1
Query: 334 GETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRV 501
GE C ++ DTAGQE+ +RD Y G+ +++F V S +++++ + + RV
Sbjct: 56 GEICF-NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV 110
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 510 EEVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSAKNTHGS*RRFL 662
E +P+VL GNK D++ V A+A + N+ + + SAK+ + + FL
Sbjct: 112 ENIPIVLCGNKVDVKERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFL 161
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 35.9 bits (79), Expect = 0.006
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 274 FVDEYDPTIEDSYRKQVVIDGETCLLDIL--DTAGQEEYSAMRDQYMRTGEGFLLVFAVN 447
F + Y PT+ ++Y + + ++++ DTAGQEEY +R LL F+++
Sbjct: 39 FPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSID 98
Query: 448 SAKSFEDI 471
S ++
Sbjct: 99 CPASLNNV 106
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 13/55 (23%)
Frame = +3
Query: 519 PMVLVGNKCDLQS-------------WAVDMARAREVAQSYNVPFVETSAKNTHG 644
P+VLVG K DL+ V +A+ VA S N P+VE SAK G
Sbjct: 122 PIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTG 176
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 28.7 bits (61), Expect = 0.92
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 489 DQASEGREEVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSA 629
D + +G + VP VL+GN +S+ A+ S PFV SA
Sbjct: 619 DTSQKGEDGVPGVLIGNNTGRRSFKPSEEAAKLSLPSRKNPFVSDSA 665
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 4.9
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 394 SSPNTLPGQPCPGCRVNTSHRRSRLVYGTNPLSWDRIRPRSDSVSAVSQCGFT 236
SS N P QP G + N ++S L+ T P+ I P+ + + + S+ GFT
Sbjct: 377 SSTNNGP-QPLVGSQ-NEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGFT 427
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 470 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 297
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 388 PNTLPGQPCPGCRVNTSHRRSRLVYGTN 305
P+T P QPC ++ T + R+VY N
Sbjct: 13 PSTKPSQPC---KIGTDFKGERIVYPAN 37
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 653 SSTPMRVFGRCFDERNIIALRHLS 582
+S RVFG FD R IIA H S
Sbjct: 467 NSRNSRVFGLQFDHRRIIACTHSS 490
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 479 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 348
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 515 LFPSFTRLICSRYE--PMSSKLLALLTANTSKNPSPVRMYWS 396
++ T +I RY P S ++ A + TSK S + + WS
Sbjct: 20 IYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWS 61
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 387 RILFLASRVQDVE*T-RLTVDHDLFTVRILYRGIVFVHEVILYQLLVN 247
R+L A V +E T R+T +H + +R ++ V E +Y L+N
Sbjct: 2183 RMLVNAMEVSGIEGTFRITCEHVMRVLRTNKESVMAVLEAFVYDPLIN 2230
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,204,056
Number of Sequences: 5004
Number of extensions: 70840
Number of successful extensions: 245
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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